FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4114, 487 aa 1>>>pF1KE4114 487 - 487 aa - 487 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3354+/-0.000809; mu= 14.8883+/- 0.049 mean_var=154.6763+/-32.589, 0's: 0 Z-trim(112.9): 165 B-trim: 0 in 0/53 Lambda= 0.103125 statistics sampled from 13330 (13562) to 13330 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.764), E-opt: 0.2 (0.417), width: 16 Scan time: 3.110 The best scores are: opt bits E(32554) CCDS34654.1 TRIM50 gene_id:135892|Hs108|chr7 ( 487) 3393 516.7 2.2e-146 CCDS34665.1 TRIM73 gene_id:375593|Hs108|chr7 ( 250) 1578 246.3 2.8e-65 CCDS5545.1 TRIM74 gene_id:378108|Hs108|chr7 ( 250) 1568 244.9 7.8e-65 CCDS32437.1 TRIM72 gene_id:493829|Hs108|chr16 ( 477) 972 156.5 5.8e-38 CCDS34378.1 TRIM39 gene_id:56658|Hs108|chr6 ( 488) 812 132.7 8.7e-31 CCDS376.1 TRIM62 gene_id:55223|Hs108|chr1 ( 475) 779 127.8 2.6e-29 CCDS32220.1 TRIM69 gene_id:140691|Hs108|chr15 ( 500) 759 124.8 2.1e-28 CCDS1636.1 TRIM58 gene_id:25893|Hs108|chr1 ( 486) 615 103.4 5.8e-22 CCDS3808.1 TRIM60 gene_id:166655|Hs108|chr4 ( 471) 612 102.9 7.7e-22 CCDS6056.2 TRIM35 gene_id:23087|Hs108|chr8 ( 493) 596 100.6 4.1e-21 CCDS4568.1 TRIM38 gene_id:10475|Hs108|chr6 ( 465) 581 98.3 1.9e-20 CCDS4462.1 TRIM7 gene_id:81786|Hs108|chr5 ( 511) 564 95.8 1.1e-19 CCDS31356.1 TRIM68 gene_id:55128|Hs108|chr11 ( 485) 558 94.9 2.1e-19 CCDS81297.1 TRIM62 gene_id:55223|Hs108|chr1 ( 354) 548 93.3 4.7e-19 CCDS10114.1 TRIM69 gene_id:140691|Hs108|chr15 ( 341) 538 91.8 1.3e-18 CCDS78121.1 RPP21 gene_id:202658|Hs108|chr6 ( 503) 536 91.7 2e-18 CCDS73719.1 TRIM69 gene_id:140691|Hs108|chr15 ( 296) 530 90.5 2.7e-18 CCDS44525.1 TRIM21 gene_id:6737|Hs108|chr11 ( 475) 518 89.0 1.3e-17 CCDS76745.1 TRIM69 gene_id:140691|Hs108|chr15 ( 263) 504 86.6 3.6e-17 CCDS76746.1 TRIM69 gene_id:140691|Hs108|chr15 ( 279) 504 86.6 3.7e-17 CCDS3851.1 TRIML1 gene_id:339976|Hs108|chr4 ( 468) 498 86.0 9.8e-17 CCDS31048.1 TRIM11 gene_id:81559|Hs108|chr1 ( 468) 497 85.8 1.1e-16 CCDS4466.1 TRIM41 gene_id:90933|Hs108|chr5 ( 630) 481 83.6 6.8e-16 CCDS4677.1 TRIM15 gene_id:89870|Hs108|chr6 ( 465) 479 83.1 6.9e-16 CCDS31393.1 TRIM5 gene_id:85363|Hs108|chr11 ( 493) 467 81.4 2.5e-15 CCDS34375.1 TRIM10 gene_id:10107|Hs108|chr6 ( 481) 460 80.3 5e-15 CCDS4463.1 TRIM7 gene_id:81786|Hs108|chr5 ( 303) 455 79.4 6.2e-15 CCDS43414.1 TRIM7 gene_id:81786|Hs108|chr5 ( 329) 455 79.4 6.5e-15 CCDS34377.1 TRIM39 gene_id:56658|Hs108|chr6 ( 518) 457 79.9 7.2e-15 CCDS53693.1 TRIM64B gene_id:642446|Hs108|chr11 ( 449) 450 78.8 1.3e-14 CCDS475.1 ERMAP gene_id:114625|Hs108|chr1 ( 475) 450 78.8 1.4e-14 CCDS73363.1 TRIM64 gene_id:120146|Hs108|chr11 ( 449) 443 77.8 2.8e-14 CCDS1571.1 TRIM17 gene_id:51127|Hs108|chr1 ( 477) 442 77.7 3.2e-14 CCDS73287.1 TRIM64C gene_id:646754|Hs108|chr11 ( 450) 438 77.0 4.6e-14 CCDS4465.1 TRIM41 gene_id:90933|Hs108|chr5 ( 518) 433 76.4 8.5e-14 CCDS4612.2 BTN3A3 gene_id:10384|Hs108|chr6 ( 535) 424 75.0 2.2e-13 