(Circular) (Six-base) MAPSORT of: pFN21AE3334.seq Check: 7776 from: 1 to: 7609 pFN21AE3334 7609 bp With 182 enzymes: SgfI * July 6, 2012 17:37 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 2273 3430 2273 Size: 1157 6452 AatII G_ACGT'C Cuts at: 278 331 414 600 1536 5419 278 Size: 53 83 186 936 3883 2468 Fragments arranged by size: 3883 2468 936 186 83 53 AccI GT'mk_AC Cuts at: 1937 2042 4952 1937 Size: 105 2910 4594 Fragments arranged by size: 4594 2910 105 Acc65I G'GTAC_C Cuts at: 3500 4930 3500 Size: 1430 6179 AclI AA'CG_TT Cuts at: 1563 3793 5736 6109 1563 Size: 2230 1943 373 3063 Fragments arranged by size: 3063 2230 1943 373 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 1632 2573 2837 4409 4721 4754 5672 7056 7324 Size: 941 264 1572 312 33 918 1384 268 Cuts at: 7324 1632 Size: 1917 Fragments arranged by size: 1917 1572 1384 941 918 312 268 264 33 AfeI AGC'GCT Cuts at: 4361 4361 Size: 7609 AflII C'TTAA_G Cuts at: 820 1017 820 Size: 197 7412 AflIII A'CryG_T Cuts at: 1203 6508 7485 1203 Size: 5305 977 1327 Fragments arranged by size: 5305 1327 977 AgeI A'CCGG_T Cuts at: 6440 6440 Size: 7609 AhdI GACnn_n'nnGTC Cuts at: 2665 6338 2665 Size: 3673 3936 AleI CACnn'nnGTG Cuts at: 1166 1166 Size: 7609 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1184 3912 1184 Size: 2728 4881 AlwNI CAG_nnn'CTG Cuts at: 2869 3224 3474 4651 4699 4732 5352 6924 2869 Size: 355 250 1177 48 33 620 1572 3554 Fragments arranged by size: 3554 1572 1177 620 355 250 48 33 ApaLI G'TGCA_C Cuts at: 5666 6822 5666 Size: 1156 6453 ApoI r'AATT_y Cuts at: 1493 3267 3599 4918 5144 5296 7405 1493 Size: 1774 332 1319 226 152 2109 1697 Fragments arranged by size: 2109 1774 1697 1319 332 226 152 AseI AT'TA_AT Cuts at: 160 1032 6163 160 Size: 872 5131 1606 Fragments arranged by size: 5131 1606 872 AsiSI GCG_AT'CGC Cuts at: 2001 2001 Size: 7609 AvaI C'yCGr_G Cuts at: 1870 1943 2504 2606 3077 4934 1870 Size: 73 561 102 471 1857 4545 Fragments arranged by size: 4545 1857 561 471 102 73 BaeI ACnnnnGTAyCnnnnnnn_nnnnn' Cuts at: 3484 3517 3484 Size: 33 7576 BamHI G'GATC_C Cuts at: 3927 4939 5306 3927 Size: 1012 367 6230 Fragments arranged by size: 6230 1012 367 BanI G'GyrC_C Cuts at: 618 943 1160 1787 2138 3103 3500 3690 4266 Size: 325 217 627 351 965 397 190 576 Cuts at: 4266 4930 6385 618 Size: 664 1455 1842 Fragments arranged by size: 1842 1455 965 664 627 576 397 351 325 217 190 BanII G_rGCy'C Cuts at: 1391 2400 2724 3138 3545 4209 4928 1391 Size: 1009 324 414 407 664 719 4072 Fragments arranged by size: 4072 1009 719 664 414 407 324 BbeI G_GCGC'C Cuts at: 2142 3694 2142 Size: 1552 6057 BbsI GAAGACnn'nnnn_ Cuts at: 928 1899 2561 2967 928 Size: 971 662 406 5570 Fragments arranged by size: 5570 971 662 406 BbvCI CC'TCA_GC Cuts at: 2928 3314 2928 Size: 386 7223 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1903 1937 5800 5834 1903 Size: 34 3863 34 3678 Fragments arranged by size: 3863 3678 34 34 BciVI GTATCCnnnnn_n' Cuts