Result of FASTA (omim) for pFN21AB7848
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7848, 622 aa
  1>>>pF1KB7848 622 - 622 aa - 622 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.8944+/-0.000408; mu= 4.6793+/- 0.025
 mean_var=245.8570+/-49.846, 0's: 0 Z-trim(120.6): 12  B-trim: 1912 in 2/50
 Lambda= 0.081796
 statistics sampled from 36057 (36073) to 36057 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.741), E-opt: 0.2 (0.423), width:  16
 Scan time: 12.630

The best scores are:                                      opt bits E(85289)
NP_006464 (OMIM: 602946) TAF6-like RNA polymerase  ( 622) 4210 510.1 8.9e-144
XP_005273771 (OMIM: 602946) PREDICTED: TAF6-like R ( 613) 3220 393.3 1.3e-108
XP_016872589 (OMIM: 602946) PREDICTED: TAF6-like R ( 411) 2400 296.4 1.3e-79
XP_016868057 (OMIM: 602955,617126) PREDICTED: tran ( 667)  320 51.1 1.4e-05
XP_006716164 (OMIM: 602955,617126) PREDICTED: tran ( 667)  320 51.1 1.4e-05
XP_011514845 (OMIM: 602955,617126) PREDICTED: tran ( 667)  320 51.1 1.4e-05
XP_006716165 (OMIM: 602955,617126) PREDICTED: tran ( 667)  320 51.1 1.4e-05
XP_011514844 (OMIM: 602955,617126) PREDICTED: tran ( 667)  320 51.1 1.4e-05
XP_006716163 (OMIM: 602955,617126) PREDICTED: tran ( 677)  320 51.1 1.5e-05
NP_647476 (OMIM: 602955,617126) transcription init ( 677)  320 51.1 1.5e-05
NP_005632 (OMIM: 602955,617126) transcription init ( 677)  320 51.1 1.5e-05
NP_001177344 (OMIM: 602955,617126) transcription i ( 714)  320 51.1 1.5e-05


>>NP_006464 (OMIM: 602946) TAF6-like RNA polymerase II p  (622 aa)
 initn: 4210 init1: 4210 opt: 4210  Z-score: 2702.2  bits: 510.1 E(85289): 8.9e-144
Smith-Waterman score: 4210; 100.0% identity (100.0% similar) in 622 aa overlap (1-622:1-622)

               10        20        30        40        50        60
pF1KB7 MSEREERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQFMKHTKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MSEREERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQFMKHTKR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 RKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAREGELYFPEDREVNLVELALATNIPK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAREGELYFPEDREVNLVELALATNIPK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 GCAETAVRVHVSYLDGKGNLAPQGSVPSAVSSLTDDLLKYYHQVTRAVLGDDPQLMKVAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 GCAETAVRVHVSYLDGKGNLAPQGSVPSAVSSLTDDLLKYYHQVTRAVLGDDPQLMKVAL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 QDLQTNSKIGALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLFRNPHLCLGPYVRCLVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 QDLQTNSKIGALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLFRNPHLCLGPYVRCLVG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 SVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILADP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILADP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 VRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 VRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYG
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 AILVAVERLLKMKAQAAEPNRGGPGGRGCRRLDDLPWDSLLFQESSSGGGAEPSFGSGLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 AILVAVERLLKMKAQAAEPNRGGPGGRGCRRLDDLPWDSLLFQESSSGGGAEPSFGSGLP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB7 LPPGGAGPEDPSLSVTLADIYRELYAFFGDSLATRFGTGQPAPTAPRPPGDKKEPAAAPD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LPPGGAGPEDPSLSVTLADIYRELYAFFGDSLATRFGTGQPAPTAPRPPGDKKEPAAAPD
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB7 SVRKMPQLTASAIVSPHGDESPRGSGGGGPASASGPAASESRPLPRVHRARGAPRQQGPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SVRKMPQLTASAIVSPHGDESPRGSGGGGPASASGPAASESRPLPRVHRARGAPRQQGPG
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB7 TGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPSPASRYVQKLPM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 TGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPSPASRYVQKLPM
              550       560       570       580       590       600

              610       620  
pF1KB7 IGRTSRPARRWALSDYSLYLPL
       ::::::::::::::::::::::
NP_006 IGRTSRPARRWALSDYSLYLPL
              610       620  

>>XP_005273771 (OMIM: 602946) PREDICTED: TAF6-like RNA p  (613 aa)
 initn: 3220 init1: 3220 opt: 3220  Z-score: 2070.9  bits: 393.3 E(85289): 1.3e-108
Smith-Waterman score: 4132; 98.6% identity (98.6% similar) in 622 aa overlap (1-622:1-613)