CCDS4611.1 BTN3A3 gene_id:10384|Hs108|chr6 ( 584) 424 75.1 2.3e-13 CCDS47388.1 BTN3A1 gene_id:11119|Hs108|chr6 ( 461) 422 74.7 2.4e-13 CCDS4608.1 BTN3A1 gene_id:11119|Hs108|chr6 ( 513) 422 74.7 2.6e-13 CCDS4614.1 BTN1A1 gene_id:696|Hs108|chr6 ( 526) 421 74.6 3e-13 CCDS4460.2 BTNL9 gene_id:153579|Hs108|chr5 ( 535) 412 73.2 7.6e-13 CCDS60930.1 TRIM49D1 gene_id:399939|Hs108|chr11 ( 452) 399 71.2 2.6e-12 CCDS4654.1 TRIM27 gene_id:5987|Hs108|chr6 ( 513) 398 71.1 3.1e-12 CCDS5678.1 TRIM4 gene_id:89122|Hs108|chr7 ( 474) 387 69.5 9.2e-12 CCDS10498.1 MEFV gene_id:4210|Hs108|chr16 ( 781) 388 69.9 1.2e-11 CCDS55762.1 TRIM49B gene_id:283116|Hs108|chr11 ( 452) 377 68.0 2.5e-11 CCDS31392.1 TRIM5 gene_id:85363|Hs108|chr11 ( 326) 374 67.3 2.8e-11 CCDS31394.1 TRIM5 gene_id:85363|Hs108|chr11 ( 347) 374 67.4 2.9e-11 CCDS13904.1 RFPL3 gene_id:10738|Hs108|chr22 ( 288) 368 66.4 4.7e-11 CCDS43011.1 RFPL3 gene_id:10738|Hs108|chr22 ( 317) 368 66.4 5e-11 >>CCDS34654.1 TRIM50 gene_id:135892|Hs108|chr7 (487 aa) initn: 3393 init1: 3393 opt: 3393 Z-score: 2741.5 bits: 516.7 E(32554): 2.2e-146 Smith-Waterman score: 3393; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487) 10 20 30 40 50 60 pF1KE4 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 DGSSSLPNVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 DGSSSLPNVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 PVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNESDVFSWVIRREFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 PVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNESDVFSWVIRREFQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 ELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHKF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 IRKFHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPEPLKLDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 IRKFHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPEPLKLDP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 ATAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLASRGFSCGRHYWEVVVGSKSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 ATAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLASRGFSCGRHYWEVVVGSKSD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 WRLGVIKGTASRKGKLNRSPEHGVWLIGLKEGRVYEAFACPRVPLPVAGHPHRIGLYLHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 WRLGVIKGTASRKGKLNRSPEHGVWLIGLKEGRVYEAFACPRVPLPVAGHPHRIGLYLHY 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 EQGELTFFDADRPDDLRPLYTFQADFQGKLYPILDTCWHERGSNSLPMVLPPPSGPGPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 EQGELTFFDADRPDDLRPLYTFQADFQGKLYPILDTCWHERGSNSLPMVLPPPSGPGPLS 430 440 450 460 470 480 pF1KE4 PEQPTKL ::::::: CCDS34 PEQPTKL >>CCDS34665.1 TRIM73 gene_id:375593|Hs108|chr7 (250 aa) initn: 1578 init1: 1578 opt: 1578 Z-score: 1285.5 bits: 246.3 E(32554): 2.8e-65 Smith-Waterman score: 1578; 93.2% identity (96.8% similar) in 250 aa overlap (1-250:1-250) 10 20 30 40 50 60 