FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB7848, 622 aa 1>>>pF1KB7848 622 - 622 aa - 622 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.4809+/-0.00101; mu= 7.3826+/- 0.061 mean_var=223.1552+/-44.994, 0's: 0 Z-trim(113.4): 7 B-trim: 764 in 2/48 Lambda= 0.085856 statistics sampled from 14029 (14033) to 14029 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.751), E-opt: 0.2 (0.431), width: 16 Scan time: 4.360 The best scores are: opt bits E(32554) CCDS8035.1 TAF6L gene_id:10629|Hs108|chr11 ( 622) 4210 534.4 1.7e-151 >>CCDS8035.1 TAF6L gene_id:10629|Hs108|chr11 (622 aa) initn: 4210 init1: 4210 opt: 4210 Z-score: 2833.3 bits: 534.4 E(32554): 1.7e-151 Smith-Waterman score: 4210; 100.0% identity (100.0% similar) in 622 aa overlap (1-622:1-622) 10 20 30 40 50 60 pF1KB7 MSEREERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQFMKHTKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 MSEREERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQFMKHTKR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB7 RKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAREGELYFPEDREVNLVELALATNIPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 RKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAREGELYFPEDREVNLVELALATNIPK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB7 GCAETAVRVHVSYLDGKGNLAPQGSVPSAVSSLTDDLLKYYHQVTRAVLGDDPQLMKVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 GCAETAVRVHVSYLDGKGNLAPQGSVPSAVSSLTDDLLKYYHQVTRAVLGDDPQLMKVAL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB7 QDLQTNSKIGALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLFRNPHLCLGPYVRCLVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 QDLQTNSKIGALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLFRNPHLCLGPYVRCLVG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB7 SVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILADP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 SVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILADP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB7 VRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 VRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB7 AILVAVERLLKMKAQAAEPNRGGPGGRGCRRLDDLPWDSLLFQESSSGGGAEPSFGSGLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 AILVAVERLLKMKAQAAEPNRGGPGGRGCRRLDDLPWDSLLFQESSSGGGAEPSFGSGLP 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB7 LPPGGAGPEDPSLSVTLADIYRELYAFFGDSLATRFGTGQPAPTAPRPPGDKKEPAAAPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 LPPGGAGPEDPSLSVTLADIYRELYAFFGDSLATRFGTGQPAPTAPRPPGDKKEPAAAPD 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB7 SVRKMPQLTASAIVSPHGDESPRGSGGGGPASASGPAASESRPLPRVHRARGAPRQQGPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 SVRKMPQLTASAIVSPHGDESPRGSGGGGPASASGPAASESRPLPRVHRARGAPRQQGPG 490 500 510 520 530 540 550 560 570 580 590 600 pF1KB7 TGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPSPASRYVQKLPM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 TGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPSPASRYVQKLPM 550 560 570 580 590 600 610 620 pF1KB7 IGRTSRPARRWALSDYSLYLPL :::::::::::::::::::::: CCDS80 IGRTSRPARRWALSDYSLYLPL 610 620 622 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 15:49:27 2016 done: Mon Nov 7 15:49:27 2016 Total Scan time: 4.360 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]