               10        20        30        40        50        60
pF1KB7 MSEREERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQFMKHTKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSEREERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQFMKHTKR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 RKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAREGELYFPEDREVNLVELALATNIPK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAREGELYFPEDREVNLVELALATNIPK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 GCAETAVRVHVSYLDGKGNLAPQGSVPSAVSSLTDDLLKYYHQVTRAVLGDDPQLMKVAL
       :::::::::::::::::::::::::         ::::::::::::::::::::::::::
XP_005 GCAETAVRVHVSYLDGKGNLAPQGS---------DDLLKYYHQVTRAVLGDDPQLMKVAL
              130       140                150       160       170 

              190       200       210       220       230       240
pF1KB7 QDLQTNSKIGALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLFRNPHLCLGPYVRCLVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QDLQTNSKIGALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLFRNPHLCLGPYVRCLVG
             180       190       200       210       220       230 

              250       260       270       280       290       300
pF1KB7 SVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILADP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILADP
             240       250       260       270       280       290 

              310       320       330       340       350       360
pF1KB7 VRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYG
             300       310       320       330       340       350 

              370       380       390       400       410       420
pF1KB7 AILVAVERLLKMKAQAAEPNRGGPGGRGCRRLDDLPWDSLLFQESSSGGGAEPSFGSGLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AILVAVERLLKMKAQAAEPNRGGPGGRGCRRLDDLPWDSLLFQESSSGGGAEPSFGSGLP
             360       370       380       390       400       410 

              430       440       450       460       470       480
pF1KB7 LPPGGAGPEDPSLSVTLADIYRELYAFFGDSLATRFGTGQPAPTAPRPPGDKKEPAAAPD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LPPGGAGPEDPSLSVTLADIYRELYAFFGDSLATRFGTGQPAPTAPRPPGDKKEPAAAPD
             420       430       440       450       460       470 

              490       500       510       520       530       540
pF1KB7 SVRKMPQLTASAIVSPHGDESPRGSGGGGPASASGPAASESRPLPRVHRARGAPRQQGPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVRKMPQLTASAIVSPHGDESPRGSGGGGPASASGPAASESRPLPRVHRARGAPRQQGPG
             480       490       500       510       520       530 

              550       560       570       580       590       600
pF1KB7 TGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPSPASRYVQKLPM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPSPASRYVQKLPM
             540       550       560       570       580       590 

              610       620  
pF1KB7 IGRTSRPARRWALSDYSLYLPL
       ::::::::::::::::::::::
XP_005 IGRTSRPARRWALSDYSLYLPL
             600       610   

>>XP_016872589 (OMIM: 602946) PREDICTED: TAF6-like RNA p  (411 aa)
 initn: 2395 init1: 2395 opt: 2400  Z-score: 1550.2  bits: 296.4 E(85289): 1.3e-79
Smith-Waterman score: 2400; 93.0% identity (94.8% similar) in 383 aa overlap (241-622:33-411)

              220       230       240        250       260         
pF1KB7 EQLHRLLQVARSLFRNPHLCLGPYVRCLVGSVLY-CVLEPLAASINPLNDHWTLRDGAAL
                                     :::: :    : . . :.. : .   . . 
XP_016 YKYAKVLVLQPSGPRPVTPGSLLHLTPALPSVLYRCY--SLCVVLCPVGWHHASFPSLTE
             10        20        30          40        50        60

     270       280       290       300       310       320         
pF1KB7 LLSHIFWTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVLYPH
         ::   :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WCSH--RTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVLYPH
                 70        80        90       100       110        

     330       340       350       360       370       380         
pF1KB7 LSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVAVERLLKMKAQAAEPNRGGPGGRGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVAVERLLKMKAQAAEPNRGGPGGRGC
      120       130       140       150       160       170        

     390       400       410       420       430       440         
pF1KB7 RRLDDLPWDSLLFQESSSGGGAEPSFGSGLPLPPGGAGPEDPSLSVTLADIYRELYAFFG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RRLDDLPWDSLLFQESSSGGGAEPSFGSGLPLPPGGAGPEDPSLSVTLADIYRELYAFFG
      180       190       200       210       220       230        

     450       460       470       480       490       500         
pF1KB7 DSLATRFGTGQPAPTAPRPPGDKKEPAAAPDSVRKMPQLTASAIVSPHGDESPRGSGGGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSLATRFGTGQPAPTAPRPPGDKKEPAAAPDSVRKMPQLTASAIVSPHGDESPRGSGGGG
      240       250       260       270       280       290        