pF1KE4 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV ::::::: ::::::::::::::::: :::::::::::::::::: :::...:::.: :.: CCDS34 MAWQVSLLELEDRLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 DGSSSLPNVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH :::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 DGSSSLPNVSLAWVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 PVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNESDVFSWVIRREFQ :::::::: ::::::::::.::::::::::::::::::.::::::::::::::::::::: CCDS34 PVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRREFQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHKF ::.: :::::::::::::::::::::::::::::::::::::::::::::::::::::.: CCDS34 ELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHEF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 IRKFHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPEPLKLDP : :::::::: CCDS34 IWKFHSMASR 250 >>CCDS5545.1 TRIM74 gene_id:378108|Hs108|chr7 (250 aa) initn: 1568 init1: 1568 opt: 1568 Z-score: 1277.5 bits: 244.9 E(32554): 7.8e-65 Smith-Waterman score: 1568; 92.8% identity (96.4% similar) in 250 aa overlap (1-250:1-250) 10 20 30 40 50 60 pF1KE4 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV ::::::: :::: :::::::::::: :::::::::::::::::: :::...:::.: :.: CCDS55 MAWQVSLLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 DGSSSLPNVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH :::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 DGSSSLPNVSLAWVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 PVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNESDVFSWVIRREFQ :::::::: ::::::::::.::::::::::::::::::.::::::::::::::::::::: CCDS55 PVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRREFQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHKF ::.: :::::::::::::::::::::::::::::::::::::::::::::::::::::.: CCDS55 ELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHEF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 IRKFHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPEPLKLDP : :::::::: CCDS55 IWKFHSMASR 250 >>CCDS32437.1 TRIM72 gene_id:493829|Hs108|chr16 (477 aa) initn: 904 init1: 255 opt: 972 Z-score: 795.0 bits: 156.5 E(32554): 5.8e-38 Smith-Waterman score: 972; 33.8% identity (63.7% similar) in 479 aa overlap (10-475:8-474) 10 20 30 40 50 pF1KE4 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCL--VSLSCHLDAELRCPVCRQ :...:.::.::..: :. .::::.:..:: :. :. . :: :. CCDS32 MSAAPGLLHQELSCPLCLQLFDAPVTAECGHSFCRACLGRVAGEPAADGTVLCPCCQA 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 AVDGSSSLPNVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQ . .. :..:::..:.: :. . : .: .:::..::.:. :.::.:. ::::. CCDS32 PTRPQALSTNLQLARLVEGLAQV--PQGH-CEEHLDPLSIYCEQDRALVCGVCASLGSHR 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 HHPVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNESDVFSWVI--- : . :.. ...:.: .: .:.. . .. .: : .. ... . : .. CCDS32 