Result of FASTA (omim) for
pFN21AE5312
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5312, 291 aa
1>>>pF1KE5312 291 - 291 aa - 291 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0781+/-0.000304; mu= 15.1878+/- 0.019
mean_var=142.7162+/-29.955, 0's: 0 Z-trim(120.9): 80 B-trim: 1992 in 1/56
Lambda= 0.107359
statistics sampled from 36598 (36709) to 36598 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.766), E-opt: 0.2 (0.43), width: 16
Scan time: 6.420
The best scores are: opt bits E(85289)
XP_016868552 (OMIM: 614648) PREDICTED: RNA-binding ( 291) 1904 305.6 7.2e-83
NP_001093862 (OMIM: 614648) RNA-binding Raly-like ( 291) 1904 305.6 7.2e-83
XP_016868550 (OMIM: 614648) PREDICTED: RNA-binding ( 291) 1904 305.6 7.2e-83
NP_001093863 (OMIM: 614648) RNA-binding Raly-like ( 291) 1904 305.6 7.2e-83
XP_016868548 (OMIM: 614648) PREDICTED: RNA-binding ( 291) 1904 305.6 7.2e-83
XP_016868554 (OMIM: 614648) PREDICTED: RNA-binding ( 291) 1904 305.6 7.2e-83
XP_016868553 (OMIM: 614648) PREDICTED: RNA-binding ( 291) 1904 305.6 7.2e-83
NP_776247 (OMIM: 614648) RNA-binding Raly-like pro ( 291) 1904 305.6 7.2e-83
XP_016868551 (OMIM: 614648) PREDICTED: RNA-binding ( 291) 1904 305.6 7.2e-83
XP_016868549 (OMIM: 614648) PREDICTED: RNA-binding ( 291) 1904 305.6 7.2e-83
NP_001093861 (OMIM: 614648) RNA-binding Raly-like ( 304) 1904 305.7 7.4e-83
XP_016868563 (OMIM: 614648) PREDICTED: RNA-binding ( 238) 1494 242.0 8.2e-64
XP_016868561 (OMIM: 614648) PREDICTED: RNA-binding ( 251) 1494 242.1 8.5e-64
XP_016868566 (OMIM: 614648) PREDICTED: RNA-binding ( 235) 1490 241.4 1.3e-63
XP_016868567 (OMIM: 614648) PREDICTED: RNA-binding ( 235) 1490 241.4 1.3e-63
XP_016868568 (OMIM: 614648) PREDICTED: RNA-binding ( 235) 1490 241.4 1.3e-63
XP_016868565 (OMIM: 614648) PREDICTED: RNA-binding ( 235) 1490 241.4 1.3e-63
XP_016868562 (OMIM: 614648) PREDICTED: RNA-binding ( 248) 1490 241.4 1.3e-63
XP_016868572 (OMIM: 614648) PREDICTED: RNA-binding ( 211) 1357 220.7 1.9e-57
NP_001274173 (OMIM: 614648) RNA-binding Raly-like ( 218) 1355 220.5 2.3e-57
XP_016868574 (OMIM: 614648) PREDICTED: RNA-binding ( 203) 1343 218.6 8.1e-57
XP_016868560 (OMIM: 614648) PREDICTED: RNA-binding ( 280) 1130 185.7 8.6e-47
XP_016868555 (OMIM: 614648) PREDICTED: RNA-binding ( 280) 1130 185.7 8.6e-47
NP_001274172 (OMIM: 614648) RNA-binding Raly-like ( 280) 1130 185.7 8.6e-47
XP_016868557 (OMIM: 614648) PREDICTED: RNA-binding ( 280) 1130 185.7 8.6e-47
XP_016868558 (OMIM: 614648) PREDICTED: RNA-binding ( 280) 1130 185.7 8.6e-47
XP_016868559 (OMIM: 614648) PREDICTED: RNA-binding ( 280) 1130 185.7 8.6e-47
XP_016868556 (OMIM: 614648) PREDICTED: RNA-binding ( 280) 1130 185.7 8.6e-47
XP_016868547 (OMIM: 614648) PREDICTED: RNA-binding ( 293) 1130 185.8 8.8e-47
XP_016868573 (OMIM: 614648) PREDICTED: RNA-binding ( 207) 1120 184.0 2.1e-46
XP_016868575 (OMIM: 614648) PREDICTED: RNA-binding ( 165) 945 156.8 2.6e-38
XP_016868576 (OMIM: 614648) PREDICTED: RNA-binding ( 162) 941 156.2 3.9e-38
NP_001070910 (OMIM: 164020) heterogeneous nuclear ( 306) 907 151.2 2.3e-36
NP_112604 (OMIM: 164020) heterogeneous nuclear rib ( 306) 907 151.2 2.3e-36
XP_011535013 (OMIM: 164020) PREDICTED: heterogeneo ( 306) 907 151.2 2.3e-36
XP_011535010 (OMIM: 164020) PREDICTED: heterogeneo ( 306) 907 151.2 2.3e-36
XP_011535011 (OMIM: 164020) PREDICTED: heterogeneo ( 306) 907 151.2 2.3e-36
XP_011535012 (OMIM: 164020) PREDICTED: heterogeneo ( 306) 907 151.2 2.3e-36
XP_016868570 (OMIM: 614648) PREDICTED: RNA-binding ( 224) 743 125.7 8.2e-29
XP_016868571 (OMIM: 614648) PREDICTED: RNA-binding ( 224) 743 125.7 8.2e-29
XP_011515764 (OMIM: 614648) PREDICTED: RNA-binding ( 227) 743 125.7 8.3e-29
XP_016868569 (OMIM: 614648) PREDICTED: RNA-binding ( 227) 743 125.7 8.3e-29
XP_016868564 (OMIM: 614648) PREDICTED: RNA-binding ( 237) 743 125.7 8.5e-29
NP_004491 (OMIM: 164020) heterogeneous nuclear rib ( 293) 664 113.6 4.7e-25
XP_006720188 (OMIM: 164020) PREDICTED: heterogeneo ( 293) 664 113.6 4.7e-25
NP_001070911 (OMIM: 164020) heterogeneous nuclear ( 293) 664 113.6 4.7e-25
XP_016876741 (OMIM: 164020) PREDICTED: heterogeneo ( 293) 664 113.6 4.7e-25
XP_011535014 (OMIM: 164020) PREDICTED: heterogeneo ( 293) 664 113.6 4.7e-25
XP_016876742 (OMIM: 164020) PREDICTED: heterogeneo ( 293) 664 113.6 4.7e-25
NP_057951 (OMIM: 614663) RNA-binding protein Raly ( 306) 590 102.1 1.4e-21