     510       520       530       540       550       560         
pF1KB7 PASASGPAASESRPLPRVHRARGAPRQQGPGTGTRDVFQKSRFAPRGAPHFRFIIAGRQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PASASGPAASESRPLPRVHRARGAPRQQGPGTGTRDVFQKSRFAPRGAPHFRFIIAGRQA
      300       310       320       330       340       350        

     570       580       590       600       610       620  
pF1KB7 GRRCRGRLFQTAFPAPYGPSPASRYVQKLPMIGRTSRPARRWALSDYSLYLPL
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GRRCRGRLFQTAFPAPYGPSPASRYVQKLPMIGRTSRPARRWALSDYSLYLPL
      360       370       380       390       400       410 

>>XP_016868057 (OMIM: 602955,617126) PREDICTED: transcri  (667 aa)
 initn: 454 init1: 211 opt: 320  Z-score: 220.9  bits: 51.1 E(85289): 1.4e-05
Smith-Waterman score: 396; 23.8% identity (50.1% similar) in 597 aa overlap (34-556:29-605)

            10        20        30        40        50        60   
pF1KB7 REERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKL
                                     : . :..:  : .  ... .::.  ::.::
XP_016   MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTD--EDALKFMHMGKRQKL
                 10        20        30        40          50      

            70        80        90         100       110       120 
pF1KB7 TVEDFNRALRWSSVEAVCGYGSQEALPMRPAREG--ELYFPEDREVNLVELALATNIPK-
       :. :.. ::. ..:: . :. .:: .:.: :  :  :::: :..::.: .. . : .:. 
XP_016 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI-INTPLPRV
         60        70        80        90       100        110     

                                             130                   
pF1KB7 --------------GC-----------------AETAVRVH------------------V
                     ::                 ::..  ..                  .
XP_016 PLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGA
         120       130       140       150       160       170     

             140                150       160       170       180  
pF1KB7 SYLDGKGNL---------APQGSVPSAVSSLTDDLLKYYHQVTRAVLGDDPQLMKVALQD
       .  ::::.          ::    : ..  :. .   ::...:.: .:.       :::.
XP_016 TTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQS
         180       190       200       210       220       230     

            190        200         210       220       230         
pF1KB7 LQTNSKIGALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLFRNPHLCLGPYVRCLV
       . :.  .  .:: : ...  ::.   :...:  :  :......:. :: : :  ::. :.
XP_016 IATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELI
         240       250       260       270       280       290     

     240       250       260       270       280       290         
pF1KB7 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILAD
        .:. :..         ...::.::: :: :...:    .  .... ..:  .. :  .:
XP_016 PAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVD
         300       310       320       330       340       350     

     300       310       320       330       340        350        
pF1KB7 PVRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNA-QVKADGHKV
          :   .::...::  ::  ... .. :.:.     ...:::   .::  .. ::  . 
XP_016 EKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGADHVQS
         360       370       380       390       400       410     

          360       370       380       390        400         410 
pF1KB7 ----YGAILVAVERLLKMKAQAAEPNRGGPGGRGCRRL-DDLPWDSLLFQE--SSSGGGA
           . : ..:  :    . .: . . :. :   : ..       .:  :.   ..   .
XP_016 LLLKHCAPVLAKLRPPPDNQDAYRAEFGSLGPLLCSQVVKARAQAALQAQQVNRTTLTIT
         420       430       440       450       460       470     

             420       430       440       450       460       470 
pF1KB7 EPSFGSGLPLPPGGAGPEDPSLSVTLADIYRELYAFFGDSLATRFGTGQPAPTAPRPPGD
       .:     :   :   ::. :.:  . ..:   . .. .   :        ::  : ::  
XP_016 QPRPTLTLSQAPQ-PGPRTPGLLKVPGSIALPVQTLVSARAA--------APPQPSPPPT
         480        490       500       510               520      

             480       490       500       510       520        530
pF1KB7 KKEPAAAPDSVRKMPQLTASAIVSPHGDESPRGSGGGGPASASGPAASESRPLPR-VHRA
       :    .. .:. .  :. . .  .: .     ::   .:.... :..   .:. . :  :
XP_016 KFIVMSSSSSAPSTQQVLSLSTSAPGS-----GSTTTSPVTTTVPSV---QPIVKLVSTA
        530       540       550            560          570        

               540       550       560       570       580         
pF1KB7 RGAPRQQGP-GTGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPS
         :: . .: : :. . .    . : :                                 
XP_016 TTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPSPLSGSALCGGKQ
      580       590       600       610       620       630        