GHRLLPAAEAHARLKTQLPQQKLQLQEACMRKEKSVAVLEHQLVEVEETVRQFRGAVGEQ 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE4 ----RREFQELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQ : . :. .:.: : : : ..::. ::: : : : :::. CCDS32 LGKMRVFLAALEGSLDREAERVRGEAGVALRRELGSLNSYLEQ-------LRQMEKVLEE 180 190 200 210 220 240 250 260 270 280 290 pF1KE4 FGNEDHHKFIRKFHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLP ... . .:. :. ..:: . :. : :.. : . . :.:. ::...:: ..: CCDS32 VADKPQTEFLMKYCLVTSRLQKILAESPPPARLDIQL-PIISD-DFKFQVWRKMFRALMP 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE4 APEPLKLDPATAHPLLELSKGNTVVQCGLLAQRRASQ-PERFDYSTCVLASRGFSCGRHY : : : .::..::: : .:... :.:. :.. :..:: .. :.: . .: :.:: CCDS32 ALEELTFDPSSAHPSLVVSSSGRRVECSEQKAPPAGEDPRQFDKAVAVVAHQQLSEGEHY 290 300 310 320 330 340 360 370 380 390 400 pF1KE4 WEVVVGSKSDWRLGVIKGTASRKGKLNRSPEHGVWLIGLKEGRVYEAFACPRVPLPVAG- ::: ::.: : :::: . : :.:.:. : .:.::.::.::.. :: . . : . . CCDS32 WEVDVGDKPRWALGVIAAEAPRRGRLHAVPSQGLWLLGLREGKILEAHVEAKEPRALRSP 350 360 370 380 390 400 410 420 430 440 450 460 pF1KE4 --HPHRIGLYLHYEQGELTFFDADRPDDLRPLYTFQADFQGKLYPILDTCWHERGSNSLP .: :::::: . .: :.:.::. : : ::..:. . .::..:.:::..:.:. : CCDS32 ERRPTRIGLYLSFGDGVLSFYDASDADALVPLFAFHERLPRPVYPFFDVCWHDKGKNAQP 410 420 430 440 450 460 470 480 pF1KE4 MVLPPPSGPGPLSPEQPTKL ..: : : CCDS32 LLLVGPEGAEA 470 >>CCDS34378.1 TRIM39 gene_id:56658|Hs108|chr6 (488 aa) initn: 773 init1: 340 opt: 812 Z-score: 666.2 bits: 132.7 E(32554): 8.7e-31 Smith-Waterman score: 812; 29.3% identity (59.6% similar) in 475 aa overlap (6-474:19-485) 10 20 30 40 pF1KE4 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHL .: .:. . .: .::: .:::....:::..::.:.. : CCDS34 MAETSLLEAGASAASTAAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDL 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE4 DAELRCPVCRQAVDGSSSLPNVSLARVIEALRLPGDPEPKV-----CVHHRNPLSLFCEK . .. :::::.. : :: .:. ..: . . :. : .:.. ::::: . CCDS34 ERDFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYE 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE4 DQELICGLCGLLGSHQHHPVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRT ::: .: .:.. .:. : :.:.. . ...::.: . :.:. ... . .. .. CCDS34 DQEAVCLICAISHTHRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKPG 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE4 RIVNESDVFSWVIRREFQELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERL .. . : :::.:::. .:::. : . . . .. : . . :. : CCDS34 ELKRLVESRRQQILREFEELHRRLDEEQQVLLSRLEEEEQDILQRLRENAAHLGDKRRDL 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE4 AQAECVLEQFGNEDHHKFIRKFHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVW :. .: .. .... .: . : ... .: . : .. .. . . . CCDS34 AHLAAEVEGKCLQSGFEMLKDVKSTLEKCE--KVKTMEVTSVSIELEKNFSNFPRQYFAL 250 260 270 280 290 290 300 310 320 330 340 pF1KE4 KRLFRKVLPAPEPLKLDPATAHPLLELSKGNTVVQCGLLAQRR-ASQPERFDYSTCVLAS ........ . ::: :::: : ::. :. : . :.:: . ::::. CCDS34 RKILKQLI---ADVTLDPETAHPNLVLSEDRKSVKFVETRLRDLPDTPRRFTFYPCVLAT 300 310 320 330 340 350 350 360 370 380 390 400 pF1KE4 RGFSCGRHYWEVVVGSKSDWRLGVIKGTASRKGKLNRSPEHGVWLIGLKEGRVYEAFACP .::. ::::::: ::.:. : .:: . ..::::.:. :: : : . : .: : : . : CCDS34 EGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGELTPLPETGYWRVRLWNGDKYAATTTP 360 370 380 390 400 410 410 420 430 440 450 460 pF1KE4 RVPLPVAGHPHRIGLYLHYEQGELTFFDADRPDDLRPLYTFQADFQGKLYPILDTCWHER .:: . .:.:.:..: :: : :.:... : .::: : ::.:.. . CCDS34 FTPLHIKVKPKRVGIFLDYEAGTLSFYNVT---DRSHIYTFTDTFTEKLWPLFYPGIRAG 420 430 440 450 460 470 470 480 pF1KE4 GSNSLPMVLPPPSGPGPLSPEQPTKL .:. :... ::. CCDS34 RKNAAPLTIRPPTDWE 480 >>CCDS376.1 TRIM62 gene_id:55223|Hs108|chr1 (475 aa) initn: 653 init1: 286 opt: 779 Z-score: 639.8 bits: 127.8 E(32554): 2.6e-29 Smith-Waterman score: 779; 30.1% identity (60.9% similar) in 471 aa overlap (10-468:5-468) 10 20 30 40 50 pF1KE4 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAE-LR-CPVCRQ :.:.: : ::: ....:. : : : .:. :.. . .:. : :: ::. CCDS37 MACSLKDELLCSICLSIYQDPVSLGCEHYFCRRCITEHWVRQEAQGARDCPECRR 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 AVDGSSSLPNVSLARVIEALR-LPGDP------EPKVCVHHRNPLSLFCEKDQELICGLC . . :...:: ..: .: : . : : . ..::: :. :.: .: CCDS37 TFAEPALAPSLKLANIVERYSSFPLDAILNARRAARPCQAH-DKVKLFCLTDRALLCFFC 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 GLLGSHQHHPVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNESDVF . :..: :: .. .......:: .. :.. ... : . : . .. . . . CCDS37 DEPALHEQHQVTGIDDAFDELQRELKDQLQALQDSEREHTEALQLLKRQLAETKSSTKSL 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE4 SWVIRREFQELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQ-AQGTRERLAQAECVLE .: . :..::.:. :.. :: . . : .......... .: :. :. . : CCDS37 RTTIGEAFERLHRLLRERQKAMLEELEADTARTLTDIEQKVQRYSQQLRKVQEGAQILQE 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE4 QFGNEDHHKFIRKFHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVL .... :.: :. ..:: .: ... : .. .: . . . .. :.:: ::. . CCDS37 RLAETDRHTFLA---GVASLSERLKGKIHETNLTYEDFPTSKYTGPLQYTIWKSLFQDIH 240 250 260 270 280 290 300 310 320 330 340 pF1KE4 PAPEPLKLDPATAHPLLELSKGNTVVQCG-LLAQRRASQPERFDYSTCVLASRGFSCGRH :.: : :::.::: : :: :.: : : : ..:.::: . ::.:..:: : : CCDS37 PVPAALTLDPGTAHQRLILSDDCTIVAYGNLHPQPLQDSPKRFDVEVSVLGSEAFSSGVH 300 310 320 330 340 350 350 360 370 380 390 400 pF1KE4 YWEVVVGSKSDWRLGVIKGTASRKGKLNRSPEHGVWLIGLKEGRVYEAFACPRVPLPVAG ::::::. :..: .:. . .:::::... .: .: . : ...: : : . : . : : CCDS37 YWEVVVAEKTQWVIGLAHEAASRKGSIQIQPSRGFYCIVMHDGNQYSACTEPWTRLNVRD 360 370 380 390 400 410 410 420 430 440 450 460 pF1KE4 HPHRIGLYLHYEQGELTFFDADRPDDLRPLYTFQADFQGKLYPILDTCW-HERGSNSLPM . ..:..: :.:: : :..:: :. ::::. : ::: .. : :.: :. CCDS37 KLDKVGVFLDYDQGLLIFYNAD---DMSWLYTFREKFPGKLCSYFSPGQSHANGKNVQPL 420 430 440 450 460 470 480 pF1KE4 VLPPPSGPGPLSPEQPTKL CCDS37 RINTVRI 470 >>CCDS32220.1 TRIM69 gene_id:140691|Hs108|chr15 (500 aa) initn: 667 init1: 415 opt: 759 Z-score: 623.5 bits: 124.8 E(32554): 2.1e-28 