FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3968, 405 aa 1>>>pF1KE3968 405 - 405 aa - 405 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.0588+/-0.000409; mu= 9.1274+/- 0.026 mean_var=124.0206+/-24.602, 0's: 0 Z-trim(115.1): 53 B-trim: 33 in 1/48 Lambda= 0.115167 statistics sampled from 25216 (25269) to 25216 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.649), E-opt: 0.2 (0.296), width: 16 Scan time: 7.390 The best scores are: opt bits E(85289) NP_006686 (OMIM: 605448) RUN domain-containing pro ( 405) 2641 450.2 4.3e-126 NP_001138297 (OMIM: 605448) RUN domain-containing ( 446) 2608 444.7 2.1e-124 XP_016879527 (OMIM: 605448) PREDICTED: RUN domain- ( 434) 2603 443.9 3.6e-124 XP_016879528 (OMIM: 605448) PREDICTED: RUN domain- ( 433) 2600 443.4 5.1e-124 XP_016879524 (OMIM: 605448) PREDICTED: RUN domain- ( 474) 2600 443.4 5.5e-124 XP_016879529 (OMIM: 605448) PREDICTED: RUN domain- ( 401) 2590 441.7 1.5e-123 NP_001138298 (OMIM: 605448) RUN domain-containing ( 400) 2583 440.5 3.4e-123 XP_005257021 (OMIM: 605448) PREDICTED: RUN domain- ( 441) 2550 435.1 1.6e-121 XP_016879525 (OMIM: 605448) PREDICTED: RUN domain- ( 470) 2549 434.9 1.9e-121 XP_016879526 (OMIM: 605448) PREDICTED: RUN domain- ( 469) 2542 433.7 4.3e-121 NP_001124181 (OMIM: 611194) protein RUFY3 isoform ( 506) 365 72.1 3.6e-12 XP_011530058 (OMIM: 611194) PREDICTED: protein RUF ( 518) 365 72.1 3.6e-12 XP_011530057 (OMIM: 611194) PREDICTED: protein RUF ( 529) 365 72.1 3.7e-12 XP_011530056 (OMIM: 611194) PREDICTED: protein RUF ( 586) 365 72.1 4e-12 XP_016863379 (OMIM: 611194) PREDICTED: protein RUF ( 587) 365 72.1 4e-12 XP_011530055 (OMIM: 611194) PREDICTED: protein RUF ( 621) 365 72.1 4.2e-12 XP_011530054 (OMIM: 611194) PREDICTED: protein RUF ( 621) 365 72.1 4.2e-12 XP_011530053 (OMIM: 611194) PREDICTED: protein RUF ( 657) 365 72.1 4.4e-12 XP_011530052 (OMIM: 611194) PREDICTED: protein RUF ( 680) 365 72.1 4.5e-12 XP_016863381 (OMIM: 611194) PREDICTED: protein RUF ( 405) 361 71.3 4.7e-12 NP_001332769 (OMIM: 611194) protein RUFY3 isoform ( 416) 361 71.3 4.8e-12 NP_055776 (OMIM: 611194) protein RUFY3 isoform 2 [ ( 469) 361 71.4 5.3e-12 NP_001278923 (OMIM: 611194) protein RUFY3 isoform ( 487) 361 71.4 5.5e-12 XP_006714984 (OMIM: 610327) PREDICTED: RUN and FYV ( 686) 363 71.8 5.7e-12 XP_005265715 (OMIM: 611194) PREDICTED: protein RUF ( 556) 361 71.4 6.1e-12 NP_001278922 (OMIM: 611194) protein RUFY3 isoform ( 567) 361 71.4 6.2e-12 NP_001032519 (OMIM: 611194) protein RUFY3 isoform ( 620) 361 71.4 6.6e-12 XP_005265713 (OMIM: 611194) PREDICTED: protein RUF ( 638) 361 71.5 6.8e-12 XP_016865380 (OMIM: 610327) PREDICTED: RUN and FYV ( 578) 355 70.4 1.3e-11 XP_005270013 (OMIM: 610328) PREDICTED: RUN and FYV ( 585) 352 69.9 1.8e-11 NP_079434 (OMIM: 610327) RUN and FYVE domain-conta ( 708) 340 68.0 8.3e-11 NP_060457 (OMIM: 610328) RUN and FYVE domain-conta ( 641) 339 67.8 8.6e-11 XP_011538244 (OMIM: 610328) PREDICTED: RUN and FYV ( 606) 337 67.5 1e-10 NP_001317032 (OMIM: 610328) RUN and FYVE domain-co ( 606) 337 67.5 1e-10 NP_001035542 (OMIM: 610327) RUN and FYVE domain-co ( 600) 332 66.6 1.8e-10 NP_001035541 (OMIM: 610327) RUN and FYVE domain-co ( 600) 332 66.6 1.8e-10 XP_005270012 (OMIM: 610328) PREDICTED: RUN and FYV ( 590) 298 61.0 9e-09 NP_001265154 (OMIM: 610328) RUN and FYVE domain-co ( 379) 272 56.5 1.3e-07 NP_078789 (OMIM: 607182,610019) FYVE and coiled-co (1478) 219 48.1 0.00017 XP_006713396 (OMIM: 607182,610019) PREDICTED: FYVE (1478) 219 48.1 0.00017 XP_006713397 (OMIM: 607182,610019) PREDICTED: FYVE (1478) 219 48.1 0.00017 XP_011532413 (OMIM: 607182,610019) PREDICTED: FYVE (1478) 219 48.1 0.00017 NP_001035882 (OMIM: 610328) RUN and FYVE domain-co ( 403) 203 45.1 0.00037 XP_005270014 (OMIM: 610328) PREDICTED: RUN and FYV ( 572) 203 45.2 0.0005 XP_005270010 (OMIM: 610328) PREDICTED: RUN and FYV ( 607) 203 45.2 0.00052 >>NP_006686 (OMIM: 605448) RUN domain-containing protein (405 aa) initn: 2641 init1: 2641 opt: 2641 Z-score: 2384.7 bits: 450.2 E(85289): 4.3e-126 Smith-Waterman score: 2641; 100.0% identity (100.0% similar) in 405 aa overlap (1-405:1-405) 10 20 30 40 50 60 pF1KE3 MEASFVQTTMALGLSSKKASSRNVAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 MEASFVQTTMALGLSSKKASSRNVAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 FAAILEQILSHRFKACAPAGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENIST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 FAAILEQILSHRFKACAPAGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENIST 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 ARAKGRAWIRVALMEKRMSEYITTALRDTRTTRRFYDSGAIMLRDEATILTGMLIGLSAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 ARAKGRAWIRVALMEKRMSEYITTALRDTRTTRRFYDSGAIMLRDEATILTGMLIGLSAI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 DFSFCLKGEVLDGKTPVVIDYTPYLKFTQSYDYLTDEEERHSAESSTSEDNSPEHPYLPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 DFSFCLKGEVLDGKTPVVIDYTPYLKFTQSYDYLTDEEERHSAESSTSEDNSPEHPYLPL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 VTDEDSWYSKWHKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQLEEAAAQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 VTDEDSWYSKWHKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQLEEAAAQN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 QREKRELEGVILELQEQLTGLIPSDHAPLAQGSKELTTPLVNQWPSLGTLNGAEGASNSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 QREKRELEGVILELQEQLTGLIPSDHAPLAQGSKELTTPLVNQWPSLGTLNGAEGASNSK 310 320 330 340 350 360 370 380 390 400 pF1KE3 LYRRHSFMSTEPLSAEASLSSDSQRLGEGTRDEEPWGPIGSSEPN ::::::::::::::::::::::::::::::::::::::::::::: NP_006 LYRRHSFMSTEPLSAEASLSSDSQRLGEGTRDEEPWGPIGSSEPN 370 380 390 400 >>NP_001138297 (OMIM: 605448) RUN domain-containing prot (446 aa) initn: 2608 init1: 2608 opt: 2608 Z-score: 2354.5 bits: 444.7 E(85289): 2.1e-124 Smith-Waterman score: 2608; 100.0% identity (100.0% similar) in 400 aa overlap (1-400:1-400) 10 20 30 40 50 60 pF1KE3 MEASFVQTTMALGLSSKKASSRNVAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MEASFVQTTMALGLSSKKASSRNVAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 FAAILEQILSHRFKACAPAGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENIST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FAAILEQILSHRFKACAPAGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENIST 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 