>>XP_006716164 (OMIM: 602955,617126) PREDICTED: transcri  (667 aa)
 initn: 454 init1: 211 opt: 320  Z-score: 220.9  bits: 51.1 E(85289): 1.4e-05
Smith-Waterman score: 396; 23.8% identity (50.1% similar) in 597 aa overlap (34-556:29-605)

            10        20        30        40        50        60   
pF1KB7 REERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKL
                                     : . :..:  : .  ... .::.  ::.::
XP_006   MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTD--EDALKFMHMGKRQKL
                 10        20        30        40          50      

            70        80        90         100       110       120 
pF1KB7 TVEDFNRALRWSSVEAVCGYGSQEALPMRPAREG--ELYFPEDREVNLVELALATNIPK-
       :. :.. ::. ..:: . :. .:: .:.: :  :  :::: :..::.: .. . : .:. 
XP_006 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI-INTPLPRV
         60        70        80        90       100        110     

                                             130                   
pF1KB7 --------------GC-----------------AETAVRVH------------------V
                     ::                 ::..  ..                  .
XP_006 PLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGA
         120       130       140       150       160       170     

             140                150       160       170       180  
pF1KB7 SYLDGKGNL---------APQGSVPSAVSSLTDDLLKYYHQVTRAVLGDDPQLMKVALQD
       .  ::::.          ::    : ..  :. .   ::...:.: .:.       :::.
XP_006 TTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQS
         180       190       200       210       220       230     

            190        200         210       220       230         
pF1KB7 LQTNSKIGALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLFRNPHLCLGPYVRCLV
       . :.  .  .:: : ...  ::.   :...:  :  :......:. :: : :  ::. :.
XP_006 IATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELI
         240       250       260       270       280       290     

     240       250       260       270       280       290         
pF1KB7 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILAD
        .:. :..         ...::.::: :: :...:    .  .... ..:  .. :  .:
XP_006 PAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVD
         300       310       320       330       340       350     

     300       310       320       330       340        350        
pF1KB7 PVRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNA-QVKADGHKV
          :   .::...::  ::  ... .. :.:.     ...:::   .::  .. ::  . 
XP_006 EKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGADHVQS
         360       370       380       390       400       410     

          360       370       380       390        400         410 
pF1KB7 ----YGAILVAVERLLKMKAQAAEPNRGGPGGRGCRRL-DDLPWDSLLFQE--SSSGGGA
           . : ..:  :    . .: . . :. :   : ..       .:  :.   ..   .
XP_006 LLLKHCAPVLAKLRPPPDNQDAYRAEFGSLGPLLCSQVVKARAQAALQAQQVNRTTLTIT
         420       430       440       450       460       470     

             420       430       440       450       460       470 
pF1KB7 EPSFGSGLPLPPGGAGPEDPSLSVTLADIYRELYAFFGDSLATRFGTGQPAPTAPRPPGD
       .:     :   :   ::. :.:  . ..:   . .. .   :        ::  : ::  
XP_006 QPRPTLTLSQAPQ-PGPRTPGLLKVPGSIALPVQTLVSARAA--------APPQPSPPPT
         480        490       500       510               520      

             480       490       500       510       520        530
pF1KB7 KKEPAAAPDSVRKMPQLTASAIVSPHGDESPRGSGGGGPASASGPAASESRPLPR-VHRA
       :    .. .:. .  :. . .  .: .     ::   .:.... :..   .:. . :  :
XP_006 KFIVMSSSSSAPSTQQVLSLSTSAPGS-----GSTTTSPVTTTVPSV---QPIVKLVSTA
        530       540       550            560          570        

               540       550       560       570       580         
pF1KB7 RGAPRQQGP-GTGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPS
         :: . .: : :. . .    . : :                                 
XP_006 TTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPSPLSGSALCGGKQ
      580       590       600       610       620       630        

>>XP_011514845 (OMIM: 602955,617126) PREDICTED: transcri  (667 aa)
 initn: 454 init1: 211 opt: 320  Z-score: 220.9  bits: 51.1 E(85289): 1.4e-05
Smith-Waterman score: 396; 23.8% identity (50.1% similar) in 597 aa overlap (34-556:29-605)

            10        20        30        40        50        60   
pF1KB7 REERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKL
                                     : . :..:  : .  ... .::.  ::.::
XP_011   MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTD--EDALKFMHMGKRQKL
                 10        20        30        40          50      

            70        80        90         100       110       120 
pF1KB7 TVEDFNRALRWSSVEAVCGYGSQEALPMRPAREG--ELYFPEDREVNLVELALATNIPK-
       :. :.. ::. ..:: . :. .:: .:.: :  :  :::: :..::.: .. . : .:. 
XP_011 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI-INTPLPRV
         60        70        80        90       100        110     

