FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8222, 325 aa 1>>>pF1KB8222 325 - 325 aa - 325 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.3380+/-0.000609; mu= 9.0693+/- 0.037 mean_var=155.2621+/-30.902, 0's: 0 Z-trim(118.1): 11 B-trim: 0 in 0/52 Lambda= 0.102930 statistics sampled from 18911 (18921) to 18911 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.854), E-opt: 0.2 (0.581), width: 16 Scan time: 3.460 The best scores are: opt bits E(32554) CCDS7024.1 NPDC1 gene_id:56654|Hs108|chr9 ( 325) 2283 349.7 1.9e-96 >>CCDS7024.1 NPDC1 gene_id:56654|Hs108|chr9 (325 aa) initn: 2283 init1: 2283 opt: 2283 Z-score: 1845.1 bits: 349.7 E(32554): 1.9e-96 Smith-Waterman score: 2283; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:1-325) 10 20 30 40 50 60 pF1KB8 MATPLPPPSPRHLRLLRLLLSGLVLGAALRGAAAGHPDVAACPGSLDCALKRRARCPPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 MATPLPPPSPRHLRLLRLLLSGLVLGAALRGAAAGHPDVAACPGSLDCALKRRARCPPGA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 HACGPCLQPFQEDQQGLCVPRMRRPPGGGRPQPRLEDEIDFLAQELARKESGHSTPPLPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 HACGPCLQPFQEDQQGLCVPRMRRPPGGGRPQPRLEDEIDFLAQELARKESGHSTPPLPK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 DRQRLPEPATLGFSARGQGLELGLPSTPGTPTPTPHTSLGSPVSSDPVHMSPLEPRGGQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 DRQRLPEPATLGFSARGQGLELGLPSTPGTPTPTPHTSLGSPVSSDPVHMSPLEPRGGQG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB8 DGLALVLILAFCVAGAAALSVASLCWCRLQREIRLTQKADYATAKAPGSPAAPRISPGDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 DGLALVLILAFCVAGAAALSVASLCWCRLQREIRLTQKADYATAKAPGSPAAPRISPGDQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB8 RLAQSAEMYHYQHQRQQMLCLERHKEPPKELDTASSDEENEDGDFTVYECPGLAPTGEME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 RLAQSAEMYHYQHQRQQMLCLERHKEPPKELDTASSDEENEDGDFTVYECPGLAPTGEME 250 260 270 280 290 300 310 320 pF1KB8 VRNPLFDHAALSAPLPAPSSPPALP ::::::::::::::::::::::::: CCDS70 VRNPLFDHAALSAPLPAPSSPPALP 310 320 325 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 15:57:19 2016 done: Mon Nov 7 15:57:20 2016 Total Scan time: 3.460 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]