FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6642, 282 aa 1>>>pF1KE6642 282 - 282 aa - 282 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1724+/-0.000919; mu= 16.4294+/- 0.055 mean_var=100.4661+/-19.821, 0's: 0 Z-trim(108.5): 116 B-trim: 3 in 1/50 Lambda= 0.127957 statistics sampled from 10100 (10224) to 10100 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.684), E-opt: 0.2 (0.314), width: 16 Scan time: 2.360 The best scores are: opt bits E(32554) CCDS10250.1 NPTN gene_id:27020|Hs108|chr15 ( 282) 1867 355.0 3.5e-98 CCDS58379.1 NPTN gene_id:27020|Hs108|chr15 ( 278) 1817 345.8 2.1e-95 CCDS10249.1 NPTN gene_id:27020|Hs108|chr15 ( 398) 1679 320.5 1.2e-87 CCDS58380.1 NPTN gene_id:27020|Hs108|chr15 ( 394) 1629 311.2 7.3e-85 CCDS12034.1 BSG gene_id:682|Hs108|chr19 ( 269) 622 125.2 5.2e-29 CCDS12033.1 BSG gene_id:682|Hs108|chr19 ( 385) 612 123.5 2.4e-28 CCDS12032.1 BSG gene_id:682|Hs108|chr19 ( 205) 556 112.8 2e-25 CCDS58635.1 BSG gene_id:682|Hs108|chr19 ( 176) 515 105.2 3.5e-23 >>CCDS10250.1 NPTN gene_id:27020|Hs108|chr15 (282 aa) initn: 1867 init1: 1867 opt: 1867 Z-score: 1876.2 bits: 355.0 E(32554): 3.5e-98 Smith-Waterman score: 1867; 100.0% identity (100.0% similar) in 282 aa overlap (1-282:1-282) 10 20 30 40 50 60 pF1KE6 MSGSSLPSALALSLLLVSGSLLPGPGAAQNEPRIVTSEEVIIRDSPVLPVTLQCNLTSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MSGSSLPSALALSLLLVSGSLLPGPGAAQNEPRIVTSEEVIIRDSPVLPVTLQCNLTSSS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 HTLTYSYWTKNGVELSATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 HTLTYSYWTKNGVELSATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 APDITGHKRSENKNEGQDATMYCKSVGYPHPDWIWRKKENGMPMDIVNTSGRFFIINKEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 APDITGHKRSENKNEGQDATMYCKSVGYPHPDWIWRKKENGMPMDIVNTSGRFFIINKEN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 YTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 YTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVI 190 200 210 220 230 240 250 260 270 280 pF1KE6 IVVYEKRKRPDEVPDDDEPAGPMKTNSTNNHKDKNLRQRNTN :::::::::::::::::::::::::::::::::::::::::: CCDS10 IVVYEKRKRPDEVPDDDEPAGPMKTNSTNNHKDKNLRQRNTN 250 260 270 280 >>CCDS58379.1 NPTN gene_id:27020|Hs108|chr15 (278 aa) initn: 1681 init1: 1681 opt: 1817 Z-score: 1826.4 bits: 345.8 E(32554): 2.1e-95 Smith-Waterman score: 1817; 98.6% identity (98.6% similar) in 282 aa overlap (1-282:1-278) 10 20 30 40 50 60 pF1KE6 MSGSSLPSALALSLLLVSGSLLPGPGAAQNEPRIVTSEEVIIRDSPVLPVTLQCNLTSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 MSGSSLPSALALSLLLVSGSLLPGPGAAQNEPRIVTSEEVIIRDSPVLPVTLQCNLTSSS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 HTLTYSYWTKNGVELSATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 HTLTYSYWTKNGVELSATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 APDITGHKRSENKNEGQDATMYCKSVGYPHPDWIWRKKENGMPMDIVNTSGRFFIINKEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 APDITGHKRSENKNEGQDATMYCKSVGYPHPDWIWRKKENGMPMDIVNTSGRFFIINKEN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 YTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 YTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVI 190 200 210 220 230 240 250 260 270 280 pF1KE6 IVVYEKRKRPDEVPDDDEPAGPMKTNSTNNHKDKNLRQRNTN ::::::::::::::: ::::::::::::::::::::::: CCDS58 IVVYEKRKRPDEVPD----AGPMKTNSTNNHKDKNLRQRNTN 250 260 270 >>CCDS10249.1 NPTN gene_id:27020|Hs108|chr15 (398 aa) initn: 1848 init1: 1679 opt: 1679 Z-score: 1686.8 bits: 320.5 E(32554): 1.2e-87 Smith-Waterman score: 1679; 99.6% identity (100.0% similar) in 252 aa overlap (31-282:147-398) 10 20 30 40 50 60 pF1KE6 MSGSSLPSALALSLLLVSGSLLPGPGAAQNEPRIVTSEEVIIRDSPVLPVTLQCNLTSSS .::::::::::::::::::::::::::::: CCDS10 RASNDPKRNDLRQNPSITWIRAQATISVLQKPRIVTSEEVIIRDSPVLPVTLQCNLTSSS 120 130 140 150 160 170 70 80 90 100 110 120 pF1KE6 HTLTYSYWTKNGVELSATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 HTLTYSYWTKNGVELSATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKA 180 190 200 210 220 230 130 140 150 160 170 180 pF1KE6 APDITGHKRSENKNEGQDATMYCKSVGYPHPDWIWRKKENGMPMDIVNTSGRFFIINKEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 APDITGHKRSENKNEGQDATMYCKSVGYPHPDWIWRKKENGMPMDIVNTSGRFFIINKEN 240 250 260 270 280 290 190 200 210 220 230 240 pF1KE6 YTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 YTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVI 300 310 320 330 340 350 250 260 270 280 pF1KE6 IVVYEKRKRPDEVPDDDEPAGPMKTNSTNNHKDKNLRQRNTN :::::::::::::::::::::::::::::::::::::::::: CCDS10 IVVYEKRKRPDEVPDDDEPAGPMKTNSTNNHKDKNLRQRNTN 360 370 380 390 >>CCDS58380.1 NPTN gene_id:27020|Hs108|chr15 (394 aa) initn: 1662 init1: 1493 opt: 1629 Z-score: 1637.0 bits: 311.2 E(32554): 7.3e-85 Smith-Waterman score: 1629; 98.0% identity (98.4% similar) in 252 aa overlap (31-282:147-394) 10 20 30 40 50 60 pF1KE6 MSGSSLPSALALSLLLVSGSLLPGPGAAQNEPRIVTSEEVIIRDSPVLPVTLQCNLTSSS .::::::::::::::::::::::::::::: CCDS58 RASNDPKRNDLRQNPSITWIRAQATISVLQKPRIVTSEEVIIRDSPVLPVTLQCNLTSSS 120 130 140 150 160 170 70 80 90 100 110 120 pF1KE6 HTLTYSYWTKNGVELSATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 HTLTYSYWTKNGVELSATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKA 180 190 200 210 220 230 130 140 150 160 170 180 pF1KE6 APDITGHKRSENKNEGQDATMYCKSVGYPHPDWIWRKKENGMPMDIVNTSGRFFIINKEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 APDITGHKRSENKNEGQDATMYCKSVGYPHPDWIWRKKENGMPMDIVNTSGRFFIINKEN 240 250 260 270 280 290 190 200 210 220 230 240 pF1KE6 YTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 YTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVI 300 310 320 330 340 350 250 260 270 280 pF1KE6 IVVYEKRKRPDEVPDDDEPAGPMKTNSTNNHKDKNLRQRNTN ::::::::::::::: ::::::::::::::::::::::: CCDS58 IVVYEKRKRPDEVPD----AGPMKTNSTNNHKDKNLRQRNTN 360 370 380 390 >>CCDS12034.1 BSG gene_id:682|Hs108|chr19 (269 aa) initn: 498 init1: 363 opt: 622 Z-score: 634.3 bits: 125.2 E(32554): 5.2e-29 Smith-Waterman score: 622; 38.4% identity (69.2% similar) in 279 aa overlap (10-282:1-269) 10 20 30 40 50 pF1KE6 MSGSSLPSALALSLLLVSG-SLLPGPGAAQNEPRIVTSEEVIIRDSPVLPVTLQCNLTSS .: .:... : .:: ::. . :. : . : .: : :.:..: CCDS12 MAAALFVLLGFALLGTHGASGAAGTVFTTVEDL--GSKIL---LTCSLNDS 10 20 30 40 60 70 80 90 100 110 pF1KE6 SHTLTYSYWTKNGVELSATRKNASNMEYRINKPRAEDS-GEYHCVYHFVSAPKANATIEV . .: : :.:: :. ... :.... ..:. ::: :: :. : ..:.:.. CCDS12 ATEVTGHRWLKGGVVLKEDALPGQKTEFKVD---SDDQWGEYSCV--FLPEPMGTANIQL 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE6 KAAPDITGHKRSENKNEGQDATMYCKSVGYPH-PDWIWRKKENGMPMDIVNTS-GRFFII .. : . . : ::. :::. : . ::: . : :: : : .. ..: : .:::. CCDS12 HGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVS 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE6 NKENYTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIII .... .::.: ::.. :::.:.::.:.. :: ... .:::::::: :::::::.::... CCDS12 SSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLV 170 180 190 200 210 220 240 250 260 270 280 pF1KE6 LVVIIVVYEKRKRPDEVPDDDEP-AGPMKTNSTN-NHKDKNLRQRNTN ::.:: .::::..:..: :::. ..:.:... . : : ::.::::.. CCDS12 LVTIIFIYEKRRKPEDVLDDDDAGSAPLKSSGQHQNDKGKNVRQRNSS 230 240 250 260 >>CCDS12033.1 