FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5726, 711 aa 1>>>pF1KE5726 711 - 711 aa - 711 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 12.4116+/-0.00116; mu= -8.4876+/- 0.070 mean_var=527.7698+/-108.029, 0's: 0 Z-trim(116.2): 34 B-trim: 952 in 1/53 Lambda= 0.055828 statistics sampled from 16824 (16854) to 16824 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.792), E-opt: 0.2 (0.518), width: 16 Scan time: 3.900 The best scores are: opt bits E(32554) CCDS14370.1 USP51 gene_id:158880|Hs108|chrX ( 711) 5006 418.0 2.4e-116 CCDS65260.1 USP27X gene_id:389856|Hs108|chrX ( 438) 2170 189.4 9.7e-48 CCDS42285.1 USP22 gene_id:23326|Hs108|chr17 ( 525) 1944 171.3 3.3e-42 >>CCDS14370.1 USP51 gene_id:158880|Hs108|chrX (711 aa) initn: 5006 init1: 5006 opt: 5006 Z-score: 2202.4 bits: 418.0 E(32554): 2.4e-116 Smith-Waterman score: 5006; 100.0% identity (100.0% similar) in 711 aa overlap (1-711:1-711) 10 20 30 40 50 60 pF1KE5 MAQVRETSLPSGSGVRWISGGGGGASPEEAVEKAGKMEEAAAGATKASSRREAEEMKLEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 MAQVRETSLPSGSGVRWISGGGGGASPEEAVEKAGKMEEAAAGATKASSRREAEEMKLEP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 LQEREPAPEENLTWSSSGGDEKVLPSIPLRCHSSSSPVCPRRKPRPRPQPRARSRSQPGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 LQEREPAPEENLTWSSSGGDEKVLPSIPLRCHSSSSPVCPRRKPRPRPQPRARSRSQPGL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 SAPPPPPARPPPPPPPPPPPAPRPRAWRGSRRRSRPGSRPQTRRSCSGDLDGSGDPGGLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 SAPPPPPARPPPPPPPPPPPAPRPRAWRGSRRRSRPGSRPQTRRSCSGDLDGSGDPGGLG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 DWLLEVEFGQGPTGCSHVESFKVGKNWQKNLRLIYQRFVWSGTPETRKRKAKSCICHVCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 DWLLEVEFGQGPTGCSHVESFKVGKNWQKNLRLIYQRFVWSGTPETRKRKAKSCICHVCS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 THMNRLHSCLSCVFFGCFTEKHIHKHAETKQHHLAVDLYHGVIYCFMCKDYVYDKDIEQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 THMNRLHSCLSCVFFGCFTEKHIHKHAETKQHHLAVDLYHGVIYCFMCKDYVYDKDIEQI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 AKETKEKILRLLTSTSTDVSHQQFMTSGFEDKQSTCETKEQEPKLVKPKKKRRKKSVYTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 AKETKEKILRLLTSTSTDVSHQQFMTSGFEDKQSTCETKEQEPKLVKPKKKRRKKSVYTV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 GLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLCLVCEMSSLFHAMYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 GLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLCLVCEMSSLFHAMYS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 GSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSKDDSGGQEANNPNCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 GSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSKDDSGGQEANNPNCC 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 NCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGSCATFDSQNPERADSTVSRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 NCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGSCATFDSQNPERADSTVSRD 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 DHIPGIPSLTDCLQWFTRPEHLGSSAKIKCNSCQSYQESTKQLTMKKLPIVACFHLKRFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 DHIPGIPSLTDCLQWFTRPEHLGSSAKIKCNSCQSYQESTKQLTMKKLPIVACFHLKRFE 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE5 HVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPTDCVPNENKYSLFAVINHHGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 HVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPTDCVPNENKYSLFAVINHHGT 610 620 630 640 650 660 670 680 690 700 710 pF1KE5 LESGHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFYHKQGLEKD ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 LESGHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFYHKQGLEKD 670 680 690 700 710 >>CCDS65260.1 USP27X gene_id:389856|Hs108|chrX (438 aa) initn: 1891 init1: 1346 opt: 2170 Z-score: 970.5 bits: 189.4 E(32554): 9.7e-48 Smith-Waterman score: 2170; 73.8% identity (88.8% similar) in 427 aa overlap (287-711:1-426) 260 270 280 290 300 310 pF1KE5 CFTEKHIHKHAETKQHHLAVDLYHGVIYCFMCKDYVYDKDIEQIAKETKEKILRLLTSTS ::::::::::::::::: . . :.: .::: CCDS65 MCKDYVYDKDIEQIAKEEQGEALKLQASTS 10 20 30 320 330 340 350 360 370 pF1KE5 TDVSHQQFMTSGFEDKQSTCETKEQEPKLVKPKKKRRK-KSVYTVGLRGLINLGNTCFMN :.::::: . :. .: : :: . : .:. . .::. : .:.::::::::::::::: CCDS65 TEVSHQQCSVPGLGEKFPTWETTKPELELLGHNPRRRRITSSFTIGLRGLINLGNTCFMN 40 50 60 70 80 90 380 390 400 410 420 430 pF1KE5 CIVQALTHIPLLKDFFLSDKHKCIMTSPSLCLVCEMSSLFHAMYSGSRTPHIPYKLLHLI :::::::: :.:.::::::.:.: : :: :::::::::::. .:::. .::.:::::::. CCDS65 CIVQALTHTPILRDFFLSDRHRCEMPSPELCLVCEMSSLFRELYSGNPSPHVPYKLLHLV 100 110 120 130 140 150 440 450 460 470 480 490 pF1KE5 WIHAEHLAGYRQQDAHEFLIAILDVLHRHSKDDSGGQEANNPNCCNCIIDQIFTGGLQSD ::::.:::::::::::::::: ::::::: : :. :. ::::: :::::::::::::::: CCDS65 WIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAANNPNHCNCIIDQIFTGGLQSD 160 170 180 190 200 210 500 510 520 530 540 550 pF1KE5 VTCQACHSVSTTIDPCWDISLDLPGSCATFDSQNPERADSTVSRDDHIPGIPSLTDCLQW :::::::.:::::::::::::::::::..: ..: : .:.:. ..::::: .:::::. CCDS65 VTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGR-ESSVNGESHIPGITTLTDCLRR 220 230 240 250 260 560 570 580 590 600 610 pF1KE5 FTRPEHLGSSAKIKCNSCQSYQESTKQLTMKKLPIVACFHLKRFEHVGKQRRKINTFISF :::::::::::::::.::::::::::::::.:::.:::::.::::: .::::::.:.::: CCDS65 FTRPEHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQRRKITTYISF 270 280 290 300 310 320 620 630 640 650 660 670 pF1KE5 PLELDMTPFLASTKESRMK-EGQPPTDCVPNENKYSLFAVINHHGTLESGHYTSFIRQQK :::::::::.::.:::::. . : ::. ::::::::::.::.:::::::::::::..: CCDS65 PLELDMTPFMASSKESRMNGQLQLPTNSGNNENKYSLFAVVNHQGTLESGHYTSFIRHHK 330 340 350 360 370 380 680 690 700 710 pF1KE5 DQWFSCDDAIITKATIEDLLYSEGYLLFYHKQGLEKD ::::.::::.::::.:.:.: ::::::::::: ::.. CCDS65 DQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLEHESEKVKEMNTQAY 390 400 410 420 430 >>CCDS42285.1 USP22 gene_id:23326|Hs108|chr17 (525 aa) initn: 2548 init1: 1527 opt: 1944 Z-score: 871.2 bits: 171.3 E(32554): 3.3e-42 Smith-Waterman score: 2548; 69.7% identity (85.4% similar) in 528 aa overlap (184-709:12-523) 160 170 180 190 200 210 pF1KE5 SRPGSRPQTRRSCSGDLDGSGDPGGLGDWLLEVEFGQGPTGCSHVESFKVGKNWQKNLRL ...:.. .: ::::. :::: ::..::: CCDS42 MVSRPEPEGEAMDAELAVAPPGCSHLGSFKVD-NWKQNLRA 10 20 30 40 220 230 240 250 260 270 pF1KE5 IYQRFVWSGTPETRKRKAKSCICHVCSTHMNRLHSCLSCVFFGCFTEKHIHKHAETKQHH ::: :::::: :.:::::::::::::..:.::::::: ::::::::.::::.::..:.:. CCDS42 IYQCFVWSGTAEARKRKAKSCICHVCGVHLNRLHSCLYCVFFGCFTKKHIHEHAKAKRHN 50 60 70 80 90 100 280 290 300 310 320 330 pF1KE5 LAVDLYHGVIYCFMCKDYVYDKDIEQIAKETKEKILRLLTSTSTDVSHQQFMTSGFEDKQ ::.::..: ::::.:.::.::::.: :::: ..: .. .: .: CCDS42 LAIDLMYGGIYCFLCQDYIYDKDMEIIAKEEQRKAWKM---------------QGVGEKF 110 120 130 140 340 350 360 370 380 390 pF1KE5 STCETKEQEPKLVKPKKKRRK-KSVYTVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFL :: : ..: .:.: . :::: : :.::::::::::::::::::::::: :::.:::: CCDS42 STWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFL 150 160 170 180 190 200 400 410 420 430 440 450 pF1KE5 SDKHKCIMTSPSLCLVCEMSSLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHE ::.:.: : ::: ::::::::::. .::: :.::::::::::.: ::.:::::.:::::: CCDS42 SDRHRCEMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHE 210 220 230 240 250 260 460 470 480 490 500 510 pF1KE5 FLIAILDVLHRHSKDDSGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCW :::: ::::::: : :..:..::::: ::::::::::::::::::::.::.::::::: : CCDS42 FLIAALDVLHRHCKGDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFW 270 280 290 300 310 320 520 530 540 550 560 570 pF1KE5 DISLDLPGSCATFDSQNPERADSTVSRDDHIPGIPSLTDCLQWFTRPEHLGSSAKIKCNS ::::::::: . : .: ..:. ..:. : .:::::. :::::::::::::::.. CCDS42 DISLDLPGSSTPFWPLSPGSEGNVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSG 330 340 350 360 370 380 580 590 600 610 620 630 pF1KE5 CQSYQESTKQLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESR :.::::::::::::::::::::::::::: .: ::::.:..:::::::::::.::.:::: CCDS42 CHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESR 390 400 410 420 430 440 640 650 660 670 680 690 pF1KE5 MK-EGQPPTDCVPNENKYSLFAVINHHGTLESGHYTSFIRQQKDQWFSCDDAIITKATIE :. . : ::: . :.::::::::.::.::::::::::::::.:::::.:::::::::.:. CCDS42 MNGQYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIK 450 460 470 480 490 500 700 710 pF1KE5 DLLYSEGYLLFYHKQGLEKD :.: ::::::::::: :: CCDS42 DVLDSEGYLLFYHKQFLEYE 510 520 711 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 06:06:50 2016 done: Tue Nov 8 06:06:51 2016 Total Scan time: 3.900 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]