                                             130                   
pF1KB7 --------------GC-----------------AETAVRVH------------------V
                     ::                 ::..  ..                  .
XP_011 PLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGA
         120       130       140       150       160       170     

             140                150       160       170       180  
pF1KB7 SYLDGKGNL---------APQGSVPSAVSSLTDDLLKYYHQVTRAVLGDDPQLMKVALQD
       .  ::::.          ::    : ..  :. .   ::...:.: .:.       :::.
XP_011 TTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQS
         180       190       200       210       220       230     

            190        200         210       220       230         
pF1KB7 LQTNSKIGALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLFRNPHLCLGPYVRCLV
       . :.  .  .:: : ...  ::.   :...:  :  :......:. :: : :  ::. :.
XP_011 IATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELI
         240       250       260       270       280       290     

     240       250       260       270       280       290         
pF1KB7 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILAD
        .:. :..         ...::.::: :: :...:    .  .... ..:  .. :  .:
XP_011 PAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVD
         300       310       320       330       340       350     

     300       310       320       330       340        350        
pF1KB7 PVRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNA-QVKADGHKV
          :   .::...::  ::  ... .. :.:.     ...:::   .::  .. ::  . 
XP_011 EKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGADHVQS
         360       370       380       390       400       410     

          360       370       380       390        400         410 
pF1KB7 ----YGAILVAVERLLKMKAQAAEPNRGGPGGRGCRRL-DDLPWDSLLFQE--SSSGGGA
           . : ..:  :    . .: . . :. :   : ..       .:  :.   ..   .
XP_011 LLLKHCAPVLAKLRPPPDNQDAYRAEFGSLGPLLCSQVVKARAQAALQAQQVNRTTLTIT
         420       430       440       450       460       470     

             420       430       440       450       460       470 
pF1KB7 EPSFGSGLPLPPGGAGPEDPSLSVTLADIYRELYAFFGDSLATRFGTGQPAPTAPRPPGD
       .:     :   :   ::. :.:  . ..:   . .. .   :        ::  : ::  
XP_011 QPRPTLTLSQAPQ-PGPRTPGLLKVPGSIALPVQTLVSARAA--------APPQPSPPPT
         480        490       500       510               520      

             480       490       500       510       520        530
pF1KB7 KKEPAAAPDSVRKMPQLTASAIVSPHGDESPRGSGGGGPASASGPAASESRPLPR-VHRA
       :    .. .:. .  :. . .  .: .     ::   .:.... :..   .:. . :  :
XP_011 KFIVMSSSSSAPSTQQVLSLSTSAPGS-----GSTTTSPVTTTVPSV---QPIVKLVSTA
        530       540       550            560          570        

               540       550       560       570       580         
pF1KB7 RGAPRQQGP-GTGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPS
         :: . .: : :. . .    . : :                                 
XP_011 TTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPSPLSGSALCGGKQ
      580       590       600       610       620       630        

>>XP_006716165 (OMIM: 602955,617126) PREDICTED: transcri  (667 aa)
 initn: 454 init1: 211 opt: 320  Z-score: 220.9  bits: 51.1 E(85289): 1.4e-05
Smith-Waterman score: 396; 23.8% identity (50.1% similar) in 597 aa overlap (34-556:29-605)

            10        20        30        40        50        60   
pF1KB7 REERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKL
                                     : . :..:  : .  ... .::.  ::.::
XP_006   MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTD--EDALKFMHMGKRQKL
                 10        20        30        40          50      

            70        80        90         100       110       120 
pF1KB7 TVEDFNRALRWSSVEAVCGYGSQEALPMRPAREG--ELYFPEDREVNLVELALATNIPK-
       :. :.. ::. ..:: . :. .:: .:.: :  :  :::: :..::.: .. . : .:. 
XP_006 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI-INTPLPRV
         60        70        80        90       100        110     

                                             130                   
pF1KB7 --------------GC-----------------AETAVRVH------------------V
                     ::                 ::..  ..                  .
XP_006 PLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGA
         120       130       140       150       160       170     

             140                150       160       170       180  
pF1KB7 SYLDGKGNL---------APQGSVPSAVSSLTDDLLKYYHQVTRAVLGDDPQLMKVALQD
       .  ::::.          ::    : ..  :. .   ::...:.: .:.       :::.
XP_006 TTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQS
         180       190       200       210       220       230     

            190        200         210       220       230         
pF1KB7 LQTNSKIGALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLFRNPHLCLGPYVRCLV
       . :.  .  .:: : ...  ::.   :...:  :  :......:. :: : :  ::. :.
XP_006 IATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELI
         240       250       260       270       280       290     

