FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2405, 393 aa 1>>>pF1KE2405 393 - 393 aa - 393 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.3061+/-0.000399; mu= 7.2179+/- 0.025 mean_var=134.2754+/-27.274, 0's: 0 Z-trim(115.2): 167 B-trim: 1140 in 1/59 Lambda= 0.110682 statistics sampled from 25248 (25447) to 25248 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.666), E-opt: 0.2 (0.298), width: 16 Scan time: 9.220 The best scores are: opt bits E(85289) NP_062550 (OMIM: 612597) cytotoxic and regulatory ( 393) 2539 417.1 3.6e-116 XP_011541202 (OMIM: 612597) PREDICTED: cytotoxic a ( 342) 1788 297.2 4e-80 NP_001291711 (OMIM: 612597) cytotoxic and regulato ( 194) 1114 189.4 6.4e-48 XP_016872947 (OMIM: 605686) PREDICTED: cell adhesi ( 402) 320 62.8 1.7e-09 NP_001091987 (OMIM: 605686) cell adhesion molecule ( 414) 320 62.8 1.7e-09 XP_005271551 (OMIM: 605686) PREDICTED: cell adhesi ( 425) 320 62.8 1.8e-09 NP_055148 (OMIM: 605686) cell adhesion molecule 1 ( 442) 320 62.8 1.8e-09 NP_001287974 (OMIM: 605686) cell adhesion molecule ( 443) 320 62.8 1.8e-09 NP_001287973 (OMIM: 605686) cell adhesion molecule ( 453) 320 62.8 1.9e-09 NP_001120645 (OMIM: 609743) cell adhesion molecule ( 398) 319 62.6 1.9e-09 NP_001287972 (OMIM: 605686) cell adhesion molecule ( 471) 320 62.8 1.9e-09 XP_016872946 (OMIM: 605686) PREDICTED: cell adhesi ( 477) 320 62.8 1.9e-09 NP_067012 (OMIM: 609743) cell adhesion molecule 3 ( 432) 319 62.7 2e-09 XP_006713145 (OMIM: 609938) PREDICTED: cell adhesi ( 395) 295 58.8 2.6e-08 XP_016861552 (OMIM: 609938) PREDICTED: cell adhesi ( 397) 295 58.8 2.6e-08 NP_001161147 (OMIM: 609938) cell adhesion molecule ( 404) 295 58.8 2.7e-08 NP_001161146 (OMIM: 609938) cell adhesion molecule ( 435) 295 58.8 2.9e-08 XP_006713144 (OMIM: 609938) PREDICTED: cell adhesi ( 435) 295 58.8 2.9e-08 NP_694854 (OMIM: 609938) cell adhesion molecule 2 ( 437) 295 58.8 2.9e-08 XP_016861551 (OMIM: 609938) PREDICTED: cell adhesi ( 449) 295 58.8 2.9e-08 NP_001333439 (OMIM: 609743) cell adhesion molecule ( 352) 282 56.7 1e-07 XP_005258677 (OMIM: 609744) PREDICTED: cell adhesi ( 345) 223 47.3 6.8e-05 NP_660339 (OMIM: 609744) cell adhesion molecule 4 ( 388) 223 47.3 7.5e-05 XP_016881941 (OMIM: 609744) PREDICTED: cell adhesi ( 369) 216 46.2 0.00016 NP_002329 (OMIM: 603241) limbic system-associated ( 338) 204 44.2 0.00055 XP_011511142 (OMIM: 603241) PREDICTED: limbic syst ( 344) 204 44.2 0.00056 XP_016861872 (OMIM: 603241) PREDICTED: limbic syst ( 350) 204 44.2 0.00057 NP_001305844 (OMIM: 603241) limbic system-associat ( 361) 