Smith-Waterman score: 759; 30.6% identity (59.1% similar) in 484 aa overlap (4-472:29-499) 10 20 30 pF1KE4 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSY .: . .. .:.::.: . :..::::.:::.. CCDS32 MEVSTNPSSNIDPGDYVEMNDSITHLPSKVVIQDITMELHCPLCNDWFRDPLMLSCGHNF 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE4 CKGCLVSLSCHLDAELRCPVCRQAVDGSSSLPNVSLARVIEALR-LP---GDPEPKVCVH :..:. .. : :: :.. . .. : : ...: .. :: : :. : . CCDS32 CEACIQDFWRLQAKETFCPECKMLCQYNNCTFNPVLDKLVEKIKKLPLLKGHPQ---CPE 70 80 90 100 110 100 110 120 130 140 pF1KE4 HRNPLSLFCEKDQELICGLC--GLLGSHQHHPVTPVSTVYSRMKEELAALISELKQEQKK : . :.:: . : .::: : . :. : . .: . . :::: ..:. :. CCDS32 HGENLKLFSKPDGKLICFQCKDARLSVGQSKEFLQISDAVHFFTEELAIQQGQLETTLKE 120 130 140 150 160 170 150 160 170 180 190 200 pF1KE4 VDELIAKLVNNRTRIVNESDV-FSWVIRREFQELHHLVDEEKARCLEGIGGHTRGLVASL .. : .. .. .:. . .. . :: .::... .. : . . ..: . CCDS32 LQTL-RNMQKEAIAAHKENKLHLQQHVSMEFLKLHQFLHSKEKDILTELREEGKALNEEM 180 190 200 210 220 230 210 220 230 240 250 260 pF1KE4 DMQLEQAQG----TRERLAQAECVLEQFGNEDHHKFIRKF-HSMASRAEMPQARPLEGAF ...: : : ... :.. . :: .. : : : . ::. . .. .: : CCDS32 ELNLSQLQEQCLLAKDMLVSIQAKTEQQNSFDFLKDITTLLHSLEQGMKVLATREL---- 240 250 260 270 280 290 270 280 290 300 310 320 pF1KE4 SPISFKPGLHQ--ADIKLTVWKRLFRKVLPAPEPLKLDPATAHPLLELSKGNTVVQCGLL :: : .: : . :. ::... . :. :: ::: :::: : :::..: : : . CCDS32 --ISRKLNLGQYKGPIQYMVWREMQDTLCPGLSPLTLDPKTAHPNLVLSKSQTSVWHGDI 300 310 320 330 340 350 330 340 350 360 370 380 pF1KE4 AQRRASQPERFDYSTCVLASRGFSCGRHYWEVVVGSKSDWRLGVIKGTASRKGKLNRSPE . ..::::: :. ::.::::. :. :::: :..:. : .::.. . :::. .:: CCDS32 KKIMPDDPERFDSSVAVLGSRGFTSGKWYWEVEVAKKTKWTVGVVRESIIRKGSCPLTPE 360 370 380 390 400 410 390 400 410 420 430 440 pF1KE4 HGVWLIGLKEGRVYEAFACPRVPLPVAGHPHRIGLYLHYEQGELTFFDADRPDDLRPLYT .: ::. :.. .:. : : .... ..:.:: :: :.:.:..: . .:: CCDS32 QGFWLLRLRNQTDLKALDLPSFSLTLTNNLDKVGIYLDYEGGQLSFYNAK---TMTHIYT 420 430 440 450 460 450 460 470 480 pF1KE4 FQADFQGKLYPILDTCWHERGSNSLPM-VLPPPSGPGPLSPEQPTKL :. :. :::: . : .. : :. :. .: : CCDS32 FSNTFMEKLYPYFCPCLNDGGENKEPLHILHPQ 470 480 490 500 >>CCDS1636.1 TRIM58 gene_id:25893|Hs108|chr1 (486 aa) initn: 680 init1: 404 opt: 615 Z-score: 507.8 bits: 103.4 E(32554): 5.8e-22 Smith-Waterman score: 766; 31.0% identity (57.4% similar) in 491 aa overlap (1-477:1-465) 10 20 30 40 50 pF1KE4 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAE----LRCPVC ::: .:.. .::.::. ..::. ..::::.: :. . . :. :: : CCDS16 MAWAPPGERLREDARCPVCLDFLQEPVSVDCGHSFCLRCISEFCEKSDGAQGGVYACPQC 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 RQAVDGSSSLPNVSLARVIEALR---LPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGL : :. :: .:: ..:..: : . : . :..: . :: :::.:. .: .: CCDS16 RGPFRPSGFRPNRQLAGLVESVRRLGLGAGPGARRCARHGEDLSRFCEEDEAALCWVCDA 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE4 LGSHQHHPVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKL-VNNRTRIVNES-DVF :. : ..:.. . . .. .: . ...: . : : . :...: : .:. .. CCDS16 