FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB9894, 3661 aa 1>>>pF1KB9894 3661 - 3661 aa - 3661 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.4698+/-0.00129; mu= 21.5078+/- 0.078 mean_var=87.2173+/-16.991, 0's: 0 Z-trim(101.8): 51 B-trim: 10 in 1/47 Lambda= 0.137332 statistics sampled from 6655 (6683) to 6655 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.533), E-opt: 0.2 (0.205), width: 16 Scan time: 8.960 The best scores are: opt bits E(32554) CCDS45430.1 SMG1 gene_id:23049|Hs108|chr16 (3661) 23886 4744.5 0 CCDS3124.1 ATR gene_id:545|Hs108|chr3 (2644) 485 108.1 9.4e-22 CCDS31669.1 ATM gene_id:472|Hs108|chr11 (3056) 466 104.3 1.4e-20 CCDS127.1 MTOR gene_id:2475|Hs108|chr1 (2549) 328 76.9 2.1e-12 >>CCDS45430.1 SMG1 gene_id:23049|Hs108|chr16 (3661 aa) initn: 23886 init1: 23886 opt: 23886 Z-score: 25559.0 bits: 4744.5 E(32554): 0 Smith-Waterman score: 23886; 100.0% identity (100.0% similar) in 3661 aa overlap (1-3661:1-3661) 10 20 30 40 50 60 pF1KB9 MSRRAPGSRLSSGGGGGGTKYPRSWNDWQPRTDSASADPDNLKYSSSRDRGGSSSYGLQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MSRRAPGSRLSSGGGGGGTKYPRSWNDWQPRTDSASADPDNLKYSSSRDRGGSSSYGLQP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 SNSAVVSRQRHDDTRVHADIQNDEKGGYSVNGGSGENTYGRKSLGQELRVNNVTSPEFTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 SNSAVVSRQRHDDTRVHADIQNDEKGGYSVNGGSGENTYGRKSLGQELRVNNVTSPEFTS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 VQHGSRALATKDMRKSQERSMSYSDESRLSNLLRRITREDDRDRRLATVKQLKEFIQQPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 VQHGSRALATKDMRKSQERSMSYSDESRLSNLLRRITREDDRDRRLATVKQLKEFIQQPE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB9 NKLVLVKQLDNILAAVHDVLNESSKLLQELRQEGACCLGLLCASLSYEAEKIFKWIFSKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 NKLVLVKQLDNILAAVHDVLNESSKLLQELRQEGACCLGLLCASLSYEAEKIFKWIFSKF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB9 SSSAKDEVKLLYLCATYKALETVGEKKAFSSVMQLVMTSLQSILENVDTPELLCKCVKCI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 SSSAKDEVKLLYLCATYKALETVGEKKAFSSVMQLVMTSLQSILENVDTPELLCKCVKCI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB9 LLVARCYPHIFSTNFRDTVDILVGWHIDHTQKPSLTQQVSGWLQSLEPFWVADLAFSTTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 LLVARCYPHIFSTNFRDTVDILVGWHIDHTQKPSLTQQVSGWLQSLEPFWVADLAFSTTL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB9 LGQFLEDMEAYAEDLSHVASGESVDEDVPPPSVSLPKLAALLRVFSTVVRSIGERFSPIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 LGQFLEDMEAYAEDLSHVASGESVDEDVPPPSVSLPKLAALLRVFSTVVRSIGERFSPIR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB9 GPPITEAYVTDVLYRVMRCVTAANQVFFSEAVLTAANECVGVLLGSLDPSMTIHCDMVIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 