204 44.2 0.00058 XP_016873354 (OMIM: 607938) PREDICTED: neurotrimin ( 326) 194 42.6 0.0016 XP_005245362 (OMIM: 607428) PREDICTED: kin of IRRE ( 773) 200 43.8 0.0017 NP_001041674 (OMIM: 607938) neurotrimin isoform 2 ( 344) 194 42.6 0.0017 XP_005271639 (OMIM: 607938) PREDICTED: neurotrimin ( 355) 194 42.6 0.0017 XP_005271637 (OMIM: 607938) PREDICTED: neurotrimin ( 367) 194 42.7 0.0018 XP_016873344 (OMIM: 607938) PREDICTED: neurotrimin ( 373) 194 42.7 0.0018 XP_016873341 (OMIM: 607938) PREDICTED: neurotrimin ( 385) 194 42.7 0.0019 NP_001137531 (OMIM: 607938) neurotrimin isoform 4 ( 316) 191 42.1 0.0022 XP_016873353 (OMIM: 607938) PREDICTED: neurotrimin ( 325) 191 42.1 0.0022 XP_011541163 (OMIM: 607938) PREDICTED: neurotrimin ( 326) 191 42.1 0.0023 XP_016873350 (OMIM: 607938) PREDICTED: neurotrimin ( 335) 191 42.1 0.0023 XP_016873351 (OMIM: 607938) PREDICTED: neurotrimin ( 335) 191 42.1 0.0023 NP_057606 (OMIM: 607938) neurotrimin isoform 1 pre ( 344) 191 42.2 0.0024 XP_006718918 (OMIM: 607938) PREDICTED: neurotrimin ( 346) 191 42.2 0.0024 XP_016873347 (OMIM: 607938) PREDICTED: neurotrimin ( 346) 191 42.2 0.0024 XP_016873348 (OMIM: 607938) PREDICTED: neurotrimin ( 346) 191 42.2 0.0024 NP_001137530 (OMIM: 607938) neurotrimin isoform 3 ( 355) 191 42.2 0.0024 XP_016873345 (OMIM: 607938) PREDICTED: neurotrimin ( 358) 191 42.2 0.0024 XP_016873346 (OMIM: 607938) PREDICTED: neurotrimin ( 358) 191 42.2 0.0024 XP_005271638 (OMIM: 607938) PREDICTED: neurotrimin ( 367) 191 42.2 0.0025 XP_016873343 (OMIM: 607938) PREDICTED: neurotrimin ( 373) 191 42.2 0.0025 XP_016873342 (OMIM: 607938) PREDICTED: neurotrimin ( 376) 191 42.2 0.0025 >>NP_062550 (OMIM: 612597) cytotoxic and regulatory T-ce (393 aa) initn: 2539 init1: 2539 opt: 2539 Z-score: 2206.6 bits: 417.1 E(85289): 3.6e-116 Smith-Waterman score: 2539; 100.0% identity (100.0% similar) in 393 aa overlap (1-393:1-393) 10 20 30 40 50 60 pF1KE2 MWWRVLSLLAWFPLQEASLTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_062 MWWRVLSLLAWFPLQEASLTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NEYPALKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSDSVSTKEVKVIVLATPFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_062 NEYPALKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSDSVSTKEVKVIVLATPFK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 PILEASVIRKQNGEEHVVLMCSTMRSKPPPQITWLLGNSMEVSGGTLHEFETDGKKCNTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_062 PILEASVIRKQNGEEHVVLMCSTMRSKPPPQITWLLGNSMEVSGGTLHEFETDGKKCNTT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 