FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2414, 151 aa 1>>>pF1KE2414 151 - 151 aa - 151 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.9264+/-0.000736; mu= -0.9727+/- 0.045 mean_var=222.3820+/-44.721, 0's: 0 Z-trim(117.7): 4 B-trim: 0 in 0/55 Lambda= 0.086005 statistics sampled from 18510 (18513) to 18510 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.846), E-opt: 0.2 (0.569), width: 16 Scan time: 2.050 The best scores are: opt bits E(32554) CCDS5526.1 CHCHD2 gene_id:51142|Hs108|chr7 ( 151) 1030 138.5 1.5e-33 CCDS13815.1 CHCHD10 gene_id:400916|Hs108|chr22 ( 142) 517 74.8 2.1e-14 CCDS77659.1 CHCHD10 gene_id:400916|Hs108|chr22 ( 149) 512 74.2 3.3e-14 >>CCDS5526.1 CHCHD2 gene_id:51142|Hs108|chr7 (151 aa) initn: 1030 init1: 1030 opt: 1030 Z-score: 715.7 bits: 138.5 E(32554): 1.5e-33 Smith-Waterman score: 1030; 100.0% identity (100.0% similar) in 151 aa overlap (1-151:1-151) 10 20 30 40 50 60 pF1KE2 MPRGSRSRTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSAVGSSAAAPRQPGLMAQMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 MPRGSRSRTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSAVGSSAAAPRQPGLMAQMA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 TTAAGVAVGSAVGHTLGHAITGGFSGGSNAEPARPDITYQEPQGTQPAQQQQPCLYEIKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 TTAAGVAVGSAVGHTLGHAITGGFSGGSNAEPARPDITYQEPQGTQPAQQQQPCLYEIKQ 70 80 90 100 110 120 130 140 150 pF1KE2 FLECAQNQGDIKLCEGFNEVLKQCRLANGLA ::::::::::::::::::::::::::::::: CCDS55 FLECAQNQGDIKLCEGFNEVLKQCRLANGLA 130 140 150 >>CCDS13815.1 CHCHD10 gene_id:400916|Hs108|chr22 (142 aa) initn: 784 init1: 290 opt: 517 Z-score: 372.1 bits: 74.8 E(32554): 2.1e-14 Smith-Waterman score: 529; 57.2% identity (75.0% similar) in 152 aa overlap (1-151:1-139) 10 20 30 40 50 60 pF1KE2 MPRGSRSRTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSAVGSSAAAPRQPGLMAQMA ::::::: .:: :::: : :: :.::: ::::.. . : ::::::::: CCDS13 MPRGSRSAASR---PASR-P-------AAPSAHPPAHPPPSAAAPAPAPSGQPGLMAQMA 10 20 30 40 70 80 90 100 110 pF1KE2 TTAAGVAVGSAVGHTLGHAITGGFSGGSNAEPARPDITYQEPQGTQPAQQQQ-PCLYEIK ::::::::::::::..: :.::.:::::. ::..: . : : . : :. :: :::. CCDS13 TTAAGVAVGSAVGHVMGSALTGAFSGGSS-EPSQPAVQ-QAPTPAAPQPLQMGPCAYEIR 50 60 70 80 90 100 120 130 140 150 pF1KE2 QFLECAQNQGDIKLCEGFNEVLKQCRLANGLA :::.:. .:.:..:::::.:.::::. .::. CCDS13 QFLDCSTTQSDLSLCEGFSEALKQCKYYHGLSSLP 110 120 130 140 >>CCDS77659.1 CHCHD10 gene_id:400916|Hs108|chr22 (149 aa) initn: 635 init1: 280 opt: 512 Z-score: 368.4 bits: 74.2 E(32554): 3.3e-14 Smith-Waterman score: 524; 55.7% identity (72.2% similar) in 158 aa overlap (1-151:1-146) 10 20 30 40 50 60 pF1KE2 MPRGSRSRTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSAVGSSAAAPRQPGLMAQMA ::::::: .:: :::: : :: :.::: ::::.. . : ::::::::: CCDS77 MPRGSRSAASR---PASR-P-------AAPSAHPPAHPPPSAAAPAPAPSGQPGLMAQMA 10 20 30 40 70 80 90 100 110 pF1KE2 TTAAGVAVGSAVGHTLGHAITGGFSGGSNAEPARPDITYQ---EPQGTQPAQQQQ----P ::::::::::::::..: :.::.:::::. ::..: . ::. :: : : CCDS77 TTAAGVAVGSAVGHVMGSALTGAFSGGSS-EPSQPAVQQPLALYPQAPTPAAPQPLQMGP 50 60 70 80 90 100 120 130 140 150 pF1KE2 CLYEIKQFLECAQNQGDIKLCEGFNEVLKQCRLANGLA : :::.:::.:. .:.:..:::::.:.::::. .::. CCDS77 CAYEIRQFLDCSTTQSDLSLCEGFSEALKQCKYYHGLSSLP 110 120 130 140 151 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 19:03:07 2016 done: Sat Nov 5 19:03:07 2016 Total Scan time: 2.050 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]