GPPITEAYVTDVLYRVMRCVTAANQVFFSEAVLTAANECVGVLLGSLDPSMTIHCDMVIT 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB9 YGLDQLENCQTCGTDYIISVLNLLTLIVEQINTKLPSSFVEKLFIPSSKLLFLRYHKEKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 YGLDQLENCQTCGTDYIISVLNLLTLIVEQINTKLPSSFVEKLFIPSSKLLFLRYHKEKE 490 500 510 520 530 540 550 560 570 580 590 600 pF1KB9 VVAVAHAVYQAVLSLKNIPVLETAYKLILGEMTCALNNLLHSLQLPEACSEIKHEAFKNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 VVAVAHAVYQAVLSLKNIPVLETAYKLILGEMTCALNNLLHSLQLPEACSEIKHEAFKNH 550 560 570 580 590 600 610 620 630 640 650 660 pF1KB9 VFNVDNAKFVVIFDLSALTTIGNAKNSLIGMWALSPTVFALLSKNLMIVHSDLAVHFPAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 VFNVDNAKFVVIFDLSALTTIGNAKNSLIGMWALSPTVFALLSKNLMIVHSDLAVHFPAI 610 620 630 640 650 660 670 680 690 700 710 720 pF1KB9 QYAVLYTLYSHCTRHDHFISSSLSSSSPSLFDGAVISTVTTATKKHFSIILNLLGILLKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 QYAVLYTLYSHCTRHDHFISSSLSSSSPSLFDGAVISTVTTATKKHFSIILNLLGILLKK 670 680 690 700 710 720 730 740 750 760 770 780 pF1KB9 DNLNQDTRKLLMTWALEAAVLMKKSETYAPLFSLPSFHKFCKGLLANTLVEDVNICLQAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 DNLNQDTRKLLMTWALEAAVLMKKSETYAPLFSLPSFHKFCKGLLANTLVEDVNICLQAC 730 740 750 760 770 780 790 800 810 820 830 840 pF1KB9 SSLHALSSSLPDDLLQRCVDVCRVQLVHSGTRIRQAFGKLLKSIPLDVVLSNNNHTEIQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 SSLHALSSSLPDDLLQRCVDVCRVQLVHSGTRIRQAFGKLLKSIPLDVVLSNNNHTEIQE 790 800 810 820 830 840 850 860 870 880 890 900 pF1KB9 ISLALRSHMSKAPSNTFHPQDFSDVISFILYGNSHRTGKDNWLERLFYSCQRLDKRDQST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 ISLALRSHMSKAPSNTFHPQDFSDVISFILYGNSHRTGKDNWLERLFYSCQRLDKRDQST 850 860 870 880 890 900 910 920 930 940 950 960 pF1KB9 IPRNLLKTDAVLWQWAIWEAAQFTVLSKLRTPLGRAQDTFQTIEGIIRSLAAHTLNPDQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 IPRNLLKTDAVLWQWAIWEAAQFTVLSKLRTPLGRAQDTFQTIEGIIRSLAAHTLNPDQD 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KB9 VSQWTTADNDEGHGNNQLRLVLLLQYLENLEKLMYNAYEGCANALTSPPKVIRTFFYTNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 VSQWTTADNDEGHGNNQLRLVLLLQYLENLEKLMYNAYEGCANALTSPPKVIRTFFYTNR 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KB9 QTCQDWLTRIRLSIMRVGLLAGQPAVTVRHGFDLLTEMKTTSLSQGNELEVTIMMVVEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 QTCQDWLTRIRLSIMRVGLLAGQPAVTVRHGFDLLTEMKTTSLSQGNELEVTIMMVVEAL 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KB9 CELHCPEAIQGIAVWSSSIVGKNLLWINSVAQQAEGRFEKASVEYQEHLCAMTGVDCCIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 CELHCPEAIQGIAVWSSSIVGKNLLWINSVAQQAEGRFEKASVEYQEHLCAMTGVDCCIS 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 pF1KB9 