FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3984, 204 aa 1>>>pF1KE3984 204 - 204 aa - 204 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.7325+/-0.000308; mu= 17.2554+/- 0.019 mean_var=72.2150+/-14.542, 0's: 0 Z-trim(118.9): 173 B-trim: 807 in 1/51 Lambda= 0.150925 statistics sampled from 32126 (32347) to 32126 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.765), E-opt: 0.2 (0.379), width: 16 Scan time: 5.880 The best scores are: opt bits E(85289) NP_001654 (OMIM: 600464) ADP-ribosylation factor 6 ( 175) 337 81.7 8e-16 NP_001658 (OMIM: 601175) ADP-ribosylation factor-l ( 184) 323 78.6 6.9e-15 NP_001650 (OMIM: 103190) ADP-ribosylation factor 3 ( 181) 322 78.4 7.9e-15 XP_005268913 (OMIM: 103190) PREDICTED: ADP-ribosyl ( 181) 322 78.4 7.9e-15 NP_001019399 (OMIM: 103180) ADP-ribosylation facto ( 181) 315 76.9 2.3e-14 NP_001019398 (OMIM: 103180) ADP-ribosylation facto ( 181) 315 76.9 2.3e-14 NP_001019397 (OMIM: 103180) ADP-ribosylation facto ( 181) 315 76.9 2.3e-14 NP_001649 (OMIM: 103180) ADP-ribosylation factor 1 ( 181) 315 76.9 2.3e-14 NP_001653 (OMIM: 103188) ADP-ribosylation factor 5 ( 180) 314 76.7 2.6e-14 NP_004302 (OMIM: 604695) ADP-ribosylation factor-l ( 182) 314 76.7 2.6e-14 XP_016871749 (OMIM: 604695) PREDICTED: ADP-ribosyl ( 182) 314 76.7 2.6e-14 XP_005248554 (OMIM: 601747) PREDICTED: E3 ubiquiti ( 398) 314 77.0 4.6e-14 NP_079323 (OMIM: 614439) ADP-ribosylation factor-l ( 192) 310 75.8 5e-14 XP_016864933 (OMIM: 601747) PREDICTED: E3 ubiquiti ( 569) 314 77.1 6e-14 NP_150230 (OMIM: 601747) E3 ubiquitin-protein liga ( 569) 314 77.1 6e-14 NP_001647 (OMIM: 601747) E3 ubiquitin-protein liga ( 574) 314 77.1 6e-14 NP_001651 (OMIM: 601177) ADP-ribosylation factor 4 ( 180) 299 73.4 2.5e-13 NP_878899 (OMIM: 608922,612291) ADP-ribosylation f ( 428) 292 72.2 1.3e-12 NP_001167621 (OMIM: 608922,612291) ADP-ribosylatio ( 428) 292 72.2 1.3e-12 NP_060654 (OMIM: 616596) ADP-ribosylation factor-l ( 186) 286 70.6 1.8e-12 NP_620150 (OMIM: 616597) ADP-ribosylation factor-l ( 186) 282 69.7 3.4e-12 XP_011523084 (OMIM: 600732) PREDICTED: ADP-ribosyl ( 201) 281 69.5 4.1e-12 NP_001652 (OMIM: 600732) ADP-ribosylation factor-l ( 201) 281 69.5 4.1e-12 NP_150231 (OMIM: 601747) E3 ubiquitin-protein liga ( 546) 284 70.6 5.4e-12 NP_612459 (OMIM: 609351) ADP-ribosylation factor-l ( 196) 275 68.2 1e-11 XP_005266310 (OMIM: 609351) PREDICTED: ADP-ribosyl ( 196) 275 68.2 1e-11 XP_011510837 (OMIM: 608922,612291) PREDICTED: ADP- ( 403) 278 69.2 1.1e-11 NP_005729 (OMIM: 604786) ADP-ribosylation factor-l ( 200) 273 67.8 1.4e-11 NP_001032241 (OMIM: 604786) ADP-ribosylation facto ( 200) 273 67.8 1.4e-11 NP_001182325 (OMIM: 604786) ADP-ribosylation facto ( 200) 273 67.8 1.4e-11 NP_997625 (OMIM: 604786) ADP-ribosylation factor-l ( 200) 273 67.8 1.4e-11 NP_001168 (OMIM: 603425) ADP-ribosylation factor-l ( 181) 267 66.4 3.2e-11 