STLIIHTYGKNSTVDCIIRHRGLQGRKLVAPFRFEDLVTDEETASDALERNSLSSQDPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_062 STLIIHTYGKNSTVDCIIRHRGLQGRKLVAPFRFEDLVTDEETASDALERNSLSSQDPQQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 PTSTVSVTEDSSTSEIDKEEKEQTTQDPDLTTEANPQYLGLARKKSGILLLTLVSFLIFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_062 PTSTVSVTEDSSTSEIDKEEKEQTTQDPDLTTEANPQYLGLARKKSGILLLTLVSFLIFI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 LFIIVQLFIMKLRKAHVIWKKENEVSEHTLESYRSRSNNEETSSEEKNGQSSHPMRCMNY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_062 LFIIVQLFIMKLRKAHVIWKKENEVSEHTLESYRSRSNNEETSSEEKNGQSSHPMRCMNY 310 320 330 340 350 360 370 380 390 pF1KE2 ITKLYSEAKTKRKENVQHSKLEEKHIQVPESIV ::::::::::::::::::::::::::::::::: NP_062 ITKLYSEAKTKRKENVQHSKLEEKHIQVPESIV 370 380 390 >>XP_011541202 (OMIM: 612597) PREDICTED: cytotoxic and r (342 aa) initn: 1788 init1: 1788 opt: 1788 Z-score: 1559.4 bits: 297.2 E(85289): 4e-80 Smith-Waterman score: 2107; 87.0% identity (87.0% similar) in 393 aa overlap (1-393:1-342) 10 20 30 40 50 60 pF1KE2 MWWRVLSLLAWFPLQEASLTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MWWRVLSLLAWFPLQEASLTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NEYPALKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSDSVSTKEVKVIVLATPFK ::::: :::: XP_011 NEYPA---------------------------------------------------TPFK 130 140 150 160 170 180 pF1KE2 PILEASVIRKQNGEEHVVLMCSTMRSKPPPQITWLLGNSMEVSGGTLHEFETDGKKCNTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PILEASVIRKQNGEEHVVLMCSTMRSKPPPQITWLLGNSMEVSGGTLHEFETDGKKCNTT 70 80 90 100 110 120 190 200 210 220 230 240 pF1KE2 STLIIHTYGKNSTVDCIIRHRGLQGRKLVAPFRFEDLVTDEETASDALERNSLSSQDPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 STLIIHTYGKNSTVDCIIRHRGLQGRKLVAPFRFEDLVTDEETASDALERNSLSSQDPQQ 130 140 150 160 170 180 250 260 270 280 290 300 pF1KE2 PTSTVSVTEDSSTSEIDKEEKEQTTQDPDLTTEANPQYLGLARKKSGILLLTLVSFLIFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PTSTVSVTEDSSTSEIDKEEKEQTTQDPDLTTEANPQYLGLARKKSGILLLTLVSFLIFI 190 200 210 220 230 240 310 320 330 340 350 360 pF1KE2 LFIIVQLFIMKLRKAHVIWKKENEVSEHTLESYRSRSNNEETSSEEKNGQSSHPMRCMNY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LFIIVQLFIMKLRKAHVIWKKENEVSEHTLESYRSRSNNEETSSEEKNGQSSHPMRCMNY 250 260 270 280 290 300 370 380 390 pF1KE2 ITKLYSEAKTKRKENVQHSKLEEKHIQVPESIV ::::::::::::::::::::::::::::::::: XP_011 ITKLYSEAKTKRKENVQHSKLEEKHIQVPESIV 310 320 330 340 >>NP_001291711 (OMIM: 612597) cytotoxic and regulatory T (194 aa) initn: 1137 init1: 1105 opt: 1114 Z-score: 981.3 bits: 189.4 E(85289): 