     240       250       260       270       280       290         
pF1KB7 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILAD
        .:. :..         ...::.::: :: :...:    .  .... ..:  .. :  .:
XP_006 PAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVD
         300       310       320       330       340       350     

     300       310       320       330       340        350        
pF1KB7 PVRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNA-QVKADGHKV
          :   .::...::  ::  ... .. :.:.     ...:::   .::  .. ::  . 
XP_006 EKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGADHVQS
         360       370       380       390       400       410     

          360       370       380       390        400         410 
pF1KB7 ----YGAILVAVERLLKMKAQAAEPNRGGPGGRGCRRL-DDLPWDSLLFQE--SSSGGGA
           . : ..:  :    . .: . . :. :   : ..       .:  :.   ..   .
XP_006 LLLKHCAPVLAKLRPPPDNQDAYRAEFGSLGPLLCSQVVKARAQAALQAQQVNRTTLTIT
         420       430       440       450       460       470     

             420       430       440       450       460       470 
pF1KB7 EPSFGSGLPLPPGGAGPEDPSLSVTLADIYRELYAFFGDSLATRFGTGQPAPTAPRPPGD
       .:     :   :   ::. :.:  . ..:   . .. .   :        ::  : ::  
XP_006 QPRPTLTLSQAPQ-PGPRTPGLLKVPGSIALPVQTLVSARAA--------APPQPSPPPT
         480        490       500       510               520      

             480       490       500       510       520        530
pF1KB7 KKEPAAAPDSVRKMPQLTASAIVSPHGDESPRGSGGGGPASASGPAASESRPLPR-VHRA
       :    .. .:. .  :. . .  .: .     ::   .:.... :..   .:. . :  :
XP_006 KFIVMSSSSSAPSTQQVLSLSTSAPGS-----GSTTTSPVTTTVPSV---QPIVKLVSTA
        530       540       550            560          570        

               540       550       560       570       580         
pF1KB7 RGAPRQQGP-GTGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPS
         :: . .: : :. . .    . : :                                 
XP_006 TTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPSPLSGSALCGGKQ
      580       590       600       610       620       630        

>>XP_011514844 (OMIM: 602955,617126) PREDICTED: transcri  (667 aa)
 initn: 454 init1: 211 opt: 320  Z-score: 220.9  bits: 51.1 E(85289): 1.4e-05
Smith-Waterman score: 396; 23.8% identity (50.1% similar) in 597 aa overlap (34-556:29-605)

            10        20        30        40        50        60   
pF1KB7 REERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKL
                                     : . :..:  : .  ... .::.  ::.::
XP_011   MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTD--EDALKFMHMGKRQKL
                 10        20        30        40          50      

            70        80        90         100       110       120 
pF1KB7 TVEDFNRALRWSSVEAVCGYGSQEALPMRPAREG--ELYFPEDREVNLVELALATNIPK-
       :. :.. ::. ..:: . :. .:: .:.: :  :  :::: :..::.: .. . : .:. 
XP_011 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI-INTPLPRV
         60        70        80        90       100        110     

                                             130                   
pF1KB7 --------------GC-----------------AETAVRVH------------------V
                     ::                 ::..  ..                  .
XP_011 PLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGA
         120       130       140       150       160       170     

             140                150       160       170       180  
pF1KB7 SYLDGKGNL---------APQGSVPSAVSSLTDDLLKYYHQVTRAVLGDDPQLMKVALQD
       .  ::::.          ::    : ..  :. .   ::...:.: .:.       :::.
XP_011 TTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQS
         180       190       200       210       220       230     

            190        200         210       220       230         
pF1KB7 LQTNSKIGALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLFRNPHLCLGPYVRCLV
       . :.  .  .:: : ...  ::.   :...:  :  :......:. :: : :  ::. :.
XP_011 IATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELI
         240       250       260       270       280       290     

     240       250       260       270       280       290         
pF1KB7 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILAD
        .:. :..         ...::.::: :: :...:    .  .... ..:  .. :  .:
XP_011 PAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVD
         300       310       320       330       340       350     

     300       310       320       330       340        350        
pF1KB7 PVRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNA-QVKADGHKV
          :   .::...::  ::  ... .. :.:.     ...:::   .::  .. ::  . 
XP_011 EKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGADHVQS
         360       370       380       390       400       410     