at: 5501 6711 5501 Size: 1210 6399 BclI T'GATC_A Cuts at: 1548 1548 Size: 7609 BfrBI ATG'CAT Cuts at: 3787 3787 Size: 7609 BglI GCCn_nnn'nGGC Cuts at: 136 243 365 436 1067 1672 6220 136 Size: 107 122 71 631 605 4548 1525 Fragments arranged by size: 4548 1525 631 605 122 107 71 BglII A'GATC_T Cuts at: 2473 3332 4164 7604 2473 Size: 859 832 3440 2478 Fragments arranged by size: 3440 2478 859 832 BlpI GC'TnA_GC Cuts at: 3297 4506 4826 5026 3297 Size: 1209 320 200 5880 Fragments arranged by size: 5880 1209 320 200 Bme1580I G_kGCm'C Cuts at: 1790 3231 4847 5670 6826 1790 Size: 1441 1616 823 1156 2573 Fragments arranged by size: 2573 1616 1441 1156 823 BmgBI CAC'GTC Cuts at: 1318 2080 1318 Size: 762 6847 BmrI ACTGGGnnnn_n' Cuts at: 442 858 911 994 1393 1417 2847 3179 5340 Size: 416 53 83 399 24 1430 332 2161 Cuts at: 5340 6298 442 Size: 958 1753 Fragments arranged by size: 2161 1753 1430 958 416 399 332 83 53 24 BmtI G_CTAG'C Cuts at: 1056 1056 Size: 7609 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 3559 3559 Size: 7609 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 1239 2249 2393 2891 3035 3395 3420 3434 3704 Size: 1010 144 498 144 360 25 14 270 Cuts at: 3704 3797 3872 3956 4142 4292 6269 1239 Size: 93 75 84 186 150 1977 2579 Fragments arranged by size: 2579 1977 1010 498 360 270 186 150 144 144 93 84 75 25 14 Bpu10I CC'TnA_GC Cuts at: 2928 3314 2928 Size: 386 7223 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 3569 5734 6599 6897 3569 Size: 2165 865 298 4281 Fragments arranged by size: 4281 2165 865 298 BsaI GGTCTCn'nnnn_ Cuts at: 882 1499 2618 3371 4209 6272 882 Size: 617 1119 753 838 2063 2219 Fragments arranged by size: 2219 2063 1119 838 753 617 BsaAI yAC'GTr Cuts at: 493 1204 5400 493 Size: 711 4196 2702 Fragments arranged by size: 4196 2702 711 BsaBI GATnn'nnATC Cuts at: 2252 7603 2252 Size: 5351 2258 BsaHI Gr'CG_yC Cuts at: 275 328 411 597 1533 2139 2361 2991 3691 Size: 53 83 186 936 606 222 630 700 Cuts at: 3691 5416 5798 6433 275 Size: 1725 382 635 1451 Fragments arranged by size: 1725 1451 936 700 635 630 606 382 222 186 83 53 BsaWI w'CCGG_w Cuts at: 6042 6440 6714 6861 7272 6042 Size: 398 274 147 411 6379 Fragments arranged by size: 6379 411 398 274 147 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 1178 1208 1373 1403 4169 4199 4826 4856 1178 Size: 30 165 30 2766 30 627 30 3931 Fragments arranged by size: 3931 2766 627 165 30 30 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 1186 2234 2237 2999 3025 3095 3686 3929 4073 Size: 1048 3 762 26 70 591 243 144 Cuts at: 4073 4450 4559 4847 1186 Size: 377 109 288 3948 Fragments arranged by size: 3948 1048 762 591 377 288 243 144 109 70 26 3 BseYI C'CCAG_C Cuts at: 2128 3107 3319 3747 4536 6812 7308 2128 Size: 979 212 428 789 2276 496 2429 Fragments arranged by size: 2429 2276 979 789 496 428 212 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 1163 1736 2432 3460 1163 Size: 573 696 1028 5312 Fragments