FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8222, 325 aa 1>>>pF1KB8222 325 - 325 aa - 325 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.5842+/-0.000257; mu= 7.3159+/- 0.016 mean_var=169.4425+/-33.419, 0's: 0 Z-trim(125.5): 2 B-trim: 72 in 1/56 Lambda= 0.098529 statistics sampled from 49450 (49455) to 49450 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.853), E-opt: 0.2 (0.58), width: 16 Scan time: 9.360 The best scores are: opt bits E(85289) NP_056207 (OMIM: 605798) neural proliferation diff ( 325) 2283 335.6 8.8e-92 >>NP_056207 (OMIM: 605798) neural proliferation differen (325 aa) initn: 2283 init1: 2283 opt: 2283 Z-score: 1768.8 bits: 335.6 E(85289): 8.8e-92 Smith-Waterman score: 2283; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:1-325) 10 20 30 40 50 60 pF1KB8 MATPLPPPSPRHLRLLRLLLSGLVLGAALRGAAAGHPDVAACPGSLDCALKRRARCPPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 MATPLPPPSPRHLRLLRLLLSGLVLGAALRGAAAGHPDVAACPGSLDCALKRRARCPPGA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 HACGPCLQPFQEDQQGLCVPRMRRPPGGGRPQPRLEDEIDFLAQELARKESGHSTPPLPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 HACGPCLQPFQEDQQGLCVPRMRRPPGGGRPQPRLEDEIDFLAQELARKESGHSTPPLPK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 DRQRLPEPATLGFSARGQGLELGLPSTPGTPTPTPHTSLGSPVSSDPVHMSPLEPRGGQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 DRQRLPEPATLGFSARGQGLELGLPSTPGTPTPTPHTSLGSPVSSDPVHMSPLEPRGGQG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB8 DGLALVLILAFCVAGAAALSVASLCWCRLQREIRLTQKADYATAKAPGSPAAPRISPGDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 DGLALVLILAFCVAGAAALSVASLCWCRLQREIRLTQKADYATAKAPGSPAAPRISPGDQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB8 RLAQSAEMYHYQHQRQQMLCLERHKEPPKELDTASSDEENEDGDFTVYECPGLAPTGEME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 RLAQSAEMYHYQHQRQQMLCLERHKEPPKELDTASSDEENEDGDFTVYECPGLAPTGEME 250 260 270 280 290 300 310 320 pF1KB8 VRNPLFDHAALSAPLPAPSSPPALP ::::::::::::::::::::::::: NP_056 VRNPLFDHAALSAPLPAPSSPPALP 310 320 325 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 15:57:20 2016 done: Mon Nov 7 15:57:21 2016 Total Scan time: 9.360 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]