6.4e-48 Smith-Waterman score: 1114; 96.8% identity (97.3% similar) in 187 aa overlap (208-393:8-194) 180 190 200 210 220 230 pF1KE2 NTTSTLIIHTYGKNSTVDCIIRHRGLQGRKLVAPFRFED-LVTDEETASDALERNSLSSQ .:: : : :::::::::::::::::::: NP_001 MWVKLLSIVAEFCFSPFLVTDEETASDALERNSLSSQ 10 20 30 240 250 260 270 280 290 pF1KE2 DPQQPTSTVSVTEDSSTSEIDKEEKEQTTQDPDLTTEANPQYLGLARKKSGILLLTLVSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DPQQPTSTVSVTEDSSTSEIDKEEKEQTTQDPDLTTEANPQYLGLARKKSGILLLTLVSF 40 50 60 70 80 90 300 310 320 330 340 350 pF1KE2 LIFILFIIVQLFIMKLRKAHVIWKKENEVSEHTLESYRSRSNNEETSSEEKNGQSSHPMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LIFILFIIVQLFIMKLRKAHVIWKKENEVSEHTLESYRSRSNNEETSSEEKNGQSSHPMR 100 110 120 130 140 150 360 370 380 390 pF1KE2 CMNYITKLYSEAKTKRKENVQHSKLEEKHIQVPESIV ::::::::::::::::::::::::::::::::::::: NP_001 CMNYITKLYSEAKTKRKENVQHSKLEEKHIQVPESIV 160 170 180 190 >>XP_016872947 (OMIM: 605686) PREDICTED: cell adhesion m (402 aa) initn: 264 init1: 226 opt: 320 Z-score: 291.5 bits: 62.8 E(85289): 1.7e-09 Smith-Waterman score: 320; 30.1% identity (62.8% similar) in 183 aa overlap (23-205:9-189) 10 20 30 40 50 60 pF1KE2 MWWRVLSLLAWFPLQEASLTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFL :. .:: ::.. :..: .. .: .: :.:. ::.. XP_016 MGDGQNLFTKDVTVIEGEVATISCQVNKSDDSVIQLLNPNRQTIYF 10 20 30 40 70 80 90 100 110 120 pF1KE2 NEYPALKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSDSVSTKEVKVIVLATPFK .. ::.:..:::. :...:.... ::...::: : : :.: . . . . ::. : . XP_016 RDFRPLKDSRFQLLNFSSSELKVSLTNVSISDEGRYFCQLYTDPPQESYTTITVLVPPRN 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE2 PILEASVIRKQNGEEHVVLMCSTMRSKPPPQITWLLGNSMEVSGGTLHEFETDGKKCNTT ... . .::: . . :..: ::: : :. ::. :..: . : .: .. XP_016 LMIDIQKDTAVEGEE-IEVNCTAMASKPATTIRWFKGNT-ELKGKSEVEEWSDMYTVTSQ 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE2 STLIIHTYGKNSTVDCIIRHRGLQGRKLVAPFRFEDLVTDEETASDALERNSLSSQDPQQ : .: . : : ..: .. : XP_016 LMLKVHKEDDGVPVICQVEHPAVTGNLQTQRYLEVQYKPQVHIQMTYPLQGLTREGDALE 170 180 190 200 210 220 >>NP_001091987 (OMIM: 605686) cell adhesion molecule 1 i (414 aa) initn: 264 init1: 226 opt: 320 Z-score: 291.4 bits: 62.8 E(85289): 1.7e-09 Smith-Waterman score: 320; 30.1% identity (62.8% similar) in 183 aa overlap (23-205:49-229) 10 20 30 40 50 pF1KE2 MWWRVLSLLAWFPLQEASLTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLT :. .:: ::.. :..: .. .: .: :. NP_001 AAPPGLRLRLLLLLFSAAALIPTGDGQNLFTKDVTVIEGEVATISCQVNKSDDSVIQLLN 20 30 40 50 60 70 60 70 80 90 100 110 pF1KE2 PSGFTIFLNEYPALKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSDSVSTKEVKV :. ::.. .. ::.:..:::. :...:.... ::...::: : : :.: . . . . NP_001 PNRQTIYFRDFRPLKDSRFQLLNFSSSELKVSLTNVSISDEGRYFCQLYTDPPQESYTTI 80 90 100 110 120 130 120 130 140 150 160 170 pF1KE2 IVLATPFKPILEASVIRKQNGEEHVVLMCSTMRSKPPPQITWLLGNSMEVSGGTLHEFET ::. : . ... . .::: . . :..: ::: : :. ::. :..: . : . NP_001 TVLVPPRNLMIDIQKDTAVEGEE-IEVNCTAMASKPATTIRWFKGNT-ELKGKSEVEEWS 140 150 160 170 180 190 180 190 200 210 220 230 pF1KE2 DGKKCNTTSTLIIHTYGKNSTVDCIIRHRGLQGRKLVAPFRFEDLVTDEETASDALERNS : .. : .: . : : ..: .. : NP_001 DMYTVTSQLMLKVHKEDDGVPVICQVEHPAVTGNLQTQRYLEVQYKPQVHIQMTYPLQGL 200 210 220 230 240 250 240 250 260 270 280 290 pF1KE2 LSSQDPQQPTSTVSVTEDSSTSEIDKEEKEQTTQDPDLTTEANPQYLGLARKKSGILLLT NP_001 TREGDALELTCEAIGKPQPVMVTWVRVDDEMPQHAVLSGPNLFINNLNKTDNGTYRCEAS 260 270 280 290 300 310 >>XP_005271551 (OMIM: 605686) PREDICTED: cell adhesion m (425 aa) initn: 264 init1: 226 opt: 320 Z-score: 291.2 bits: 62.8 E(85289): 1.8e-09 Smith-Waterman score: 320; 30.1% identity (62.8% similar) in 183 aa overlap (23-205:49-229) 10 20 30 40 50 pF1KE2 MWWRVLSLLAWFPLQEASLTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLT :. .:: ::.. :..: .. .: .: :. XP_005 AAPPGLRLRLLLLLFSAAALIPTGDGQNLFTKDVTVIEGEVATISCQVNKSDDSVIQLLN 20 30 40 50 60 70 60 70 80 90 100 110 pF1KE2 PSGFTIFLNEYPALKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSDSVSTKEVKV :. ::.. .. ::.:..:::. :...:.... ::...::: : : :.: . . . . XP_005 PNRQTIYFRDFRPLKDSRFQLLNFSSSELKVSLTNVSISDEGRYFCQLYTDPPQESYTTI 80 90 100 110 120 130 120 130 140 150 160 170 pF1KE2 IVLATPFKPILEASVIRKQNGEEHVVLMCSTMRSKPPPQITWLLGNSMEVSGGTLHEFET ::. : . ... . .::: . . :..: ::: : :. ::. :..: . : . XP_005 TVLVPPRNLMIDIQKDTAVEGEE-IEVNCTAMASKPATTIRWFKGNT-ELKGKSEVEEWS 140 150 160 170 180 190 180 190 200 210 220 230 pF1KE2 DGKKCNTTSTLIIHTYGKNSTVDCIIRHRGLQGRKLVAPFRFEDLVTDEETASDALERNS : .. : .: . : : ..: .. : XP_005 DMYTVTSQLMLKVHKEDDGVPVICQVEHPAVTGNLQTQRYLEVQYKPQVHIQMTYPLQGL 200 210 220 230 240 250 240 250 260 270 280 290 pF1KE2 LSSQDPQQPTSTVSVTEDSSTSEIDKEEKEQTTQDPDLTTEANPQYLGLARKKSGILLLT XP_005 TREGDALELTCEAIGKPQPVMVTWVRVDDEMPQHAVLSGPNLFINNLNKTDNGTYRCEAS 260 270 280 290 300 310 >>NP_055148 (OMIM: 605686) cell adhesion molecule 1 isof (442 aa) initn: 264 init1: 226 opt: 320 Z-score: 290.9 bits: 62.8 E(85289): 1.8e-09 Smith-Waterman score: 320; 30.1% identity (62.8% similar) in 183 aa overlap (23-205:49-229) 10 20 30 40 50 pF1KE2 MWWRVLSLLAWFPLQEASLTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLT :. .:: ::.. :..: .. .: .: :. NP_055 AAPPGLRLRLLLLLFSAAALIPTGDGQNLFTKDVTVIEGEVATISCQVNKSDDSVIQLLN 20 30 