arranged by size: 5312 1028 696 573 BsiEI CG_ry'CG Cuts at: 1540 1815 2001 2968 4760 5059 5820 6848 1540 Size: 275 186 967 1792 299 761 1028 2301 Fragments arranged by size: 2301 1792 1028 967 761 299 275 186 BsiHKAI G_wGCw'C Cuts at: 2079 2724 4065 4209 4251 4686 5670 5755 6826 Size: 645 1341 144 42 435 984 85 1071 Cuts at: 6826 2079 Size: 2862 Fragments arranged by size: 2862 1341 1071 984 645 435 144 85 42 BsmI GAATG_Cn' Cuts at: 5120 5213 5120 Size: 93 7516 BsmBI CGTCTCn'nnnn_ Cuts at: 2168 2168 Size: 7609 Bsp1286I G_dGCh'C Cuts at: 1391 1790 2079 2400 2724 3138 3231 3545 4065 Size: 399 289 321 324 414 93 314 520 Cuts at: 4065 4209 4251 4686 4847 4928 5670 5755 6826 Size: 144 42 435 161 81 742 85 1071 Cuts at: 6826 1391 Size: 2174 Fragments arranged by size: 2174 1071 742 520 435 414 399 324 321 314 289 161 144 93 85 81 42 BspEI T'CCGG_A Cuts at: 7272 7272 Size: 7609 BspHI T'CATG_A Cuts at: 2328 4191 5498 7228 2328 Size: 1863 1307 1730 2709 Fragments arranged by size: 2709 1863 1730 1307 BspMI ACCTGCnnnn'nnnn_ Cuts at: 844 2273 3430 4964 844 Size: 1429 1157 1534 3489 Fragments arranged by size: 3489 1534 1429 1157 BsrBI CCG'CTC Cuts at: 1394 1823 4345 4567 5496 1394 Size: 429 2522 222 929 3507 Fragments arranged by size: 3507 2522 929 429 222 BsrDI GCAATG_nn' Cuts at: 65 1248 6104 6278 65 Size: 1183 4856 174 1396 Fragments arranged by size: 4856 1396 1183 174 BsrFI r'CCGG_y Cuts at: 1700 1810 3354 6253 6440 1700 Size: 110 1544 2899 187 2869 Fragments arranged by size: 2899 2869 1544 187 110 BsrGI T'GTAC_A Cuts at: 96 3570 4464 96 Size: 3474 894 3241 Fragments arranged by size: 3474 3241 894 BssHII G'CGCG_C Cuts at: 1925 1925 Size: 7609 BssSI C'ACGA_G Cuts at: 2717 4316 4589 5669 6681 2717 Size: 1599 273 1080 1012 3645 Fragments arranged by size: 3645 1599 1080 1012 273 BstAPI GCAn_nnn'nTGC Cuts at: 794 3474 3769 4255 4321 4651 794 Size: 2680 295 486 66 330 3752 Fragments arranged by size: 3752 2680 486 330 295 66 BstBI TT'CG_AA Cuts at: 6413 6413 Size: 7609 BstEII G'GTnAC_C Cuts at: 1184 1184 Size: 7609 BstXI CCAn_nnnn'nTGG Cuts at: 2371 3100 3152 2371 Size: 729 52 6828 Fragments arranged by size: 6828 729 52 BstYI r'GATC_y Cuts at: 1972 2253 2473 3161 3332 3927 4164 4428 4783 Size: 281 220 688 171 595 237 264 355 Cuts at: 4783 4939 5306 5691 5708 7160 7246 7258 7604 Size: 156 367 385 17 1452 86 12 346 Cuts at: 7604 1972 Size: 1977 Fragments arranged by size: 1977 1452 688 595 385 367 355 346 281 264 237 220 171 156 86 17 12 BtgI C'CryG_G Cuts at: 513 1065 2004 2355 2994 513 Size: 552 939 351 639 5128 Fragments arranged by size: 5128 939 639 552 351 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 487 1170 1226 487 Size: 683 56 6870 Fragments arranged by size: 6870 683 56 BtsI GCAGTG_nn' Cuts at: 3225 4625 5125 5919 5939 3225 Size: 1400 500 794 20 4895 Fragments arranged by size: 4895 1400 794 500 20 ClaI AT'CG_AT Cuts at: 1554 1554 Size: 7609 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 