FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6512, 163 aa 1>>>pF1KE6512 163 - 163 aa - 163 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1102+/-0.000748; mu= 13.7206+/- 0.045 mean_var=65.0824+/-12.867, 0's: 0 Z-trim(108.7): 8 B-trim: 5 in 1/51 Lambda= 0.158980 statistics sampled from 10405 (10409) to 10405 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.713), E-opt: 0.2 (0.32), width: 16 Scan time: 1.480 The best scores are: opt bits E(32554) CCDS53682.1 OMP gene_id:4975|Hs108|chr11 ( 163) 1083 256.5 5.5e-69 >>CCDS53682.1 OMP gene_id:4975|Hs108|chr11 (163 aa) initn: 1083 init1: 1083 opt: 1083 Z-score: 1352.1 bits: 256.5 E(32554): 5.5e-69 Smith-Waterman score: 1083; 100.0% identity (100.0% similar) in 163 aa overlap (1-163:1-163) 10 20 30 40 50 60 pF1KE6 MAEDRPQQPQLDMPLVLDQGLTRQMRLRVESLKQRGEKRQDGEKLLQPAESVYRLNFTQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 MAEDRPQQPQLDMPLVLDQGLTRQMRLRVESLKQRGEKRQDGEKLLQPAESVYRLNFTQQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 QRLQFERWNVVLDKPGKVTITGTSQNWTPDLTNLMTRQLLDPTAIFWRKEDSDAIDWNEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 QRLQFERWNVVLDKPGKVTITGTSQNWTPDLTNLMTRQLLDPTAIFWRKEDSDAIDWNEA 70 80 90 100 110 120 130 140 150 160 pF1KE6 DALEFGERLSDLAKIRKVMYFLVTFGEGVEPANLKASVVFNQL ::::::::::::::::::::::::::::::::::::::::::: CCDS53 DALEFGERLSDLAKIRKVMYFLVTFGEGVEPANLKASVVFNQL 130 140 150 160 163 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 13:58:46 2016 done: Tue Nov 8 13:58:46 2016 Total Scan time: 1.480 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]