GPEHRTHRTAPLQEAAGSYQVKLQMALELMRKELE--DALTQEANVGKKTVIWKEKVEMQ 130 140 150 160 170 180 190 200 210 220 230 pF1KE4 SWVIRREFQELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQ .: ::.. . .. .:. : : : : : :.. . .. ::.: .:.. CCDS16 RQRFRLEFEKHRGFLAQEEQRQL-------RRLEAEERATLQRLRESKSRLVQQSKALKE 180 190 200 210 220 230 240 250 260 270 280 pF1KE4 FGNEDHHKFIRKFHSM--ASRAEMPQARP---LEGAFSPISFKPGLHQADIKLTVWKRLF ...: ... : .. . :. . ... ::. :. .: . . ..:. CCDS16 LADELQERCQRPALGLLEGVRGVLSRSKAVTRLEAENIPMELKTACC-----IPGRRELL 240 250 260 270 280 290 300 310 320 330 340 pF1KE4 RKVLPAPEPLKLDPATAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLASRGFSC :: .::::::::: : :. :: : . ..::::: :.:. ..:: CCDS16 RKF---QVDVKLDPATAHPSLLLTADLRSVQDGEPWRDVPNNPERFDTWPCILGLQSFSS 290 300 310 320 330 340 350 360 370 380 390 400 pF1KE4 GRHYWEVVVGSKSDWRLGVIKGTASRKGKLNRSPEHGVWLIGLKEGRVYEAFACPRVPLP :::::::.:: ..: ::: . : :::. . :::.::: . : .: : ..: : ::: CCDS16 GRHYWEVLVGEGAEWGLGVCQDTLPRKGETTPSPENGVWALWLLKGNEYMVLASPSVPLL 350 360 370 380 390 400 410 420 430 440 450 460 pF1KE4 VAGHPHRIGLYLHYEQGELTFFDADRPDDLRPLYTFQADFQGKLYPILDTCWHERGSNSL :. ::..: :: ::..:... : .:::. :.: : : . : .. CCDS16 QLESPRCIGIFLDYEAGEISFYNVT---DGSYIYTFNQLFSGLLRPYFFIC------DAT 410 420 430 440 450 470 480 pF1KE4 PMVLPPPSGPGPLSPEQPTKL :..::: . : CCDS16 PLILPPTTIAGSGNWASRDHLDPASDVRDDHL 460 470 480 >>CCDS3808.1 TRIM60 gene_id:166655|Hs108|chr4 (471 aa) initn: 563 init1: 255 opt: 612 Z-score: 505.6 bits: 102.9 E(32554): 7.7e-22 Smith-Waterman score: 612; 28.0% identity (57.4% similar) in 479 aa overlap (1-468:1-461) 10 20 30 40 50 pF1KE4 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCR--- : . ..: .:... .:::::: .:.:. ..:::..:..:: :: . ::::: CCDS38 MEFVTALVNLQEESSCPICLEYLKDPVTINCGHNFCRSCLSVSWKDLDDTFPCPVCRFCF 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 --QAVDGSSSLPNVS-LARVIEALRLPG--DPEPKVCVHHRNPLSLFCEKDQELICGLCG .. . .: :.. .:. .. : . : .: .: . :.::: :: :..: :. CCDS38 PYKSFRRNPQLRNLTEIAKQLQIRRSKRKRQKENAMCEKHNQFLTLFCVKDLEILCTQCS 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE4 LLGSHQHHPVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNESDVFS . .::.: . :.. . : .: : . . :... ..:...: .. ... .. . CCDS38 FSTKHQKHYICPIKKAASYHREILEGSLEPLRNNIERVEKVIILQGSKSVELKKKVEYKR 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE4 WVIRREFQELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQF : ::.... ....:. :. : . ...:.:. .: . :.. .:... CCDS38 EEINSEFEQIRLFLQNEQEMILRQIQDEEMNILAKLNENLVE-------LSDYVSTLKHL 190 200 210 220 230 240 250 260 270 280 290 pF1KE4 GNEDHHKFIRKFHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTV-WKRLFRKVLP : . : ... . ..:. . . .. : :. : . ..: .. : : . : CCDS38 LREVEGKSVQSNLELLTQAKSMHHK-YQNLKCPELFSFRLTKYGFSLPPQYSGLDRIIKP 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE4 APEPLKLDPATAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLASRGFSCGRHYW . :: :::: : .:. .:. . .:.:: ::.:. :: ::::: CCDS38 