          360       370       380       390        400         410 
pF1KB7 ----YGAILVAVERLLKMKAQAAEPNRGGPGGRGCRRL-DDLPWDSLLFQE--SSSGGGA
           . : ..:  :    . .: . . :. :   : ..       .:  :.   ..   .
XP_011 LLLKHCAPVLAKLRPPPDNQDAYRAEFGSLGPLLCSQVVKARAQAALQAQQVNRTTLTIT
         420       430       440       450       460       470     

             420       430       440       450       460       470 
pF1KB7 EPSFGSGLPLPPGGAGPEDPSLSVTLADIYRELYAFFGDSLATRFGTGQPAPTAPRPPGD
       .:     :   :   ::. :.:  . ..:   . .. .   :        ::  : ::  
XP_011 QPRPTLTLSQAPQ-PGPRTPGLLKVPGSIALPVQTLVSARAA--------APPQPSPPPT
         480        490       500       510               520      

             480       490       500       510       520        530
pF1KB7 KKEPAAAPDSVRKMPQLTASAIVSPHGDESPRGSGGGGPASASGPAASESRPLPR-VHRA
       :    .. .:. .  :. . .  .: .     ::   .:.... :..   .:. . :  :
XP_011 KFIVMSSSSSAPSTQQVLSLSTSAPGS-----GSTTTSPVTTTVPSV---QPIVKLVSTA
        530       540       550            560          570        

               540       550       560       570       580         
pF1KB7 RGAPRQQGP-GTGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPS
         :: . .: : :. . .    . : :                                 
XP_011 TTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPSPLSGSALCGGKQ
      580       590       600       610       620       630        

>>XP_006716163 (OMIM: 602955,617126) PREDICTED: transcri  (677 aa)
 initn: 506 init1: 211 opt: 320  Z-score: 220.8  bits: 51.1 E(85289): 1.5e-05
Smith-Waterman score: 431; 24.3% identity (50.8% similar) in 596 aa overlap (35-556:38-615)

           10        20        30        40        50        60    
pF1KB7 EERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLT
                                     ::...: ::..: .:.. .::.  ::.:::
XP_006 KLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLT
        10        20        30        40        50        60       

           70        80        90         100       110       120  
pF1KB7 VEDFNRALRWSSVEAVCGYGSQEALPMRPAREG--ELYFPEDREVNLVELALATNIPK--
       . :.. ::. ..:: . :. .:: .:.: :  :  :::: :..::.: .. . : .:.  
XP_006 TSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI-INTPLPRVP
        70        80        90       100       110        120      

                                            130                    
pF1KB7 -------------GC-----------------AETAVRVH------------------VS
                    ::                 ::..  ..                  ..
XP_006 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAT
        130       140       150       160       170       180      

            140                150       160       170       180   
pF1KB7 YLDGKGNL---------APQGSVPSAVSSLTDDLLKYYHQVTRAVLGDDPQLMKVALQDL
         ::::.          ::    : ..  :. .   ::...:.: .:.       :::..
XP_006 TADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSI
        190       200       210       220       230       240      

           190        200         210       220       230       240
pF1KB7 QTNSKIGALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLFRNPHLCLGPYVRCLVG
        :.  .  .:: : ...  ::.   :...:  :  :......:. :: : :  ::. :. 
XP_006 ATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIP
        250       260       270       280       290       300      

              250       260       270       280       290       300
pF1KB7 SVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILADP
       .:. :..         ...::.::: :: :...:    .  .... ..:  .. :  .: 
XP_006 AVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDE
        310       320       330       340       350       360      

              310       320       330       340        350         
pF1KB7 VRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNA-QVKADGHKV-
         :   .::...::  ::  ... .. :.:.     ...:::   .::  .. ::  .  
XP_006 KTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGADHVQSL
        370       380       390       400       410       420      

         360       370       380       390        400         410  
pF1KB7 ---YGAILVAVERLLKMKAQAAEPNRGGPGGRGCRRL-DDLPWDSLLFQE--SSSGGGAE
          . : ..:  :    . .: . . :. :   : ..       .:  :.   ..   ..
XP_006 LLKHCAPVLAKLRPPPDNQDAYRAEFGSLGPLLCSQVVKARAQAALQAQQVNRTTLTITQ
        430       440       450       460       470       480      

            420       430       440       450       460       470  
pF1KB7 PSFGSGLPLPPGGAGPEDPSLSVTLADIYRELYAFFGDSLATRFGTGQPAPTAPRPPGDK
       :     :   :   ::. :.:  . ..:   . .. .   :        ::  : ::  :
XP_006 PRPTLTLSQAPQ-PGPRTPGLLKVPGSIALPVQTLVSARAA--------APPQPSPPPTK
        490        500       510       520               530       