>>XP_016868552 (OMIM: 614648) PREDICTED: RNA-binding Ral (291 aa)
initn: 1904 init1: 1904 opt: 1904 Z-score: 1608.8 bits: 305.6 E(85289): 7.2e-83
Smith-Waterman score: 1904; 100.0% identity (100.0% similar) in 291 aa overlap (1-291:1-291)
10 20 30 40 50 60
pF1KE5 MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 QYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 VGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 STASGSTGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STASGSTGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESLV
190 200 210 220 230 240
250 260 270 280 290
pF1KE5 LIQEECVSEIADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELFLQIK
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LIQEECVSEIADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELFLQIK
250 260 270 280 290
>>NP_001093862 (OMIM: 614648) RNA-binding Raly-like prot (291 aa)
initn: 1904 init1: 1904 opt: 1904 Z-score: 1608.8 bits: 305.6 E(85289): 7.2e-83
Smith-Waterman score: 1904; 100.0% identity (100.0% similar) in 291 aa overlap (1-291:1-291)
10 20 30 40 50 60
pF1KE5 MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 QYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 VGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 STASGSTGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 STASGSTGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESLV
190 200 210 220 230 240
250 260 270 280 290
pF1KE5 LIQEECVSEIADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELFLQIK
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LIQEECVSEIADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELFLQIK
250 260 270 280 290
>>XP_016868550 (OMIM: 614648) PREDICTED: RNA-binding Ral (291 aa)
initn: 1904 init1: 1904 opt: 1904 Z-score: 1608.8 bits: 305.6 E(85289): 7.2e-83
Smith-Waterman score: 1904; 100.0% identity (100.0% similar) in 291 aa overlap (1-291:1-291)
10 20 30 40 50 60
pF1KE5 MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 QYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 VGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 STASGSTGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STASGSTGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESLV
190 200 210 220 230 240
250 260 270 280 290
pF1KE5 LIQEECVSEIADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELFLQIK
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LIQEECVSEIADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELFLQIK
250 260 270 280 290
>>NP_001093863 (OMIM: 614648) RNA-binding Raly-like prot (291 aa)
initn: 1904 init1: 1904 opt: 1904 Z-score: 1608.8 bits: 305.6 E(85289): 7.2e-83
Smith-Waterman score: 1904; 100.0% identity (100.0% similar) in 291 aa overlap (1-291:1-291)
10 20 30 40 50 60
pF1KE5 MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 QYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 VGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 STASGSTGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 STASGSTGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESLV
190 200 210 220 230 240
250 260 270 280 290
pF1KE5 LIQEECVSEIADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELFLQIK
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LIQEECVSEIADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELFLQIK
250 260 270 280 290
>>XP_016868548 (OMIM: 614648) PREDICTED: RNA-binding Ral (291 aa)
initn: 1904 init1: 1904 opt: 1904 Z-score: 1608.8 bits: 305.6 E(85289): 7.2e-83
Smith-Waterman score: 1904; 100.0% identity (100.0% similar) in 291 aa overlap (1-291:1-291)
10 20 30 40 50 60
pF1KE5 MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 QYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 VGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 STASGSTGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STASGSTGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESLV
190 200 210 220 230 240
250 260 270 280 290
pF1KE5 LIQEECVSEIADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELFLQIK
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LIQEECVSEIADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELFLQIK
250 260 270 280 290
>>XP_016868554 (OMIM: 614648) PREDICTED: RNA-binding Ral (291 aa)
initn: 1904 init1: 1904 opt: 1904 Z-score: 1608.8 bits: 305.6 E(85289): 7.2e-83