BSG gene_id:682|Hs108|chr19 (385 aa) initn: 470 init1: 363 opt: 612 Z-score: 622.5 bits: 123.5 E(32554): 2.4e-28 Smith-Waterman score: 612; 40.1% identity (72.2% similar) in 237 aa overlap (50-282:153-385) 20 30 40 50 60 70 pF1KE6 SLLPGPGAAQNEPRIVTSEEVIIRDSPVLPVTLQCNLTSSSHTLTYSYWTKNGVELSATR . : :.:..:. .: : :.:: :. CCDS12 PRVKWVRAQAVVLVLEPGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDA 130 140 150 160 170 180 80 90 100 110 120 130 pF1KE6 KNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDA ... :..... .. ::: :: :. : ..:.:.... : . . : ::. :::. : CCDS12 LPGQKTEFKVDSD--DQWGEYSCV--FLPEPMGTANIQLHGPPRVKAVKSSEHINEGETA 190 200 210 220 230 140 150 160 170 180 190 pF1KE6 TMYCKSVGYPH-PDWIWRKKENGMPMDIVNTS-GRFFIINKENYTELNIVNLQITEDPGE . ::: . : :: : : .. ..: : .:::. .... .::.: ::.. :::. CCDS12 MLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQ 240 250 260 270 280 290 200 210 220 230 240 250 pF1KE6 YECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPDEVPDDD :.::.:.. :: ... .:::::::: :::::::.::...::.:: .::::..:..: ::: CCDS12 YRCNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRRKPEDVLDDD 300 310 320 330 340 350 260 270 280 pF1KE6 EP-AGPMKTNSTN-NHKDKNLRQRNTN . ..:.:... . : : ::.::::.. CCDS12 DAGSAPLKSSGQHQNDKGKNVRQRNSS 360 370 380 >>CCDS12032.1 BSG gene_id:682|Hs108|chr19 (205 aa) initn: 498 init1: 363 opt: 556 Z-score: 569.9 bits: 112.8 E(32554): 2e-25 Smith-Waterman score: 556; 42.6% identity (74.6% similar) in 209 aa overlap (79-282:3-205) 50 60 70 80 90 100 pF1KE6 PVTLQCNLTSSSHTLTYSYWTKNGVELSATRKNASNMEYRINKPRAEDS-GEYHCVYHFV ...:: .: :.. ..:. ::: :: :. CCDS12 MKQSDASPQE-RVD---SDDQWGEYSCV--FL 10 20 110 120 130 140 150 160 pF1KE6 SAPKANATIEVKAAPDITGHKRSENKNEGQDATMYCKSVGYPH-PDWIWRKKENGMPMDI : ..:.:.... : . . : ::. :::. : . ::: . : :: : : .. . CCDS12 PEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKAL 30 40 50 60 70 80 170 180 190 200 210 220 pF1KE6 VNTS-GRFFIINKENYTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLW .: : .:::. .... .::.: ::.. :::.:.::.:.. :: ... .:::::::: :: CCDS12 MNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVRSHLAALW 90 100 110 120 130 140 230 240 250 260 270 280 pF1KE6 PFLGILAEIIILVVIIVVYEKRKRPDEVPDDDEP-AGPMKTNSTN-NHKDKNLRQRNTN :::::.::...::.:: .::::..:..: :::. ..:.:... . : : ::.::::.. CCDS12 PFLGIVAEVLVLVTIIFIYEKRRKPEDVLDDDDAGSAPLKSSGQHQNDKGKNVRQRNSS 150 160 170 180 190 200 >>CCDS58635.1 BSG gene_id:682|Hs108|chr19 (176 aa) initn: 498 init1: 363 opt: 515 Z-score: 529.8 bits: 105.2 E(32554): 3.5e-23 Smith-Waterman score: 515; 44.5% identity (76.3% similar) in 173 aa overlap (114-282:4-176) 90 100 110 120 130 140 pF1KE6 NMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDATMYC :.:.... : . . : ::. :::. : . : CCDS58 MGTANIQLHGPPRVKAVKSSEHINEGETAMLVC 10 20 30 150 160 170 180 190 200 pF1KE6 KSVGYPH-PDWIWRKKENGMPMDIVNTS-GRFFIINKENYTELNIVNLQITEDPGEYECN :: . : :: : : .. ..: : .:::. .... .::.: ::.. :::.:.:: CCDS58 KSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCN 40 50 60 70 80 90 210 220 230 240 250 260 pF1KE6 ATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPDEVPDDDEP-A .:.. :: ... .:::::::: :::::::.::...::.:: .::::..:..: :::. . CCDS58 GTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRRKPEDVLDDDDAGS 100 110 120 130 140 150 270 280 pF1KE6 GPMKTNSTN-NHKDKNLRQRNTN .:.:... . : : ::.::::.. CCDS58 APLKSSGQHQNDKGKNVRQRNSS 160 170 282 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 15:02:36 2016 done: Tue Nov 8 15:02:36 2016 Total Scan time: 2.360 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]