NP_001310442 (OMIM: 209900,268000,600151,608845,61 ( 193) 264 65.8 5.2e-11 NP_005728 (OMIM: 604787) ADP-ribosylation factor-l ( 192) 262 65.4 7e-11 NP_001269360 (OMIM: 604787) ADP-ribosylation facto ( 201) 262 65.4 7.3e-11 XP_016862800 (OMIM: 209900,268000,600151,608845,61 ( 186) 256 64.0 1.7e-10 NP_115522 (OMIM: 209900,268000,600151,608845,61357 ( 186) 256 64.0 1.7e-10 NP_001265222 (OMIM: 209900,268000,600151,608845,61 ( 186) 256 64.0 1.7e-10 NP_816931 (OMIM: 209900,268000,600151,608845,61357 ( 186) 256 64.0 1.7e-10 XP_016856722 (OMIM: 103180) PREDICTED: ADP-ribosyl ( 212) 253 63.4 2.9e-10 XP_016862801 (OMIM: 209900,268000,600151,608845,61 ( 159) 251 62.9 3.2e-10 NP_001310443 (OMIM: 209900,268000,600151,608845,61 ( 159) 251 62.9 3.2e-10 XP_011526784 (OMIM: 604699) PREDICTED: ADP-ribosyl ( 201) 251 63.0 3.8e-10 NP_001254476 (OMIM: 604699) ADP-ribosylation facto ( 201) 251 63.0 3.8e-10 XP_016883065 (OMIM: 604699) PREDICTED: ADP-ribosyl ( 201) 251 63.0 3.8e-10 NP_001254477 (OMIM: 604699) ADP-ribosylation facto ( 201) 251 63.0 3.8e-10 NP_003215 (OMIM: 604699) ADP-ribosylation factor-r ( 201) 251 63.0 3.8e-10 XP_011526785 (OMIM: 604699) PREDICTED: ADP-ribosyl ( 201) 251 63.0 3.8e-10 XP_006719454 (OMIM: 103190) PREDICTED: ADP-ribosyl ( 137) 248 62.2 4.6e-10 NP_036229 (OMIM: 608960) ADP-ribosylation factor-l ( 179) 248 62.3 5.5e-10 >>NP_001654 (OMIM: 600464) ADP-ribosylation factor 6 [Ho (175 aa) initn: 290 init1: 221 opt: 337 Z-score: 405.1 bits: 81.7 E(85289): 8e-16 Smith-Waterman score: 337; 35.2% identity (69.2% similar) in 159 aa overlap (32-190:13-169) 10 20 30 40 50 60 pF1KE3 SDLRITEAFLYMDYLCFRALCCKGPPPARPEYDLVCIGLTGSGKTSLLSKLCSESPDNVV :. .. .:: ..:::..: :: . ... NP_001 MGKVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTI 10 20 30 40 70 80 90 100 110 120 pF1KE3 STTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLEAARN :.::....: ..:. .:: ..:: :.:: : .:: :.::.:::.: :. .: .. ::. NP_001 PTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCAD-RDRIDEARQ 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 ELHSALQHPQLCTLPFLILANHQDKPAARSVQEIKKYFELEPLARGKRWILQPCSLDDMD ::: .. .. .::.::.:: : : . .::.. . : . : . : .:: . : NP_001 ELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRI-RDRNWYVQPSCATSGD 110 120 130 140 150 160 190 200 pF1KE3 ALKDSFSQLINLLEEKDHEAVRM .: .... : NP_001 GLYEGLTWLTSNYKS 170 >>NP_001658 (OMIM: 601175) ADP-ribosylation factor-like (184 aa) initn: 307 init1: 201 opt: 323 Z-score: 388.3 bits: 78.6 E(85289): 6.9e-15 Smith-Waterman score: 323; 34.7% identity (68.9% similar) in 167 aa overlap (32-191:16-180) 10 20 30 40 50 60 pF1KE3 SDLRITEAFLYMDYLCFRALCCKGPPPARPEYDLVCIGLTGSGKTSLLSKLCSESPDNVV : :. .:: ..:::..:.:. .:. :.. NP_001 MGLLTILKKMKQKERELRLLMLGLDNAGKTTILKKFNGEDIDTIS 10 20 30 40 70 80 90 100 110 120 pF1KE3 STTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLEAARN : ::.::.. .. ::. ..:: ..:.:: :.....:.:.:.:::. . .. . NP_001 PTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQR-MQDCQR 50 60 70 80 90 100 130 140 150 160 170 pF1KE3 ELHSALQHPQLCTLPFLILANHQDKPAARSVQEIKKYFELEPLARGKRWILQPCS----- ::.: : . .: .::.::.:: :.: : . :.. .::. . :...: .: :: NP_001 ELQSLLVEERLAGATLLIFANKQDLPGALSSNAIREVLELDSI-RSHHWCIQGCSAVTGE 110 120 130 140 150 160 180 190 200 pF1KE3 --LDDMDALKDSFSQLINLLEEKDHEAVRM : .: : :..:. : NP_001 NLLPGIDWLLDDISSRIFTAD 170 180 >>NP_001650 (OMIM: 103190) ADP-ribosylation factor 3 [Ho (181 aa) initn: 213 init1: 213 opt: 322 Z-score: 387.2 bits: 78.4 E(85289): 7.9e-15 Smith-Waterman score: 322; 33.9% identity (65.5% similar) in 168 aa overlap (30-197:15-180) 10 20 30 40 50 60 pF1KE3 MSDLRITEAFLYMDYLCFRALCCKGPPPARPEYDLVCIGLTGSGKTSLLSKLCSESPDNV . :. .. .:: ..:::..: :: .. NP_001 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT 10 20 30 40 70 80 90 100 110 120 pF1KE3 VSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLEAAR . : ::....: ..: ..: ..:: :.:: : .:.:..::.:::.:: . : .. :: NP_001 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER-VNEAR 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 NELHSALQHPQLCTLPFLILANHQDKPAARSVQEIKKYFELEPLARGKRWILQPCSLDDM .:: : . .: .:..::.:: : : .. :: . :. : : . : .: . NP_001 EELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHRNWYIQATCATSG 110 120 130 140 150 160 190 200 pF1KE3 DALKDSFSQLINLLEEKDHEAVRM :.: .... : : :..: NP_001 DGLYEGLDWLANQLKNKK 170 180 >>XP_005268913 (OMIM: 103190) PREDICTED: ADP-ribosylatio (181 aa) initn: 213 init1: 213 opt: 322 Z-score: 387.2 bits: 78.4 E(85289): 7.9e-15 Smith-Waterman score: 322; 33.9% identity (65.5% similar) in 168 aa overlap (30-197:15-180) 10 20 30 40 50 60 pF1KE3 MSDLRITEAFLYMDYLCFRALCCKGPPPARPEYDLVCIGLTGSGKTSLLSKLCSESPDNV . :. .. .:: ..:::..: :: .. XP_005 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT 10 20 30 40 70 80 90 100 110 120 pF1KE3 VSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLEAAR . : ::....: ..: ..: ..:: :.:: : .:.:..::.:::.:: . : .. :: XP_005 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER-VNEAR 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 NELHSALQHPQLCTLPFLILANHQDKPAARSVQEIKKYFELEPLARGKRWILQPCSLDDM .:: : . .: .:..::.:: : : .. :: . :. : : . : .: . XP_005 EELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHRNWYIQATCATSG 110 120 130 140 150 160 190 200 pF1KE3 DALKDSFSQLINLLEEKDHEAVRM :.: .... : : :..: XP_005 DGLYEGLDWLANQLKNKK 170 180 >>NP_001019399 (OMIM: 103180) ADP-ribosylation factor 1 (181 aa) initn: 213 init1: 213 opt: 315 Z-score: 379.0 bits: 76.9 E(85289): 2.3e-14 Smith-Waterman score: 315; 33.3% identity (65.5% similar) in 168 aa overlap (30-197:15-180) 10 20 30 40 50 60 pF1KE3 MSDLRITEAFLYMDYLCFRALCCKGPPPARPEYDLVCIGLTGSGKTSLLSKLCSESPDNV . :. .. .:: ..:::..: :: .. NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT 10 20 30 40 70 