ARAKGRAWIRVALMEKRMSEYITTALRDTRTTRRFYDSGAIMLRDEATILTGMLIGLSAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ARAKGRAWIRVALMEKRMSEYITTALRDTRTTRRFYDSGAIMLRDEATILTGMLIGLSAI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 DFSFCLKGEVLDGKTPVVIDYTPYLKFTQSYDYLTDEEERHSAESSTSEDNSPEHPYLPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DFSFCLKGEVLDGKTPVVIDYTPYLKFTQSYDYLTDEEERHSAESSTSEDNSPEHPYLPL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 VTDEDSWYSKWHKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQLEEAAAQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VTDEDSWYSKWHKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQLEEAAAQN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 QREKRELEGVILELQEQLTGLIPSDHAPLAQGSKELTTPLVNQWPSLGTLNGAEGASNSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QREKRELEGVILELQEQLTGLIPSDHAPLAQGSKELTTPLVNQWPSLGTLNGAEGASNSK 310 320 330 340 350 360 370 380 390 400 pF1KE3 LYRRHSFMSTEPLSAEASLSSDSQRLGEGTRDEEPWGPIGSSEPN :::::::::::::::::::::::::::::::::::::::: NP_001 LYRRHSFMSTEPLSAEASLSSDSQRLGEGTRDEEPWGPIGKDPTPSMLGLCGSLASIPSC 370 380 390 400 410 420 NP_001 KSLASFKSNECLVSDSPEGSPALSPS 430 440 >>XP_016879527 (OMIM: 605448) PREDICTED: RUN domain-cont (434 aa) initn: 2600 init1: 2600 opt: 2603 Z-score: 2350.2 bits: 443.9 E(85289): 3.6e-124 Smith-Waterman score: 2603; 99.3% identity (99.5% similar) in 403 aa overlap (1-403:1-403) 10 20 30 40 50 60 pF1KE3 MEASFVQTTMALGLSSKKASSRNVAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MEASFVQTTMALGLSSKKASSRNVAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 FAAILEQILSHRFKACAPAGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENIST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FAAILEQILSHRFKACAPAGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENIST 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 ARAKGRAWIRVALMEKRMSEYITTALRDTRTTRRFYDSGAIMLRDEATILTGMLIGLSAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ARAKGRAWIRVALMEKRMSEYITTALRDTRTTRRFYDSGAIMLRDEATILTGMLIGLSAI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 DFSFCLKGEVLDGKTPVVIDYTPYLKFTQSYDYLTDEEERHSAESSTSEDNSPEHPYLPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DFSFCLKGEVLDGKTPVVIDYTPYLKFTQSYDYLTDEEERHSAESSTSEDNSPEHPYLPL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 VTDEDSWYSKWHKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQLEEAAAQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VTDEDSWYSKWHKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQLEEAAAQN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 QREKRELEGVILELQEQLTGLIPSDHAPLAQGSKELTTPLVNQWPSLGTLNGAEGASNSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QREKRELEGVILELQEQLTGLIPSDHAPLAQGSKELTTPLVNQWPSLGTLNGAEGASNSK 310 320 330 340 350 360 370 380 390 400 pF1KE3 LYRRHSFMSTEPLSAEASLSSDSQRLGEGTRDEEPWGPIGSSEPN ::::::::::::::::::::::::::::::::::::::: .: XP_016 LYRRHSFMSTEPLSAEASLSSDSQRLGEGTRDEEPWGPIVETEFRQAGLELLTSSDSPTL 370 380 390 400 410 420 XP_016 ASQSAGITGSSEPN 430 >>XP_016879528 (OMIM: 605448) PREDICTED: RUN domain-cont (433 aa) initn: 2600 init1: 2600 opt: 2600 Z-score: 2347.5 bits: 443.4 E(85289): 5.1e-124 Smith-Waterman score: 2600; 100.0% identity (100.0% similar) in 399 aa overlap (1-399:1-399) 10 20 30 40 50 60 pF1KE3 