40 50 60 70 60 70 80 90 100 110 pF1KE2 PSGFTIFLNEYPALKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSDSVSTKEVKV :. ::.. .. ::.:..:::. :...:.... ::...::: : : :.: . . . . NP_055 PNRQTIYFRDFRPLKDSRFQLLNFSSSELKVSLTNVSISDEGRYFCQLYTDPPQESYTTI 80 90 100 110 120 130 120 130 140 150 160 170 pF1KE2 IVLATPFKPILEASVIRKQNGEEHVVLMCSTMRSKPPPQITWLLGNSMEVSGGTLHEFET ::. : . ... . .::: . . :..: ::: : :. ::. :..: . : . NP_055 TVLVPPRNLMIDIQKDTAVEGEE-IEVNCTAMASKPATTIRWFKGNT-ELKGKSEVEEWS 140 150 160 170 180 190 180 190 200 210 220 230 pF1KE2 DGKKCNTTSTLIIHTYGKNSTVDCIIRHRGLQGRKLVAPFRFEDLVTDEETASDALERNS : .. : .: . : : ..: .. : NP_055 DMYTVTSQLMLKVHKEDDGVPVICQVEHPAVTGNLQTQRYLEVQYKPQVHIQMTYPLQGL 200 210 220 230 240 250 240 250 260 270 280 290 pF1KE2 LSSQDPQQPTSTVSVTEDSSTSEIDKEEKEQTTQDPDLTTEANPQYLGLARKKSGILLLT NP_055 TREGDALELTCEAIGKPQPVMVTWVRVDDEMPQHAVLSGPNLFINNLNKTDNGTYRCEAS 260 270 280 290 300 310 >>NP_001287974 (OMIM: 605686) cell adhesion molecule 1 i (443 aa) initn: 264 init1: 226 opt: 320 Z-score: 290.9 bits: 62.8 E(85289): 1.8e-09 Smith-Waterman score: 320; 30.1% identity (62.8% similar) in 183 aa overlap (23-205:49-229) 10 20 30 40 50 pF1KE2 MWWRVLSLLAWFPLQEASLTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLT :. .:: ::.. :..: .. .: .: :. NP_001 AAPPGLRLRLLLLLFSAAALIPTGDGQNLFTKDVTVIEGEVATISCQVNKSDDSVIQLLN 20 30 40 50 60 70 60 70 80 90 100 110 pF1KE2 PSGFTIFLNEYPALKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSDSVSTKEVKV :. ::.. .. ::.:..:::. :...:.... ::...::: : : :.: . . . . NP_001 PNRQTIYFRDFRPLKDSRFQLLNFSSSELKVSLTNVSISDEGRYFCQLYTDPPQESYTTI 80 90 100 110 120 130 120 130 140 150 160 170 pF1KE2 IVLATPFKPILEASVIRKQNGEEHVVLMCSTMRSKPPPQITWLLGNSMEVSGGTLHEFET ::. : . ... . .::: . . :..: ::: : :. ::. :..: . : . NP_001 TVLVPPRNLMIDIQKDTAVEGEE-IEVNCTAMASKPATTIRWFKGNT-ELKGKSEVEEWS 140 150 160 170 180 190 180 190 200 210 220 230 pF1KE2 DGKKCNTTSTLIIHTYGKNSTVDCIIRHRGLQGRKLVAPFRFEDLVTDEETASDALERNS : .. : .: . : : ..: .. : NP_001 DMYTVTSQLMLKVHKEDDGVPVICQVEHPAVTGNLQTQRYLEVQYKPQVHIQMTYPLQGL 200 210 220 230 240 250 240 250 260 270 280 290 pF1KE2 LSSQDPQQPTSTVSVTEDSSTSEIDKEEKEQTTQDPDLTTEANPQYLGLARKKSGILLLT NP_001 TREGDALELTCEAIGKPQPVMVTWVRVDDEMPQHAVLSGPNLFINNLNKTDNGTYRCEAS 260 270 280 290 300 310 >>NP_001287973 (OMIM: 605686) cell adhesion molecule 1 i (453 aa) initn: 264 init1: 226 opt: 320 Z-score: 290.8 bits: 62.8 E(85289): 1.9e-09 Smith-Waterman score: 320; 30.1% identity (62.8% similar) in 183 aa overlap (23-205:49-229) 10 20 30 40 50 pF1KE2 MWWRVLSLLAWFPLQEASLTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLT :. .:: ::.. :..: .. .: .: :. NP_001 AAPPGLRLRLLLLLFSAAALIPTGDGQNLFTKDVTVIEGEVATISCQVNKSDDSVIQLLN 20 30 40 50 60 70 60 70 80 90 100 110 pF1KE2 PSGFTIFLNEYPALKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSDSVSTKEVKV :. ::.. .. ::.:..:::. :...:.... ::...::: : : :.: . . . . NP_001 PNRQTIYFRDFRPLKDSRFQLLNFSSSELKVSLTNVSISDEGRYFCQLYTDPPQESYTTI 80 90 100 110 120 130 120 130 140 150 160 170 pF1KE2 IVLATPFKPILEASVIRKQNGEEHVVLMCSTMRSKPPPQITWLLGNSMEVSGGTLHEFET ::. : . ... . .::: . . :..: ::: : :. ::. :..: . : . NP_001 TVLVPPRNLMIDIQKDTAVEGEE-IEVNCTAMASKPATTIRWFKGNT-ELKGKSEVEEWS 140 150 160 170 180 190 180 190 200 210 220 230 pF1KE2 DGKKCNTTSTLIIHTYGKNSTVDCIIRHRGLQGRKLVAPFRFEDLVTDEETASDALERNS : .. : .: . : : ..: .. : NP_001 DMYTVTSQLMLKVHKEDDGVPVICQVEHPAVTGNLQTQRYLEVQYKPQVHIQMTYPLQGL 200 210 220 230 240 250 240 250 260 270 280 290 pF1KE2 LSSQDPQQPTSTVSVTEDSSTSEIDKEEKEQTTQDPDLTTEANPQYLGLARKKSGILLLT NP_001 TREGDALELTCEAIGKPQPVMVTWVRVDDEMPQHAVLSGPNLFINNLNKTDNGTYRCEAS 260 270 280 290 300 310 >>NP_001120645 (OMIM: 609743) cell adhesion molecule 3 i (398 aa) initn: 276 init1: 237 opt: 319 Z-score: 290.7 bits: 62.6 E(85289): 1.9e-09 Smith-Waterman score: 319; 31.8% identity (64.6% similar) in 198 aa overlap (27-219:39-232) 10 20 30 40 50 pF1KE2 MWWRVLSLLAWFPLQEASLTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGF :: : :..::: .. ...::::: .:. NP_001 LLLLLLFACCWAPGGANLSQDDSQPWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQ 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE2 TIFLNEYPALKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSDSVSTKEVKVIVLA :....: ::.... ::. . ..:::.. ::.: ::: : : .. : : . : ::. NP_001 TLYFGEKRALRDNRIQLVTSTPHELSISISNVALADEGEYTCSIFTMPVRTAKSLVTVLG 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE2 TPFKPILEA--SVIRKQNGEEHVVLMCSTMRSKPPPQITWLLGNSMEVSG-GTLHEFETD : :::. . : .:.. . ..: :.. ::: ..:: :.. :. : : . . . NP_001 IPQKPIITGYKSSLREK---DTATLNCQSSGSKPAARLTWRKGDQ-ELHGEPTRIQEDPN 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE2 GKKCNTTSTLIIHTYGKN--STVDCIIRHRGLQGRKLVAPFRFEDLVTDEETASDALERN :: ...:.. ... .. ... : . :..:.: . :.: : : NP_001 GKTFTVSSSVTFQVTREDDGASIVCSVNHESLKGADRSTSQRIEVLYTPTAMIRPDPPHP 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE2 SLSSQDPQQPTSTVSVTEDSSTSEIDKEEKEQTTQDPDLTTEANPQYLGLARKKSGILLL NP_001 REGQKLLLHCEGRGNPVPQQYLWEKEGSVPPLKMTQESALIFPFLNKSDSGTYGCTATSN 250 260 270 280 290 300 393 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 09:17:36 2016 done: Sun Nov 6 09:17:37 2016 Total Scan time: 9.220 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]