            480       490       500       510       520        530 
pF1KB7 KEPAAAPDSVRKMPQLTASAIVSPHGDESPRGSGGGGPASASGPAASESRPLPR-VHRAR
           .. .:. .  :. . .  .: .     ::   .:.... :..   .:. . :  : 
XP_006 FIVMSSSSSAPSTQQVLSLSTSAPGS-----GSTTTSPVTTTVPSV---QPIVKLVSTAT
       540       550       560            570          580         

              540       550       560       570       580       590
pF1KB7 GAPRQQGP-GTGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPSP
        :: . .: : :. . .    . : :                                  
XP_006 TAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPSPLSGSALCGGKQE
     590       600       610       620       630       640         

>>NP_647476 (OMIM: 602955,617126) transcription initiati  (677 aa)
 initn: 506 init1: 211 opt: 320  Z-score: 220.8  bits: 51.1 E(85289): 1.5e-05
Smith-Waterman score: 431; 24.3% identity (50.8% similar) in 596 aa overlap (35-556:38-615)

           10        20        30        40        50        60    
pF1KB7 EERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLT
                                     ::...: ::..: .:.. .::.  ::.:::
NP_647 KLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLT
        10        20        30        40        50        60       

           70        80        90         100       110       120  
pF1KB7 VEDFNRALRWSSVEAVCGYGSQEALPMRPAREG--ELYFPEDREVNLVELALATNIPK--
       . :.. ::. ..:: . :. .:: .:.: :  :  :::: :..::.: .. . : .:.  
NP_647 TSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI-INTPLPRVP
        70        80        90       100       110        120      

                                            130                    
pF1KB7 -------------GC-----------------AETAVRVH------------------VS
                    ::                 ::..  ..                  ..
NP_647 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAT
        130       140       150       160       170       180      

            140                150       160       170       180   
pF1KB7 YLDGKGNL---------APQGSVPSAVSSLTDDLLKYYHQVTRAVLGDDPQLMKVALQDL
         ::::.          ::    : ..  :. .   ::...:.: .:.       :::..
NP_647 TADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSI
        190       200       210       220       230       240      

           190        200         210       220       230       240
pF1KB7 QTNSKIGALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLFRNPHLCLGPYVRCLVG
        :.  .  .:: : ...  ::.   :...:  :  :......:. :: : :  ::. :. 
NP_647 ATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIP
        250       260       270       280       290       300      

              250       260       270       280       290       300
pF1KB7 SVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILADP
       .:. :..         ...::.::: :: :...:    .  .... ..:  .. :  .: 
NP_647 AVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDE
        310       320       330       340       350       360      

              310       320       330       340        350         
pF1KB7 VRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNA-QVKADGHKV-
         :   .::...::  ::  ... .. :.:.     ...:::   .::  .. ::  .  
NP_647 KTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGADHVQSL
        370       380       390       400       410       420      

         360       370       380       390        400         410  
pF1KB7 ---YGAILVAVERLLKMKAQAAEPNRGGPGGRGCRRL-DDLPWDSLLFQE--SSSGGGAE
          . : ..:  :    . .: . . :. :   : ..       .:  :.   ..   ..
NP_647 LLKHCAPVLAKLRPPPDNQDAYRAEFGSLGPLLCSQVVKARAQAALQAQQVNRTTLTITQ
        430       440       450       460       470       480      

            420       430       440       450       460       470  
pF1KB7 PSFGSGLPLPPGGAGPEDPSLSVTLADIYRELYAFFGDSLATRFGTGQPAPTAPRPPGDK
       :     :   :   ::. :.:  . ..:   . .. .   :        ::  : ::  :
NP_647 PRPTLTLSQAPQ-PGPRTPGLLKVPGSIALPVQTLVSARAA--------APPQPSPPPTK
        490        500       510       520               530       

            480       490       500       510       520        530 
pF1KB7 KEPAAAPDSVRKMPQLTASAIVSPHGDESPRGSGGGGPASASGPAASESRPLPR-VHRAR
           .. .:. .  :. . .  .: .     ::   .:.... :..   .:. . :  : 
NP_647 FIVMSSSSSAPSTQQVLSLSTSAPGS-----GSTTTSPVTTTVPSV---QPIVKLVSTAT
       540       550       560            570          580         

              540       550       560       570       580       590
pF1KB7 GAPRQQGP-GTGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPSP
        :: . .: : :. . .    . : :                                  
NP_647 TAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPSPLSGSALCGGKQE
     590       600       610       620       630       640         




622 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 15:49:28 2016 done: Mon Nov  7 15:49:29 2016
 Total Scan time: 12.630 Total Display time:  0.130

Function used was FASTA [36.3.4 Apr, 2011]
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