SFDKSVLTLANAGRNSASPKHSLNGESRKTVLSKPTDSSPEVINYLGNKACECYISIADW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 SFDKSVLTLANAGRNSASPKHSLNGESRKTVLSKPTDSSPEVINYLGNKACECYISIADW 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 pF1KB9 AAVQEWQNAIHDLKKSTSSTSLNLKADFNYIKSLSSFESGKFVECTEQLELLPGENINLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 AAVQEWQNAIHDLKKSTSSTSLNLKADFNYIKSLSSFESGKFVECTEQLELLPGENINLL 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 pF1KB9 AGGSKEKIDMKKLLPNMLSPDPRELQKSIEVQLLRSSVCLATALNPIEQDQKWQSITENV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 AGGSKEKIDMKKLLPNMLSPDPRELQKSIEVQLLRSSVCLATALNPIEQDQKWQSITENV 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 pF1KB9 VKYLKQTSRIAIGPLRLSTLTVSQSLPVLSTLQLYCSSALENTVSNRLSTEDCLIPLFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 VKYLKQTSRIAIGPLRLSTLTVSQSLPVLSTLQLYCSSALENTVSNRLSTEDCLIPLFSE 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 pF1KB9 ALRSCKQHDVRPWMQALRYTMYQNQLLEKIKEQTVPIRSHLMELGLTAAKFARKRGNVSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 ALRSCKQHDVRPWMQALRYTMYQNQLLEKIKEQTVPIRSHLMELGLTAAKFARKRGNVSL 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 pF1KB9 ATRLLAQCSEVQLGKTTTAQDLVQHFKKLSTQGQVDEKWGPELDIEKTKLLYTAGQSTHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 ATRLLAQCSEVQLGKTTTAQDLVQHFKKLSTQGQVDEKWGPELDIEKTKLLYTAGQSTHA 1450 1460 1470 1480 1490 1500 1510 1520 1530 1540 1550 1560 pF1KB9 MEMLSSCAISFCKSVKAEYAVAKSILTLAKWIQAEWKEISGQLKQVYRAQHQQNFTGLST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MEMLSSCAISFCKSVKAEYAVAKSILTLAKWIQAEWKEISGQLKQVYRAQHQQNFTGLST 1510 1520 1530 1540 1550 1560 1570 1580 1590 1600 1610 1620 pF1KB9 LSKNILTLIELPSVNTMEEEYPRIESESTVHIGVGEPDFILGQLYHLSSVQAPEVAKSWA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 LSKNILTLIELPSVNTMEEEYPRIESESTVHIGVGEPDFILGQLYHLSSVQAPEVAKSWA 1570 1580 1590 1600 1610 1620 1630 1640 1650 1660 1670 1680 pF1KB9 ALASWAYRWGRKVVDNASQGEGVRLLPREKSEVQNLLPDTITEEEKERIYGILGQAVCRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 ALASWAYRWGRKVVDNASQGEGVRLLPREKSEVQNLLPDTITEEEKERIYGILGQAVCRP 1630 1640 1650 1660 1670 1680 1690 1700 1710 1720 1730 1740 pF1KB9 AGIQDEDITLQITESEDNEEDDMVDVIWRQLISSCPWLSELDESATEGVIKVWRKVVDRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 AGIQDEDITLQITESEDNEEDDMVDVIWRQLISSCPWLSELDESATEGVIKVWRKVVDRI 1690 1700 1710 1720 1730 1740 1750 1760 1770 1780 1790 1800 pF1KB9 FSLYKLSCSAYFTFLKLNAGQIPLDEDDPRLHLSHRVEQSTDDMIVMATLRLLRLLVKHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 FSLYKLSCSAYFTFLKLNAGQIPLDEDDPRLHLSHRVEQSTDDMIVMATLRLLRLLVKHA 1750 1760 1770 1780 1790 1800 1810 1820 1830 1840 1850 1860 pF1KB9 