FQVDVILDLNTAHPQLLVSEDRKAVRYERKKRNICYDPRRFYVCPAVLGSQRFSSGRHYW 300 310 320 330 340 350 360 370 380 390 400 pF1KE4 EVVVGSKSDWRLGVIKGTASRKGKLNRSPEHGVWLIG--LKEGRVYEAFACPRVPLPVAG :: ::.: : ::: . :. . . : : : :: .: : : . .. :::. CCDS38 EVEVGNKPKWILGVCQDCLLRNWQDQPSVLGGFWAIGRYMKSGYVASGPKTTQL-LPVV- 360 370 380 390 400 410 410 420 430 440 450 460 pF1KE4 HPHRIGLYLHYEQGELTFFDADRPDDLRPLYTFQADFQGKLYPILDTCWHERGSNSLPMV .: .::..: :: :.:.:.. . : ::::. : ..: . : :..: :. CCDS38 KPSKIGIFLDYELGDLSFYNMN---DRSILYTFNDCFTEAVWPYFYT-----GTDSEPLK 420 430 440 450 460 470 480 pF1KE4 LPPPSGPGPLSPEQPTKL CCDS38 ICSVSDSER 470 >>CCDS6056.2 TRIM35 gene_id:23087|Hs108|chr8 (493 aa) initn: 497 init1: 172 opt: 596 Z-score: 492.5 bits: 100.6 E(32554): 4.1e-21 Smith-Waterman score: 596; 28.2% identity (57.1% similar) in 471 aa overlap (10-452:15-462) 10 20 30 40 50 pF1KE4 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPV ....: : .: . :.. . :.:::..:.:: :: .... ::: CCDS60 MERSPDVSPGPSRSFKEELLCAVCYDPFRDAVTLRCGHNFCRGC-VSRCWEVQVSPTCPV 10 20 30 40 50 60 70 80 90 100 pF1KE4 CRQAVDGSSSLPNVSLARVIEAL--------RLPGDPEPKVCVHHRNPLSLFCEKDQELI :.. .. .. : .: ..: : : . .:: ::. ::::: .:.::. CCDS60 CKDRASPADLRTNHTLNNLVEKLLREEAEGARWTSYRFSRVCRLHRGQLSLFCLEDKELL 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE4 CGLCGLLGSHQHHPVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNE : : :: : : ::. . .. . . :... : . . . :... CCDS60 CCSCQADPRHQGHRVQPVKDTAHDFRAKCRNMEHALREKAKA----FWAMRRSYEAIAKH 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE4 SDVFS-WV---IRREFQELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLA ..: . :. ::.::..:.... :. :.... .:: : ...: : :: CCDS60 NQVEAAWLEGRIRQEFDKLREFLRVEEQAILDAMAEETRQKQLLADEKMKQLTEETEVLA 180 190 200 210 220 230 230 240 250 260 270 pF1KE4 QAECVLEQFGNEDHHKFIRKFHSMASRAEMPQARPLEGAFSPISFKPGL------HQADI . :.. .:: .:. : .: . : : .. : .::. . ... CCDS60 HEIERLQMEMKEDDVSFLMKHKS--------RKRRLFCTMEPEPVQPGMLIDVCKYLGSL 240 250 260 270 280 280 290 300 310 320 330 pF1KE4 KLTVWKRLFRKVLPAPEPLKLDPATAHPLLELSKG-NTVVQCGLLAQRRASQPERFDYST . :::... .: .: ...:: :: : .: ..:.. : .: . .::::. . CCDS60 QYRVWKKMLASVESVP--FSFDPNTAAGWLSVSDDLTSVTNHGYRVQ--VENPERFSSAP 290 300 310 320 330 340 340 350 360 370 380 390 pF1KE4 CVLASRGFSCGRHYWEVVVGSKSDWRLGVIK-----GTASRKGKLNRSPEHGVWLIGLKE :.:.:: :: : : :::..:. ..::.::.. :. ... . .. . : : . . CCDS60 CLLGSRVFSQGSHAWEVALGGLQSWRVGVVRVRQDSGAEGHSHSCYHDTRSGFWYVCRTQ 350 360 370 380 390 400 400 410 420 430 440 pF1KE4 GRVYEAFAC----PRVPLPVAGHPHRIGLYLHYEQGELTFFDADRPDDLRPLYTFQADFQ : :. : : . : . :.:. . :. :.:::.:.::.: ::::.: : CCDS60 G--VEGDHCVTSDPATSPLVLAIPRRLRVELECEEGELSFYDAERHCH---LYTFHARF- 410 420 430 440 450 450 460 470 480 pF1KE4 GKLYPILDTCWHERGSNSLPMVLPPPSGPGPLSPEQPTKL :.. : CCDS60 GEVRPYFYLGGARGAGPPEPLRICPLHISVKEELDG 460 470 480 490 487 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 16:33:12 2016 done: Mon Nov 7 16:33:12 2016 Total Scan time: 3.110 Total Display time: 0.080 Function used was FASTA [36.3.4 Apr, 2011]