529 564 529 Size: 35 7574 DraI TTT'AAA Cuts at: 4913 4913 Size: 7609 DrdI GACnn_nn'nnGTC Cuts at: 809 1316 6616 809 Size: 507 5300 1802 Fragments arranged by size: 5300 1802 507 EaeI y'GGCC_r Cuts at: 8 62 1487 1537 1812 1830 2193 2259 2965 Size: 54 1425 50 275 18 363 66 706 Cuts at: 2965 3399 4128 4458 4757 5056 5945 7574 8 Size: 434 729 330 299 299 889 1629 43 Fragments arranged by size: 1629 1425 889 729 706 434 363 330 299 299 275 66 54 50 43 18 EagI C'GGCC_G Cuts at: 1537 1812 2965 4757 5056 1537 Size: 275 1153 1792 299 4090 Fragments arranged by size: 4090 1792 1153 299 275 EarI CTCTTCn'nnn_ Cuts at: 1353 2048 2946 2976 3723 4130 4239 4466 4544 Size: 695 898 30 747 407 109 227 78 Cuts at: 4544 4773 5539 1353 Size: 229 766 3423 Fragments arranged by size: 3423 898 766 747 695 407 229 227 109 78 30 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 387 1451 1589 2012 2072 3039 3920 3940 4853 Size: 1064 138 423 60 967 881 20 913 Cuts at: 4853 6196 6570 6716 387 Size: 1343 374 146 1280 Fragments arranged by size: 1343 1280 1064 967 913 881 423 374 146 138 60 20 EcoICRI GAG'CTC Cuts at: 2722 4207 2722 Size: 1485 6124 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 1239 1632 2249 2393 2573 2837 2891 3035 3395 Size: 393 617 144 180 264 54 144 360 Cuts at: 3395 3420 3434 3704 3797 3872 3956 4142 4292 Size: 25 14 270 93 75 84 186 150 Cuts at: 4292 4409 4721 4754 5672 6269 7056 7324 1239 Size: 117 312 33 918 597 787 268 1524 Fragments arranged by size: 1524 918 787 617 597 393 360 312 270 268 264 186 180 150 144 144 117 93 84 75 54 33 25 14 EcoNI CCTnn'n_nnAGG Cuts at: 3938 3938 Size: 7609 EcoO109I rG'GnC_Cy Cuts at: 2737 3310 3440 3559 4117 4705 2737 Size: 573 130 119 558 588 5641 Fragments arranged by size: 5641 588 573 558 130 119 EcoRI G'AATT_C Cuts at: 3267 4918 5296 3267 Size: 1651 378 5580 Fragments arranged by size: 5580 1651 378 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 3844 3844 Size: 7609 FspI TGC'GCA Cuts at: 4328 6115 4328 Size: 1787 5822 HaeII r_GCGC'y Cuts at: 1678 2142 3372 3694 4363 6756 1678 Size: 464 1230 322 669 2393 2531 Fragments arranged by size: 2531 2393 1230 669 464 322 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 1373 1405 1540 1572 2651 2683 2990 3022 3529 Size: 32 135 32 1079 32 307 32 507 Cuts at: 3529 3561 6250 6282 6324 6356 1373 Size: 32 2689 32 42 32 2626 Fragments arranged by size: 2689 2626 1079 507 307 135 42 32 32 32 32 32 32 32 HincII GTy'rAC Cuts at: 669 1657 1938 4953 5199 669 Size: 988 281 3015 246 3079 Fragments arranged by size: 3079 3015 988 281 246 HindIII A'AGCT_T Cuts at: 748 4751 748 Size: 4003 3606 HpaI GTT'AAC Cuts at: 5199 5199 Size: 7609 KasI G'GCGC_C Cuts at: 2138 3690 2138 Size: 1552 6057 KpnI G_GTAC'C Cuts at: 3504 4934 3504 Size: 1430 6179 MfeI C'AATT_G Cuts at: 5208 5208 Size: 7609 MluI A'CGCG_T Cuts at: 7485 7485 Size: 7609 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 1305 2739 4542 6723 6907 