FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2182, 181 aa 1>>>pF1KE2182 181 - 181 aa - 181 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.4784+/-0.000344; mu= -0.1024+/- 0.022 mean_var=214.6906+/-42.242, 0's: 0 Z-trim(122.2): 2 B-trim: 539 in 1/51 Lambda= 0.087532 statistics sampled from 39946 (39949) to 39946 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.781), E-opt: 0.2 (0.468), width: 16 Scan time: 6.710 The best scores are: opt bits E(85289) NP_055706 (OMIM: 607075) 28 kDa heat- and acid-sta ( 181) 1160 157.9 8.4e-39 >>NP_055706 (OMIM: 607075) 28 kDa heat- and acid-stable (181 aa) initn: 1160 init1: 1160 opt: 1160 Z-score: 817.6 bits: 157.9 E(85289): 8.4e-39 Smith-Waterman score: 1160; 100.0% identity (100.0% similar) in 181 aa overlap (1-181:1-181) 10 20 30 40 50 60 pF1KE2 MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_055 MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 DESEDEEDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLDLDGPKELSRREREEIEKQKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_055 DESEDEEDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLDLDGPKELSRREREEIEKQKA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 KERYMKMHLAGKTEQAKADLARLAIIRKQREEAARKKEEERKAKDDATLSGKRMQSLSLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_055 KERYMKMHLAGKTEQAKADLARLAIIRKQREEAARKKEEERKAKDDATLSGKRMQSLSLN 130 140 150 160 170 180 pF1KE2 K : NP_055 K 181 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 15:56:11 2016 done: Mon Nov 7 15:56:12 2016 Total Scan time: 6.710 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]