GELRQYLEHGLETTPTAPWRGIIPQLFSRLNHPEVYVRQSICNLLCRVAQDSPHLILYPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 GELRQYLEHGLETTPTAPWRGIIPQLFSRLNHPEVYVRQSICNLLCRVAQDSPHLILYPA 1810 1820 1830 1840 1850 1860 1870 1880 1890 1900 1910 1920 pF1KB9 IVGTISLSSESQASGNKFSTAIPTLLGNIQGEELLVSECEGGSPPASQDSNKDEPKSGLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 IVGTISLSSESQASGNKFSTAIPTLLGNIQGEELLVSECEGGSPPASQDSNKDEPKSGLN 1870 1880 1890 1900 1910 1920 1930 1940 1950 1960 1970 1980 pF1KB9 EDQAMMQDCYSKIVDKLSSANPTMVLQVQMLVAELRRVTVLWDELWLGVLLQQHMYVLRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 EDQAMMQDCYSKIVDKLSSANPTMVLQVQMLVAELRRVTVLWDELWLGVLLQQHMYVLRR 1930 1940 1950 1960 1970 1980 1990 2000 2010 2020 2030 2040 pF1KB9 IQQLEDEVKRVQNNNTLRKEEKIAIMREKHTALMKPIVFALEHVRSITAAPAETPHEKWF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 IQQLEDEVKRVQNNNTLRKEEKIAIMREKHTALMKPIVFALEHVRSITAAPAETPHEKWF 1990 2000 2010 2020 2030 2040 2050 2060 2070 2080 2090 2100 pF1KB9 QDNYGDAIENALEKLKTPLNPAKPGSSWIPFKEIMLSLQQRAQKRASYILRLEEISPWLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 QDNYGDAIENALEKLKTPLNPAKPGSSWIPFKEIMLSLQQRAQKRASYILRLEEISPWLA 2050 2060 2070 2080 2090 2100 2110 2120 2130 2140 2150 2160 pF1KB9 AMTNTEIALPGEVSARDTVTIHSVGGTITILPTKTKPKKLLFLGSDGKSYPYLFKGLEDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 AMTNTEIALPGEVSARDTVTIHSVGGTITILPTKTKPKKLLFLGSDGKSYPYLFKGLEDL 2110 2120 2130 2140 2150 2160 2170 2180 2190 2200 2210 2220 pF1KB9 HLDERIMQFLSIVNTMFATINRQETPRFHARHYSVTPLGTRSGLIQWVDGATPLFGLYKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 HLDERIMQFLSIVNTMFATINRQETPRFHARHYSVTPLGTRSGLIQWVDGATPLFGLYKR 2170 2180 2190 2200 2210 2220 2230 2240 2250 2260 2270 2280 pF1KB9 WQQREAALQAQKAQDSYQTPQNPGIVPRPSELYYSKIGPALKTVGLSLDVSRRDWPLHVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 WQQREAALQAQKAQDSYQTPQNPGIVPRPSELYYSKIGPALKTVGLSLDVSRRDWPLHVM 2230 2240 2250 2260 2270 2280 2290 2300 2310 2320 2330 2340 pF1KB9 KAVLEELMEATPPNLLAKELWSSCTTPDEWWRVTQSYARSTAVMSMVGYIIGLGDRHLDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 KAVLEELMEATPPNLLAKELWSSCTTPDEWWRVTQSYARSTAVMSMVGYIIGLGDRHLDN 2290 2300 2310 2320 2330 2340 2350 2360 2370 2380 2390 2400 pF1KB9 VLIDMTTGEVVHIDYNVCFEKGKSLRVPEKVPFRMTQNIETALGVTGVEGVFRLSCEQVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 VLIDMTTGEVVHIDYNVCFEKGKSLRVPEKVPFRMTQNIETALGVTGVEGVFRLSCEQVL 2350 2360 2370 2380 2390 2400 2410 2420 2430 2440 2450 2460 pF1KB9 HIMRRGRETLLTLLEAFVYDPLVDWTAGGEAGFAGAVYGGGGQQAESKQSKREMEREITR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 HIMRRGRETLLTLLEAFVYDPLVDWTAGGEAGFAGAVYGGGGQQAESKQSKREMEREITR 2410 2420 2430 2440 2450 2460 2470 2480 2490 2500 2510 2520 pF1KB9 SLFSSRVAEIKVNWFKNRDEMLVVLPKLDGSLDEYLSLQEQLTDVEKLQGKLLEEIEFLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 