1305 Size: 1434 1803 2181 184 2007 Fragments arranged by size: 2181 2007 1803 1434 184 MscI TGG'CCA Cuts at: 10 64 1489 1832 2261 3401 4130 4460 10 Size: 54 1425 343 429 1140 729 330 3159 Fragments arranged by size: 3159 1425 1140 729 429 343 330 54 MslI CAynn'nnrTG Cuts at: 518 1166 4460 5567 5926 6085 518 Size: 648 3294 1107 359 159 2042 Fragments arranged by size: 3294 2042 1107 648 359 159 MspA1I CmG'CkG Cuts at: 1606 2866 3100 3751 3775 4030 4255 4273 4312 Size: 1260 234 651 24 255 225 18 39 Cuts at: 4312 4387 4505 4651 5025 5702 6850 7095 1606 Size: 75 118 146 374 677 1148 245 2120 Fragments arranged by size: 2120 1260 1148 677 651 374 255 245 234 225 146 118 75 39 24 18 NaeI GCC'GGC Cuts at: 3356 3356 Size: 7609 NarI GG'CG_CC Cuts at: 2139 3691 2139 Size: 1552 6057 NcoI C'CATG_G Cuts at: 513 1065 2004 513 Size: 552 939 6118 Fragments arranged by size: 6118 939 552 NdeI CA'TA_TG Cuts at: 387 387 Size: 7609 NgoMIV G'CCGG_C Cuts at: 3354 3354 Size: 7609 NheI G'CTAG_C Cuts at: 1052 1052 Size: 7609 NotI GC'GGCC_GC Cuts at: 5056 5056 Size: 7609 NsiI A_TGCA'T Cuts at: 3789 3789 Size: 7609 NspI r_CATG'y Cuts at: 1132 1229 4612 4967 6512 1132 Size: 97 3383 355 1545 2229 Fragments arranged by size: 3383 2229 1545 355 97 PasI CC'CwG_GG Cuts at: 1348 2671 1348 Size: 1323 6286 PciI A'CATG_T Cuts at: 6508 6508 Size: 7609 PflMI CCAn_nnn'nTGG Cuts at: 1108 4675 1108 Size: 3567 4042 PmeI GTTT'AAAC Cuts at: 4913 4913 Size: 7609 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 5678 5710 7191 7223 5678 Size: 32 1481 32 6064 Fragments arranged by size: 6064 1481 32 32 PpuMI rG'GwC_Cy Cuts at: 2737 3310 3559 4117 2737 Size: 573 249 558 6229 Fragments arranged by size: 6229 573 558 249 PshAI GACnn'nnGTC Cuts at: 1613 3250 1613 Size: 1637 5972 PsiI TTA'TAA Cuts at: 5179 5179 Size: 7609 PspXI vC'TCGA_Gb Cuts at: 2504 2504 Size: 7609 PstI C_TGCA'G Cuts at: 830 3143 3467 3774 4260 4575 4647 4656 4961 Size: 2313 324 307 486 315 72 9 305 Cuts at: 4961 830 Size: 3478 Fragments arranged by size: 3478 2313 486 324 315 307 305 72 9 PvuI CG_AT'CG Cuts at: 2001 2001 Size: 7609 PvuII CAG'CTG Cuts at: 2866 3751 3775 4255 4273 4387 4505 4651 2866 Size: 885 24 480 18 114 118 146 5824 Fragments arranged by size: 5824 885 480 146 118 114 24 18 SacI G_AGCT'C Cuts at: 2724 4209 2724 Size: 1485 6124 SalI G'TCGA_C Cuts at: 1936 4951 1936 Size: 3015 4594 SapI GCTCTTCn'nnn_ Cuts at: 3723 4239 4466 3723 Size: 516 227 6866 Fragments arranged by size: 6866 516 227 SbfI CC_TGCA'GG Cuts at: 4961 4961 Size: 7609 ScaI AGT'ACT Cuts at: 4301 5857 7569 4301 Size: 1556 1712 4341 Fragments arranged by size: 4341 1712 1556 SexAI A'CCwGG_T Cuts at: 3956 3956 Size: 7609 SfcI C'TryA_G Cuts at: 826 1045 2561 2796 3139 3463 3770 4256 4571 Size: 219 1516 235 343 324 307 486 315 Cuts at: 4571 4643 4652 4888 4957 6092 6773 6964 826 Size: 72 9 236 69 1135 681 191 1471 Fragments arranged by size: 1516 1471 1135 681 486 343 324 315 307 236 235 219 191 72 69 