Smith-Waterman score: 1904; 100.0% identity (100.0% similar) in 291 aa overlap (1-291:1-291)
10 20 30 40 50 60
pF1KE5 MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 QYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 VGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 STASGSTGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STASGSTGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESLV
190 200 210 220 230 240
250 260 270 280 290
pF1KE5 LIQEECVSEIADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELFLQIK
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LIQEECVSEIADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELFLQIK
250 260 270 280 290
>>XP_016868553 (OMIM: 614648) PREDICTED: RNA-binding Ral (291 aa)
initn: 1904 init1: 1904 opt: 1904 Z-score: 1608.8 bits: 305.6 E(85289): 7.2e-83
Smith-Waterman score: 1904; 100.0% identity (100.0% similar) in 291 aa overlap (1-291:1-291)
10 20 30 40 50 60
pF1KE5 MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 QYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 VGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 STASGSTGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STASGSTGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESLV
190 200 210 220 230 240
250 260 270 280 290
pF1KE5 LIQEECVSEIADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELFLQIK
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LIQEECVSEIADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELFLQIK
250 260 270 280 290
>>NP_776247 (OMIM: 614648) RNA-binding Raly-like protein (291 aa)
initn: 1904 init1: 1904 opt: 1904 Z-score: 1608.8 bits: 305.6 E(85289): 7.2e-83
Smith-Waterman score: 1904; 100.0% identity (100.0% similar) in 291 aa overlap (1-291:1-291)
10 20 30 40 50 60
pF1KE5 MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_776 MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 QYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_776 QYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 VGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_776 VGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 STASGSTGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_776 STASGSTGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESLV
190 200 210 220 230 240
250 260 270 280 290
pF1KE5 LIQEECVSEIADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELFLQIK
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_776 LIQEECVSEIADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELFLQIK
250 260 270 280 290
>>XP_016868551 (OMIM: 614648) PREDICTED: RNA-binding Ral (291 aa)
initn: 1904 init1: 1904 opt: 1904 Z-score: 1608.8 bits: 305.6 E(85289): 7.2e-83
Smith-Waterman score: 1904; 100.0% identity (100.0% similar) in 291 aa overlap (1-291:1-291)
10 20 30 40 50 60
pF1KE5 MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 QYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 VGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 STASGSTGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STASGSTGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESLV
190 200 210 220 230 240
250 260 270 280 290
pF1KE5 LIQEECVSEIADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELFLQIK
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LIQEECVSEIADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELFLQIK
250 260 270 280 290
>>XP_016868549 (OMIM: 614648) PREDICTED: RNA-binding Ral (291 aa)
initn: 1904 init1: 1904 opt: 1904 Z-score: 1608.8 bits: 305.6 E(85289): 7.2e-83
Smith-Waterman score: 1904; 100.0% identity (100.0% similar) in 291 aa overlap (1-291:1-291)
10 20 30 40 50 60
pF1KE5 MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 QYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 VGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 STASGSTGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STASGSTGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESLV
190 200 210 220 230 240
250 260 270 280 290
pF1KE5 LIQEECVSEIADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELFLQIK
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LIQEECVSEIADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELFLQIK
250 260 270 280 290
291 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 07:30:12 2016 done: Tue Nov 8 07:30:13 2016
Total Scan time: 6.420 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]