SLFSSRVAEIKVNWFKNRDEMLVVLPKLDGSLDEYLSLQEQLTDVEKLQGKLLEEIEFLE 2470 2480 2490 2500 2510 2520 2530 2540 2550 2560 2570 2580 pF1KB9 GAEGVDHPSHTLQHRYSEHTQLQTQQRAVQEAIQVKLNEFEQWITHYQAAFNNLEATQLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 GAEGVDHPSHTLQHRYSEHTQLQTQQRAVQEAIQVKLNEFEQWITHYQAAFNNLEATQLA 2530 2540 2550 2560 2570 2580 2590 2600 2610 2620 2630 2640 pF1KB9 SLLQEISTQMDLGPPSYVPATAFLQNAGQAHLISQCEQLEGEVGALLQQRRSVLRGCLEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 SLLQEISTQMDLGPPSYVPATAFLQNAGQAHLISQCEQLEGEVGALLQQRRSVLRGCLEQ 2590 2600 2610 2620 2630 2640 2650 2660 2670 2680 2690 2700 pF1KB9 LHHYATVALQYPKAIFQKHRIEQWKTWMEELICNTTVERCQELYRKYEMQYAPQPPPTVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 LHHYATVALQYPKAIFQKHRIEQWKTWMEELICNTTVERCQELYRKYEMQYAPQPPPTVC 2650 2660 2670 2680 2690 2700 2710 2720 2730 2740 2750 2760 pF1KB9 QFITATEMTLQRYAADINSRLIRQVERLKQEAVTVPVCEDQLKEIERCIKVFLHENGEEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 QFITATEMTLQRYAADINSRLIRQVERLKQEAVTVPVCEDQLKEIERCIKVFLHENGEEG 2710 2720 2730 2740 2750 2760 2770 2780 2790 2800 2810 2820 pF1KB9 SLSLASVIISALCTLTRRNLMMEGAASSAGEQLVDLTSRDGAWFLEELCSMSGNVTCLVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 SLSLASVIISALCTLTRRNLMMEGAASSAGEQLVDLTSRDGAWFLEELCSMSGNVTCLVQ 2770 2780 2790 2800 2810 2820 2830 2840 2850 2860 2870 2880 pF1KB9 LLKQCHLVPQDLDIPNPMEASETVHLANGVYTSLQELNSNFRQIIFPEALRCLMKGEYTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 LLKQCHLVPQDLDIPNPMEASETVHLANGVYTSLQELNSNFRQIIFPEALRCLMKGEYTL 2830 2840 2850 2860 2870 2880 2890 2900 2910 2920 2930 2940 pF1KB9 ESMLHELDGLIEQTTDGVPLQTLVESLQAYLRNAAMGLEEETHAHYIDVARLLHAQYGEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 ESMLHELDGLIEQTTDGVPLQTLVESLQAYLRNAAMGLEEETHAHYIDVARLLHAQYGEL 2890 2900 2910 2920 2930 2940 2950 2960 2970 2980 2990 3000 pF1KB9 IQPRNGSVDETPKMSAGQMLLVAFDGMFAQVETAFSLLVEKLNKMEIPIAWRKIDIIREA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 IQPRNGSVDETPKMSAGQMLLVAFDGMFAQVETAFSLLVEKLNKMEIPIAWRKIDIIREA 2950 2960 2970 2980 2990 3000 3010 3020 3030 3040 3050 3060 pF1KB9 RSTQVNFFDDDNHRQVLEEIFFLKRLQTIKEFFRLCGTFSKTLSGSSSLEDQNTVNGPVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 RSTQVNFFDDDNHRQVLEEIFFLKRLQTIKEFFRLCGTFSKTLSGSSSLEDQNTVNGPVQ 3010 3020 3030 3040 3050 3060 3070 3080 3090 3100 3110 3120 pF1KB9 IVNVKTLFRNSCFSEDQMAKPIKAFTADFVRQLLIGLPNQALGLTLCSFISALGVDIIAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 IVNVKTLFRNSCFSEDQMAKPIKAFTADFVRQLLIGLPNQALGLTLCSFISALGVDIIAQ 3070 3080 3090 3100 3110 3120 3130 3140 3150 3160 3170 3180 pF1KB9 VEAKDFGAESKVSVDDLCKKAVEHNIQIGKFSQLVMNRATVLASSYDTAWKKHDLVRRLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 