9 SfoI GGC'GCC Cuts at: 2140 3692 2140 Size: 1552 6057 SgfI GCG_AT'CGC Cuts at: 2001 2001 Size: 7609 SgrAI Cr'CCGG_yG Cuts at: 1700 1700 Size: 7609 SmaI CCC'GGG Cuts at: 1872 4936 1872 Size: 3064 4545 SmlI C'TyrA_G Cuts at: 820 1017 1943 2504 3077 3584 5713 6614 6876 Size: 197 926 561 573 507 2129 901 262 Cuts at: 6876 820 Size: 1553 Fragments arranged by size: 2129 1553 926 901 573 561 507 262 197 SnaBI TAC'GTA Cuts at: 493 5400 493 Size: 4907 2702 SpeI A'CTAG_T Cuts at: 152 152 Size: 7609 SphI G_CATG'C Cuts at: 1132 4967 1132 Size: 3835 3774 SspI AAT'ATT Cuts at: 5 52 5533 5 Size: 47 5481 2081 Fragments arranged by size: 5481 2081 47 StuI AGG'CCT Cuts at: 1517 2388 1517 Size: 871 6738 StyI C'CwwG_G Cuts at: 513 1065 2004 2934 3381 5048 513 Size: 552 939 930 447 1667 3074 Fragments arranged by size: 3074 1667 939 930 552 447 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 325 1580 3121 3374 5636 5653 5806 5991 6436 Size: 1255 1541 253 2262 17 153 185 445 Cuts at: 6436 325 Size: 1498 Fragments arranged by size: 2262 1541 1498 1255 445 253 185 153 17 TatI w'GTAC_w Cuts at: 96 370 450 483 534 1977 3570 4299 4464 Size: 274 80 33 51 1443 1593 729 165 Cuts at: 4464 5855 7567 96 Size: 1391 1712 138 Fragments arranged by size: 1712 1593 1443 1391 729 274 165 138 80 51 33 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 4169 4201 4826 4858 7569 7601 4169 Size: 32 625 32 2711 32 4177 Fragments arranged by size: 4177 2711 625 32 32 32 Tth111I GACn'n_nGTC Cuts at: 1316 1316 Size: 7609 XbaI T'CTAG_A Cuts at: 4945 4945 Size: 7609 XcmI CCAnnnn_n'nnnnTGG Cuts at: 3409 3409 Size: 7609 XhoI C'TCGA_G Cuts at: 1943 2504 3077 1943 Size: 561 573 6475 Fragments arranged by size: 6475 573 561 XmaI C'CCGG_G Cuts at: 1870 4934 1870 Size: 3064 4545 XmnI GAAnn'nnTTC Cuts at: 3824 5738 3824 Size: 1914 5695 ZraI GAC'GTC Cuts at: 276 329 412 598 1534 5417 276 Size: 53 83 186 936 3883 2468 Fragments arranged by size: 3883 2468 936 186 83 53 Enzymes that do cut: AarI AatII AccI Acc65I AclI AcuI AfeI AflII AflIII AgeI AhdI AleI AlfI AlwNI ApaLI ApoI AseI AsiSI AvaI BaeI BamHI BanI BanII BbeI BbsI BbvCI BcgI BciVI BclI BfrBI BglI BglII BlpI Bme1580I BmgBI BmrI BmtI BplI BpmI Bpu10I BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI BsmBI Bsp1286I BspEI BspHI BspMI BsrBI BsrDI BsrFI BsrGI BssHII BssSI BstAPI BstBI BstEII BstXI BstYI BtgI BtgZI BtsI ClaI CspCI DraI DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I EcoRI FalI FspI HaeII Hin4I HincII HindIII HpaI KasI KpnI MfeI MluI MmeI MscI MslI MspA1I NaeI NarI NcoI NdeI NgoMIV NheI NotI NsiI NspI PasI PciI PflMI PmeI PpiI PpuMI PshAI PsiI PspXI PstI PvuI PvuII SacI SalI SapI SbfI ScaI SexAI SfcI SfoI SgfI SgrAI SmaI SmlI SnaBI SpeI SphI SspI StuI StyI TaqII TatI TstI Tth111I XbaI XcmI XhoI XmaI XmnI ZraI Enzymes that do not cut: AloI ApaI AscI AvrII BsiWI BstZ17I Bsu36I DraIII EcoRV FseI FspAI NruI PacI PfoI PmlI PspOMI PsrI RsrII SacII SanDI SfiI SrfI SwaI