MEASFVQTTMALGLSSKKASSRNVAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MEASFVQTTMALGLSSKKASSRNVAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 FAAILEQILSHRFKACAPAGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENIST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FAAILEQILSHRFKACAPAGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENIST 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 ARAKGRAWIRVALMEKRMSEYITTALRDTRTTRRFYDSGAIMLRDEATILTGMLIGLSAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ARAKGRAWIRVALMEKRMSEYITTALRDTRTTRRFYDSGAIMLRDEATILTGMLIGLSAI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 DFSFCLKGEVLDGKTPVVIDYTPYLKFTQSYDYLTDEEERHSAESSTSEDNSPEHPYLPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DFSFCLKGEVLDGKTPVVIDYTPYLKFTQSYDYLTDEEERHSAESSTSEDNSPEHPYLPL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 VTDEDSWYSKWHKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQLEEAAAQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VTDEDSWYSKWHKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQLEEAAAQN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 QREKRELEGVILELQEQLTGLIPSDHAPLAQGSKELTTPLVNQWPSLGTLNGAEGASNSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QREKRELEGVILELQEQLTGLIPSDHAPLAQGSKELTTPLVNQWPSLGTLNGAEGASNSK 310 320 330 340 350 360 370 380 390 400 pF1KE3 LYRRHSFMSTEPLSAEASLSSDSQRLGEGTRDEEPWGPIGSSEPN ::::::::::::::::::::::::::::::::::::::: XP_016 LYRRHSFMSTEPLSAEASLSSDSQRLGEGTRDEEPWGPIETEFRQAGLELLTSSDSPTLA 370 380 390 400 410 420 XP_016 SQSAGITGSSEPN 430 >>XP_016879524 (OMIM: 605448) PREDICTED: RUN domain-cont (474 aa) initn: 2600 init1: 2600 opt: 2600 Z-score: 2346.9 bits: 443.4 E(85289): 5.5e-124 Smith-Waterman score: 2600; 100.0% identity (100.0% similar) in 399 aa overlap (1-399:1-399) 10 20 30 40 50 60 pF1KE3 MEASFVQTTMALGLSSKKASSRNVAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MEASFVQTTMALGLSSKKASSRNVAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 FAAILEQILSHRFKACAPAGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENIST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FAAILEQILSHRFKACAPAGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENIST 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 ARAKGRAWIRVALMEKRMSEYITTALRDTRTTRRFYDSGAIMLRDEATILTGMLIGLSAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ARAKGRAWIRVALMEKRMSEYITTALRDTRTTRRFYDSGAIMLRDEATILTGMLIGLSAI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 DFSFCLKGEVLDGKTPVVIDYTPYLKFTQSYDYLTDEEERHSAESSTSEDNSPEHPYLPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DFSFCLKGEVLDGKTPVVIDYTPYLKFTQSYDYLTDEEERHSAESSTSEDNSPEHPYLPL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 VTDEDSWYSKWHKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQLEEAAAQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VTDEDSWYSKWHKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQLEEAAAQN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 QREKRELEGVILELQEQLTGLIPSDHAPLAQGSKELTTPLVNQWPSLGTLNGAEGASNSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QREKRELEGVILELQEQLTGLIPSDHAPLAQGSKELTTPLVNQWPSLGTLNGAEGASNSK 310 320 330 340 350 360 370 380 390 400 pF1KE3 LYRRHSFMSTEPLSAEASLSSDSQRLGEGTRDEEPWGPIGSSEPN ::::::::::::::::::::::::::::::::::::::: XP_016 LYRRHSFMSTEPLSAEASLSSDSQRLGEGTRDEEPWGPIETEFRQAGLELLTSSDSPTLA 370 380 390 400 410 420 XP_016 SQSAGITGKDPTPSMLGLCGSLASIPSCKSLASFKSNECLVSDSPEGSPALSPS 430 440 450 460 470 >>XP_016879529 (OMIM: 605448) PREDICTED: RUN domain-cont (401 aa) initn: 2158 init1: 2158 opt: 2590 Z-score: 2339.0 bits: 441.7 E(85289): 1.5e-123 Smith-Waterman score: 2590; 99.0% identity (99.0% similar) in 405 aa overlap (1-405:1-401) 10 20 30 40 50 60 pF1KE3 MEASFVQTTMALGLSSKKASSRNVAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MEASFVQTTMALGLSSKKASSRNVAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 FAAILEQILSHRFKACAPAGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENIST ::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: XP_016 FAAILEQILSHRFKA----GPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENIST 70 80 90 100 110 130 140 150 160 170 180 pF1KE3 ARAKGRAWIRVALMEKRMSEYITTALRDTRTTRRFYDSGAIMLRDEATILTGMLIGLSAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ARAKGRAWIRVALMEKRMSEYITTALRDTRTTRRFYDSGAIMLRDEATILTGMLIGLSAI 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE3 DFSFCLKGEVLDGKTPVVIDYTPYLKFTQSYDYLTDEEERHSAESSTSEDNSPEHPYLPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DFSFCLKGEVLDGKTPVVIDYTPYLKFTQSYDYLTDEEERHSAESSTSEDNSPEHPYLPL 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE3 VTDEDSWYSKWHKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQLEEAAAQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VTDEDSWYSKWHKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQLEEAAAQN 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE3 QREKRELEGVILELQEQLTGLIPSDHAPLAQGSKELTTPLVNQWPSLGTLNGAEGASNSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QREKRELEGVILELQEQLTGLIPSDHAPLAQGSKELTTPLVNQWPSLGTLNGAEGASNSK 300 310 320 330 340 350 370 380 390 400 pF1KE3 LYRRHSFMSTEPLSAEASLSSDSQRLGEGTRDEEPWGPIGSSEPN ::::::::::::::::::::::::::::::::::::::::::::: XP_016 LYRRHSFMSTEPLSAEASLSSDSQRLGEGTRDEEPWGPIGSSEPN 360 370 380 390 400 >>NP_001138298 (OMIM: 605448) RUN domain-containing prot (400 aa) initn: 2589 init1: 2153 opt: 2583 Z-score: 2332.7 bits: 440.5 E(85289): 3.4e-123 Smith-Waterman score: 2583; 98.8% identity (98.8% similar) in 405 aa overlap (1-405:1-400) 10 20 30 40 50 60 pF1KE3 MEASFVQTTMALGLSSKKASSRNVAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MEASFVQTTMALGLSSKKASSRNVAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 FAAILEQILSHRFKACAPAGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENIST :::::::::::::: ::::::::::::::::::::::::::::::::::::::::: NP_001 FAAILEQILSHRFK-----GPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENIST 70 80 90 100 110 130 140 150 160 170 180 pF1KE3 ARAKGRAWIRVALMEKRMSEYITTALRDTRTTRRFYDSGAIMLRDEATILTGMLIGLSAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ARAKGRAWIRVALMEKRMSEYITTALRDTRTTRRFYDSGAIMLRDEATILTGMLIGLSAI 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE3 DFSFCLKGEVLDGKTPVVIDYTPYLKFTQSYDYLTDEEERHSAESSTSEDNSPEHPYLPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DFSFCLKGEVLDGKTPVVIDYTPYLKFTQSYDYLTDEEERHSAESSTSEDNSPEHPYLPL 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE3 VTDEDSWYSKWHKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQLEEAAAQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VTDEDSWYSKWHKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQLEEAAAQN 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE3 QREKRELEGVILELQEQLTGLIPSDHAPLAQGSKELTTPLVNQWPSLGTLNGAEGASNSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QREKRELEGVILELQEQLTGLIPSDHAPLAQGSKELTTPLVNQWPSLGTLNGAEGASNSK 300 310 320 330 340 350 370 380 390 400 pF1KE3 LYRRHSFMSTEPLSAEASLSSDSQRLGEGTRDEEPWGPIGSSEPN ::::::::::::::::::::::::::::::::::::::::::::: NP_001 LYRRHSFMSTEPLSAEASLSSDSQRLGEGTRDEEPWGPIGSSEPN 360 370 380 390 400 >>XP_005257021 (OMIM: 605448) PREDICTED: RUN domain-cont (441 aa) initn: 2556 init1: 2120 opt: 2550 Z-score: 2302.5 bits: 435.1 E(85289): 1.6e-121 Smith-Waterman score: 2550; 98.8% identity (98.8% similar) in 400 aa overlap (1-400:1-395) 10 20 30 40 50 60 pF1KE3 MEASFVQTTMALGLSSKKASSRNVAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MEASFVQTTMALGLSSKKASSRNVAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 FAAILEQILSHRFKACAPAGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENIST :::::::::::::: ::::::::::::::::::::::::::::::::::::::::: XP_005 FAAILEQILSHRFK-----GPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENIST 70 80 90 100 110 130 140 150 160 170 180 pF1KE3 ARAKGRAWIRVALMEKRMSEYITTALRDTRTTRRFYDSGAIMLRDEATILTGMLIGLSAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ARAKGRAWIRVALMEKRMSEYITTALRDTRTTRRFYDSGAIMLRDEATILTGMLIGLSAI 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE3 DFSFCLKGEVLDGKTPVVIDYTPYLKFTQSYDYLTDEEERHSAESSTSEDNSPEHPYLPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 DFSFCLKGEVLDGKTPVVIDYTPYLKFTQSYDYLTDEEERHSAESSTSEDNSPEHPYLPL 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE3 VTDEDSWYSKWHKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQLEEAAAQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VTDEDSWYSKWHKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQLEEAAAQN 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE3 QREKRELEGVILELQEQLTGLIPSDHAPLAQGSKELTTPLVNQWPSLGTLNGAEGASNSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QREKRELEGVILELQEQLTGLIPSDHAPLAQGSKELTTPLVNQWPSLGTLNGAEGASNSK 300 310 320 330 340 350 370 380 390 400 pF1KE3 LYRRHSFMSTEPLSAEASLSSDSQRLGEGTRDEEPWGPIGSSEPN :::::::::::::::::::::::::::::::::::::::: XP_005 LYRRHSFMSTEPLSAEASLSSDSQRLGEGTRDEEPWGPIGKDPTPSMLGLCGSLASIPSC 360 370 380 390 400 410 XP_005 KSLASFKSNECLVSDSPEGSPALSPS 420 430 440 >>XP_016879525 (OMIM: 605448) PREDICTED: RUN domain-cont (470 aa) initn: 2117 init1: 2117 opt: 2549 Z-score: 2301.2 bits: 434.9 E(85289): 1.9e-121 Smith-Waterman score: 2549; 99.0% identity (99.0% similar) in 399 aa overlap (1-399:1-395) 10 20 30 40 50 60 pF1KE3 MEASFVQTTMALGLSSKKASSRNVAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MEASFVQTTMALGLSSKKASSRNVAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 FAAILEQILSHRFKACAPAGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENIST ::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: XP_016 FAAILEQILSHRFKA----GPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENIST 70 80 90 100 110 130 140 150 160 170 180 pF1KE3 