VEAKDFGAESKVSVDDLCKKAVEHNIQIGKFSQLVMNRATVLASSYDTAWKKHDLVRRLE 3130 3140 3150 3160 3170 3180 3190 3200 3210 3220 3230 3240 pF1KB9 TSISSCKTSLQRVQLHIAMFQWQHEDLLINRPQAMSVTPPPRSAILTSMKKKLHTLSQIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 TSISSCKTSLQRVQLHIAMFQWQHEDLLINRPQAMSVTPPPRSAILTSMKKKLHTLSQIE 3190 3200 3210 3220 3230 3240 3250 3260 3270 3280 3290 3300 pF1KB9 TSIATVQEKLAALESSIEQRLKWAGGANPALAPVLQDFEATIAERRNLVLKESQRASQVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 TSIATVQEKLAALESSIEQRLKWAGGANPALAPVLQDFEATIAERRNLVLKESQRASQVT 3250 3260 3270 3280 3290 3300 3310 3320 3330 3340 3350 3360 pF1KB9 FLCSNIIHFESLRTRTAEALNLDAALFELIKRCQQMCSFASQFNSSVSELELRLLQRVDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 FLCSNIIHFESLRTRTAEALNLDAALFELIKRCQQMCSFASQFNSSVSELELRLLQRVDT 3310 3320 3330 3340 3350 3360 3370 3380 3390 3400 3410 3420 pF1KB9 GLEHPIGSSEWLLSAHKQLTQDMSTQRAIQTEKEQQIETVCETIQNLVDNIKTVLTGHNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 GLEHPIGSSEWLLSAHKQLTQDMSTQRAIQTEKEQQIETVCETIQNLVDNIKTVLTGHNR 3370 3380 3390 3400 3410 3420 3430 3440 3450 3460 3470 3480 pF1KB9 QLGDVKHLLKAMAKDEEAALADGEDVPYENSVRQFLGEYKSWQDNIQTVLFTLVQAMGQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 QLGDVKHLLKAMAKDEEAALADGEDVPYENSVRQFLGEYKSWQDNIQTVLFTLVQAMGQV 3430 3440 3450 3460 3470 3480 3490 3500 3510 3520 3530 3540 pF1KB9 RSQEHVEMLQEITPTLKELKTQSQSIYNNLVSFASPLVTDATNECSSPTSSATYQPSFAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 RSQEHVEMLQEITPTLKELKTQSQSIYNNLVSFASPLVTDATNECSSPTSSATYQPSFAA 3490 3500 3510 3520 3530 3540 3550 3560 3570 3580 3590 3600 pF1KB9 AVRSNTGQKTQPDVMSQNARKLIQKNLATSADTPPSTVPGTGKSVACSPKKAVRDPKTGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 AVRSNTGQKTQPDVMSQNARKLIQKNLATSADTPPSTVPGTGKSVACSPKKAVRDPKTGK 3550 3560 3570 3580 3590 3600 3610 3620 3630 3640 3650 3660 pF1KB9 AVQERNSYAVSVWKRVKAKLEGRDVDPNRRMSVAEQVDYVIKEATNLDNLAQLYEGWTAW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 AVQERNSYAVSVWKRVKAKLEGRDVDPNRRMSVAEQVDYVIKEATNLDNLAQLYEGWTAW 3610 3620 3630 3640 3650 3660 pF1KB9 V : CCDS45 V >>CCDS3124.1 ATR gene_id:545|Hs108|chr3 (2644 aa) initn: 666 init1: 442 opt: 485 Z-score: 504.1 bits: 108.1 E(32554): 9.4e-22 Smith-Waterman score: 624; 36.8% identity (63.5% similar) in 299 aa overlap (2128-2426:2300-2566) 2100 2110 2120 2130 2140 2150 pF1KB9 WLAAMTNTEIALPGEVSARDTVTIHSVGGTITILPTKTKPKKLLFLGSDGKSYPYLFKGL . :: . ::::. . ::::: : .. : CCDS31 LPSILGTHANHASHEPFPGHWAYIAGFDDMVEILASLQKPKKISLKGSDGKFYIMMCKPK 2270 2280 2290 2300 2310 2320 2160 2170 2180 2190 2200 2210 pF1KB9 EDLHLDERIMQFLSIVNTMFATINRQETPRFHARHYSVTPLGTRSGLIQWVDGATPLFGL .::. : :.:.: :..: . ... ..: : :.: ::. . :.:.::.... : CCDS31 