FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6162, 172 aa 1>>>pF1KE6162 172 - 172 aa - 172 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6065+/-0.000551; mu= 12.9727+/- 0.034 mean_var=85.9416+/-17.042, 0's: 0 Z-trim(116.0): 6 B-trim: 230 in 1/49 Lambda= 0.138348 statistics sampled from 16593 (16598) to 16593 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.838), E-opt: 0.2 (0.51), width: 16 Scan time: 2.050 The best scores are: opt bits E(32554) CCDS13613.1 MRAP gene_id:56246|Hs108|chr21 ( 172) 1194 246.6 5.5e-66 CCDS13612.1 MRAP gene_id:56246|Hs108|chr21 ( 102) 448 97.6 2.5e-21 >>CCDS13613.1 MRAP gene_id:56246|Hs108|chr21 (172 aa) initn: 1194 init1: 1194 opt: 1194 Z-score: 1298.1 bits: 246.6 E(32554): 5.5e-66 Smith-Waterman score: 1194; 100.0% identity (100.0% similar) in 172 aa overlap (1-172:1-172) 10 20 30 40 50 60 pF1KE6 MANGTNASAPYYSYEYYLDYLDLIPVDEKKLKAHKHSIVIAFWVSLAAFVVLLFLILLYM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MANGTNASAPYYSYEYYLDYLDLIPVDEKKLKAHKHSIVIAFWVSLAAFVVLLFLILLYM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 SWSASPQMRNSPKHHQTCPWSHGLNLHLCIQKCLPCHREPLATSQAQASSVEPGSRTGPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 SWSASPQMRNSPKHHQTCPWSHGLNLHLCIQKCLPCHREPLATSQAQASSVEPGSRTGPD 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 QPLRQESSSTLPLGGFQTHPTLLWELTLNGGPLVRSKPSEPPPGDRTSQLQS :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 QPLRQESSSTLPLGGFQTHPTLLWELTLNGGPLVRSKPSEPPPGDRTSQLQS 130 140 150 160 170 >>CCDS13612.1 MRAP gene_id:56246|Hs108|chr21 (102 aa) initn: 445 init1: 445 opt: 448 Z-score: 496.5 bits: 97.6 E(32554): 2.5e-21 Smith-Waterman score: 448; 79.8% identity (89.9% similar) in 89 aa overlap (1-85:1-89) 10 20 30 40 50 60 pF1KE6 MANGTNASAPYYSYEYYLDYLDLIPVDEKKLKAHKHSIVIAFWVSLAAFVVLLFLILLYM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MANGTNASAPYYSYEYYLDYLDLIPVDEKKLKAHKHSIVIAFWVSLAAFVVLLFLILLYM 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 SWSASPQMR-NSPK---HHQTCPWSHGLNLHLCIQKCLPCHREPLATSQAQASSVEPGSR :::::::: :. . : .. : ..... CCDS13 SWSASPQMSFNTDESLLHSEVLPQTRAISCDELQAPREEGAA 70 80 90 100 172 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:58:45 2016 done: Tue Nov 8 09:58:46 2016 Total Scan time: 2.050 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]