80 90 100 110 120 pF1KE3 VSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLEAAR . : ::....: ..: ..: ..:: :.:: : .:.:..::.:::.:: . : .. :: NP_001 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER-VNEAR 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 NELHSALQHPQLCTLPFLILANHQDKPAARSVQEIKKYFELEPLARGKRWILQPCSLDDM .:: : . .: .:..::.:: : : .. :: . :. : : . : .: . NP_001 EELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHRNWYIQATCATSG 110 120 130 140 150 160 190 200 pF1KE3 DALKDSFSQLINLLEEKDHEAVRM :.: .... : : :... NP_001 DGLYEGLDWLSNQLRNQK 170 180 >>NP_001019398 (OMIM: 103180) ADP-ribosylation factor 1 (181 aa) initn: 213 init1: 213 opt: 315 Z-score: 379.0 bits: 76.9 E(85289): 2.3e-14 Smith-Waterman score: 315; 33.3% identity (65.5% similar) in 168 aa overlap (30-197:15-180) 10 20 30 40 50 60 pF1KE3 MSDLRITEAFLYMDYLCFRALCCKGPPPARPEYDLVCIGLTGSGKTSLLSKLCSESPDNV . :. .. .:: ..:::..: :: .. NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT 10 20 30 40 70 80 90 100 110 120 pF1KE3 VSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLEAAR . : ::....: ..: ..: ..:: :.:: : .:.:..::.:::.:: . : .. :: NP_001 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER-VNEAR 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 NELHSALQHPQLCTLPFLILANHQDKPAARSVQEIKKYFELEPLARGKRWILQPCSLDDM .:: : . .: .:..::.:: : : .. :: . :. : : . : .: . NP_001 EELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHRNWYIQATCATSG 110 120 130 140 150 160 190 200 pF1KE3 DALKDSFSQLINLLEEKDHEAVRM :.: .... : : :... NP_001 DGLYEGLDWLSNQLRNQK 170 180 >>NP_001019397 (OMIM: 103180) ADP-ribosylation factor 1 (181 aa) initn: 213 init1: 213 opt: 315 Z-score: 379.0 bits: 76.9 E(85289): 2.3e-14 Smith-Waterman score: 315; 33.3% identity (65.5% similar) in 168 aa overlap (30-197:15-180) 10 20 30 40 50 60 pF1KE3 MSDLRITEAFLYMDYLCFRALCCKGPPPARPEYDLVCIGLTGSGKTSLLSKLCSESPDNV . :. .. .:: ..:::..: :: .. NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT 10 20 30 40 70 80 90 100 110 120 pF1KE3 VSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLEAAR . : ::....: ..: ..: ..:: :.:: : .:.:..::.:::.:: . : .. :: NP_001 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER-VNEAR 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 NELHSALQHPQLCTLPFLILANHQDKPAARSVQEIKKYFELEPLARGKRWILQPCSLDDM .:: : . .: .:..::.:: : : .. :: . :. : : . : .: . NP_001 EELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHRNWYIQATCATSG 110 120 130 140 150 160 190 200 pF1KE3 DALKDSFSQLINLLEEKDHEAVRM :.: .... : : :... NP_001 DGLYEGLDWLSNQLRNQK 170 180 >>NP_001649 (OMIM: 103180) ADP-ribosylation factor 1 [Ho (181 aa) initn: 213 init1: 213 opt: 315 Z-score: 379.0 bits: 76.9 E(85289): 2.3e-14 Smith-Waterman score: 315; 33.3% identity (65.5% similar) in 168 aa overlap (30-197:15-180) 10 20 30 40 50 60 pF1KE3 MSDLRITEAFLYMDYLCFRALCCKGPPPARPEYDLVCIGLTGSGKTSLLSKLCSESPDNV . :. .. .:: ..:::..: :: .. NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT 10 20 30 40 70 80 90 100 110 120 pF1KE3 VSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLEAAR . : ::....: ..: ..: ..:: :.:: : .:.:..::.:::.:: . : .. :: NP_001 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER-VNEAR 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 NELHSALQHPQLCTLPFLILANHQDKPAARSVQEIKKYFELEPLARGKRWILQPCSLDDM .:: : . .: .:..::.:: : : .. :: . :. : : . : .: . NP_001 EELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHRNWYIQATCATSG 110 120 130 140 150 160 190 200 pF1KE3 DALKDSFSQLINLLEEKDHEAVRM :.: .... : : :... NP_001 DGLYEGLDWLSNQLRNQK 170 180 >>NP_001653 (OMIM: 103188) ADP-ribosylation factor 5 [Ho (180 aa) initn: 287 init1: 202 opt: 314 Z-score: 377.8 bits: 76.7 E(85289): 2.6e-14 Smith-Waterman score: 314; 32.7% identity (66.1% similar) in 168 aa overlap (30-197:15-180) 10 20 30 40 50 60 pF1KE3 MSDLRITEAFLYMDYLCFRALCCKGPPPARPEYDLVCIGLTGSGKTSLLSKLCSESPDNV . .. .. .:: ..:::..: :: .. NP_001 MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTT 10 20 30 40 70 80 90 100 110 120 pF1KE3 VSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLEAAR . : ::....: ..: ..: ..:: :.:: : .:.:..::.:::.:: . : :.: NP_001 IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESA- 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 NELHSALQHPQLCTLPFLILANHQDKPAARSVQEIKKYFELEPLARGKRWILQPCSLDDM .::.. ::. .: .:..::.:: : : :.:. . :. : :.. : .: . NP_001 DELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHL-RSRTWYVQATCATQG 110 120 130 140 150 160 190 200 pF1KE3 DALKDSFSQLINLLEEKDHEAVRM .: :... : . : .. NP_001 TGLYDGLDWLSHELSKR 170 180 >>NP_004302 (OMIM: 604695) ADP-ribosylation factor-like (182 aa) initn: 275 init1: 214 opt: 314 Z-score: 377.8 bits: 76.7 E(85289): 2.6e-14 Smith-Waterman score: 314; 35.0% identity (70.7% similar) in 157 aa overlap (32-188:17-171) 10 20 30 40 50 60 pF1KE3 SDLRITEAFLYMDYLCFRALCCKGPPPARPEYDLVCIGLTGSGKTSLLSKLCSESPDNVV : .. .:: ..:::.::..: ::. .... NP_004 MGLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDISHIT 10 20 30 40 70 80 90 100 110 120 pF1KE3 STTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLEAARN : ::.::.: :. ::: ..:: .:: ::. :..... .:.:.:::. . .: . . NP_004 PTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWKNYFENTDILIYVIDSADRKR-FEETGQ 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 ELHSALQHPQLCTLPFLILANHQDKPAARSVQEIKKYFELEPLARGKRWILQPCSLDDMD :: :.. .: .: ::.::.:: .: ..:: . ..:. . : . : .: :: . NP_004 ELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTI-RDRVWQIQSCSALTGE 110 120 130 140 150 160 190 200 pF1KE3 ALKDSFSQLINLLEEKDHEAVRM ...:... NP_004 GVQDGMNWVCKNVNAKKK 170 180 204 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 08:21:18 2016 done: Sun Nov 6 08:21:19 2016 Total Scan time: 5.880 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]