ARAKGRAWIRVALMEKRMSEYITTALRDTRTTRRFYDSGAIMLRDEATILTGMLIGLSAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ARAKGRAWIRVALMEKRMSEYITTALRDTRTTRRFYDSGAIMLRDEATILTGMLIGLSAI 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE3 DFSFCLKGEVLDGKTPVVIDYTPYLKFTQSYDYLTDEEERHSAESSTSEDNSPEHPYLPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DFSFCLKGEVLDGKTPVVIDYTPYLKFTQSYDYLTDEEERHSAESSTSEDNSPEHPYLPL 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE3 VTDEDSWYSKWHKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQLEEAAAQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VTDEDSWYSKWHKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQLEEAAAQN 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE3 QREKRELEGVILELQEQLTGLIPSDHAPLAQGSKELTTPLVNQWPSLGTLNGAEGASNSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QREKRELEGVILELQEQLTGLIPSDHAPLAQGSKELTTPLVNQWPSLGTLNGAEGASNSK 300 310 320 330 340 350 370 380 390 400 pF1KE3 LYRRHSFMSTEPLSAEASLSSDSQRLGEGTRDEEPWGPIGSSEPN ::::::::::::::::::::::::::::::::::::::: XP_016 LYRRHSFMSTEPLSAEASLSSDSQRLGEGTRDEEPWGPIETEFRQAGLELLTSSDSPTLA 360 370 380 390 400 410 XP_016 SQSAGITGKDPTPSMLGLCGSLASIPSCKSLASFKSNECLVSDSPEGSPALSPS 420 430 440 450 460 470 >>XP_016879526 (OMIM: 605448) PREDICTED: RUN domain-cont (469 aa) initn: 2548 init1: 2112 opt: 2542 Z-score: 2294.9 bits: 433.7 E(85289): 4.3e-121 Smith-Waterman score: 2542; 98.7% identity (98.7% similar) in 399 aa overlap (1-399:1-394) 10 20 30 40 50 60 pF1KE3 MEASFVQTTMALGLSSKKASSRNVAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MEASFVQTTMALGLSSKKASSRNVAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 FAAILEQILSHRFKACAPAGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENIST :::::::::::::: ::::::::::::::::::::::::::::::::::::::::: XP_016 FAAILEQILSHRFK-----GPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENIST 70 80 90 100 110 130 140 150 160 170 180 pF1KE3 ARAKGRAWIRVALMEKRMSEYITTALRDTRTTRRFYDSGAIMLRDEATILTGMLIGLSAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ARAKGRAWIRVALMEKRMSEYITTALRDTRTTRRFYDSGAIMLRDEATILTGMLIGLSAI 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE3 DFSFCLKGEVLDGKTPVVIDYTPYLKFTQSYDYLTDEEERHSAESSTSEDNSPEHPYLPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DFSFCLKGEVLDGKTPVVIDYTPYLKFTQSYDYLTDEEERHSAESSTSEDNSPEHPYLPL 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE3 VTDEDSWYSKWHKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQLEEAAAQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VTDEDSWYSKWHKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQLEEAAAQN 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE3 QREKRELEGVILELQEQLTGLIPSDHAPLAQGSKELTTPLVNQWPSLGTLNGAEGASNSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QREKRELEGVILELQEQLTGLIPSDHAPLAQGSKELTTPLVNQWPSLGTLNGAEGASNSK 300 310 320 330 340 350 370 380 390 400 pF1KE3 LYRRHSFMSTEPLSAEASLSSDSQRLGEGTRDEEPWGPIGSSEPN ::::::::::::::::::::::::::::::::::::::: XP_016 LYRRHSFMSTEPLSAEASLSSDSQRLGEGTRDEEPWGPIETEFRQAGLELLTSSDSPTLA 360 370 380 390 400 410 XP_016 SQSAGITGKDPTPSMLGLCGSLASIPSCKSLASFKSNECLVSDSPEGSPALSPS 420 430 440 450 460 405 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 19:16:32 2016 done: Mon Nov 7 19:16:33 2016 Total Scan time: 7.390 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]