FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE2681, 366 aa
  1>>>pF1KE2681     366 - 366 aa - 366 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.8870+/-0.000711; mu= 14.5296+/- 0.042
 mean_var=94.7261+/-19.115, 0's: 0 Z-trim(111.2): 36  B-trim: 0 in 0/53
 Lambda= 0.131777
 statistics sampled from 12207 (12231) to 12207 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.737), E-opt: 0.2 (0.376), width:  16
 Scan time:  2.930

The best scores are:                                      opt bits E(32554)
CCDS76421.1 WDR74 gene_id:54663|Hs108|chr11        ( 366) 2538 492.4 2.6e-139
CCDS44630.1 WDR74 gene_id:54663|Hs108|chr11        ( 385) 2144 417.5 9.4e-117


>>CCDS76421.1 WDR74 gene_id:54663|Hs108|chr11             (366 aa)
 initn: 2538 init1: 2538 opt: 2538  Z-score: 2614.7  bits: 492.4 E(32554): 2.6e-139
Smith-Waterman score: 2538; 100.0% identity (100.0% similar) in 366 aa overlap (1-366:1-366)

               10        20        30        40        50        60
pF1KE2 MAAAAARWNHVWVGTETGILKGVNLQRKQAANFTAGGQPRREEAVSALCWGTGGETQMLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 MAAAAARWNHVWVGTETGILKGVNLQRKQAANFTAGGQPRREEAVSALCWGTGGETQMLV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 GCADRTVKHFSTEDGIFQGQRHCPGGEGMFRGLAQADGTLITCVDSGILRVWHDKDKDTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 GCADRTVKHFSTEDGIFQGQRHCPGGEGMFRGLAQADGTLITCVDSGILRVWHDKDKDTS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 SDPLLELRVGPGVCRMRQDPAHPHVVATGGKENALKIWDLQGSEEPVFRAKNVRNDWLDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 SDPLLELRVGPGVCRMRQDPAHPHVVATGGKENALKIWDLQGSEEPVFRAKNVRNDWLDL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 RVPIWDQDIQFLPGSQKLVTCTGYHQVRVYDPASPQRRPVLETTYGEYPLTAMTLTPGGN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 RVPIWDQDIQFLPGSQKLVTCTGYHQVRVYDPASPQRRPVLETTYGEYPLTAMTLTPGGN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 SVIVGNTHGQLAEIDLRQGRLLGCLKGLAGSVRGLQCHPSKPLLASCGLDRVLRIHRIQN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 SVIVGNTHGQLAEIDLRQGRLLGCLKGLAGSVRGLQCHPSKPLLASCGLDRVLRIHRIQN
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE2 PRGLEHKDEPQEPQEPNKVPLEDTETDELWASLEAAAKRKLSGLEQPQGALQTRRRKKKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 PRGLEHKDEPQEPQEPNKVPLEDTETDELWASLEAAAKRKLSGLEQPQGALQTRRRKKKR
              310       320       330       340       350       360

             
pF1KE2 PGSTSP
       ::::::
CCDS76 PGSTSP
             

>>CCDS44630.1 WDR74 gene_id:54663|Hs108|chr11             (385 aa)
 initn: 2170 init1: 2144 opt: 2144  Z-score: 2209.6  bits: 417.5 E(32554): 9.4e-117
Smith-Waterman score: 2490; 95.1% identity (95.1% similar) in 385 aa overlap (1-366:1-385)

               10        20        30        40        50        60
pF1KE2 MAAAAARWNHVWVGTETGILKGVNLQRKQAANFTAGGQPRREEAVSALCWGTGGETQMLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MAAAAARWNHVWVGTETGILKGVNLQRKQAANFTAGGQPRREEAVSALCWGTGGETQMLV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 GCADRTVKHFSTEDGIFQGQRHCPGGEGMFRGLAQADGTLITCVDSGILRVWHDKDKDTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GCADRTVKHFSTEDGIFQGQRHCPGGEGMFRGLAQADGTLITCVDSGILRVWHDKDKDTS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 SDPLLELRVGPGVCRMRQDPAHPHVVATGGKENALKIWDLQGSEEPVFRAKNVRNDWLDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SDPLLELRVGPGVCRMRQDPAHPHVVATGGKENALKIWDLQGSEEPVFRAKNVRNDWLDL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 RVPIWDQDIQFLPGSQKLVTCTGYHQVRVYDPASPQRRPVLETTYGEYPLTAMTLTPGGN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 RVPIWDQDIQFLPGSQKLVTCTGYHQVRVYDPASPQRRPVLETTYGEYPLTAMTLTPGGN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 SVIVGNTHGQLAEIDLRQGRLLGCLKGLAGSVRGLQCHPSKPLLASCGLDRVLRIHRIQN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SVIVGNTHGQLAEIDLRQGRLLGCLKGLAGSVRGLQCHPSKPLLASCGLDRVLRIHRIQN
              250       260       270       280       290       300

                                 310       320       330       340 
pF1KE2 PRGLEHK-------------------DEPQEPQEPNKVPLEDTETDELWASLEAAAKRKL
       :::::::                   ::::::::::::::::::::::::::::::::::
CCDS44 PRGLEHKVYLKSQLNCLLLSGRDNWEDEPQEPQEPNKVPLEDTETDELWASLEAAAKRKL
              310       320       330       340       350       360

             350       360      
pF1KE2 SGLEQPQGALQTRRRKKKRPGSTSP
       :::::::::::::::::::::::::
CCDS44 SGLEQPQGALQTRRRKKKRPGSTSP
              370       380     




366 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Mar 10 10:41:00 2017 done: Fri Mar 10 10:41:01 2017
 Total Scan time:  2.930 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]