DDLRKDCRLMEFNSLINKCLRKDAESRRRELHIRTYAVIPLNDECGIIEWVNNTAGL--- 2330 2340 2350 2360 2370 2380 2220 2230 2240 2250 2260 2270 pF1KB9 YKRWQQREAALQAQKAQDSYQTPQNPGIVPRPSELYYSKIGPALKTVGLSLDVSRRDWPL : . : . :.: . :: . : :...:: CCDS31 ------RPILTKLYKEKGVYMTGK---------ELRQCML-P--KSAALS---------- 2390 2400 2410 2280 2290 2300 2310 2320 2330 pF1KB9 HVMKAVLEELMEATPPNLLAKELWSSCTTPDEWWRVTQSYARSTAVMSMVGYIIGLGDRH . .:. : :. :: .. . . . : :. ..: ::::::::::::.:::::: CCDS31 EKLKVFREFLLPRHPP-IFHEWFLRTFPDPTSWYSSRSAYCRSTAVMSMVGYILGLGDRH 2420 2430 2440 2450 2460 2470 2340 2350 2360 2370 2380 2390 pF1KB9 LDNVLIDMTTGEVVHIDYNVCFEKGKSLRVPEKVPFRMTQNIETALGVTGVEGVFRLSCE .:.:.: ::: ::.:.: :.::....::: ::::.:.:. ...: :.::.:: .:: CCDS31 GENILFDSLTGECVHVDFNCLFNKGETFEVPEIVPFRLTHNMVNGMGPMGTEGLFRRACE 2480 2490 2500 2510 2520 2530 2400 2410 2420 2430 2440 2450 pF1KB9 QVLHIMRRGRETLLTLLEAFVYDPLVDWTAGGEAGFAGAVYGGGGQQAESKQSKREMERE ....:: :: :...:..:..::::.:. CCDS31 VTMRLMRDQREPLMSVLKTFLHDPLVEWSKPVKGHSKAPLNETGEVVNEKAKTHVLDIEQ 2540 2550 2560 2570 2580 2590 >>CCDS31669.1 ATM gene_id:472|Hs108|chr11 (3056 aa) initn: 701 init1: 452 opt: 466 Z-score: 482.7 bits: 104.3 E(32554): 1.4e-20 Smith-Waterman score: 575; 32.6% identity (60.5% similar) in 347 aa overlap (2089-2426:2653-2961) 2060 2070 2080 2090 2100 2110 pF1KB9 LNPAKPGSSWIPFKEIMLSLQQRAQKRASYILRLEEISPWLAAMTNTEIALPGEVSARDT : .:... .. . .. :: . . CCDS31 LCDAYIILANLDATQWKTQRKGINIPADQPITKLKNLEDVVVPTMEIKVDHTGEYG--NL 2630 2640 2650 2660 2670 2680 2120 2130 2140 2150 2160 2170 pF1KB9 VTIHSVGGTITILPTKTKPKKLLFLGSDGKSYPYLFKGLEDLHLDERIMQFLSIVNTMFA :::.: . . . . :: . .::::: : :: .::. : ..: ... ::.. CCDS31 VTIQSFKAEFRLAGGVNLPKIIDCVGSDGKERRQLVKGRDDLRQDAVMQQVFQMCNTLLQ 2690 2700 2710 2720 2730 2740 2180 2190 2200 2210 2220 pF1KB9 TINRQETPRFHARHYSVTPLGTRSGLIQWVDGATPL--F------GLYKRWQQRE-AALQ .. . .. :.:.::. :::...: :..:. : : .::.. . .:.: CCDS31 RNTETRKRKLTICTYKVVPLSQRSGVLEWCTGTVPIGEFLVNNEDGAHKRYRPNDFSAFQ 2750 2760 2770 2780 2790 2800 2230 2240 2250 2260 2270 2280 pF1KB9 AQKAQDSYQTPQNPGIVPRPSELYYSKIGPALKTVGLSLDVSRRDWPLHVMKAVLEELME :: . : . . :.. .:: . :. . .:.... CCDS31 CQKKMMEVQKKS----FEEKYEVF--------------MDVCQNFQPVFRY-FCMEKFLD 2810 2820 2830 2840 2290 2300 2310 2320 2330 2340 pF1KB9 ATPPNLLAKELWSSCTTPDEWWRVTQSYARSTAVMSMVGYIIGLGDRHLDNVLIDMTTGE : :.. .:.::.:. :.::::.::::::..:.::. ..: CCDS31 -----------------PAIWFEKRLAYTRSVATSSIVGYILGLGDRHVQNILINEQSAE 2850 2860 2870 2880 2350 2360 2370 2380 2390 2400 pF1KB9 VVHIDYNVCFEKGKSLRVPEKVPFRMTQNIETALGVTGVEGVFRLSCEQVLHIMRRGRET .:::: .: ::.:: : .:: ::::.:..: ..:.:::::::: ::.....:: ..:: CCDS31 LVHIDLGVAFEQGKILPTPETVPFRLTRDIVDGMGITGVEGVFRRCCEKTMEVMRNSQET 2890 2900 2910 2920 2930 2940 2410 2420 2430 2440 2450 2460 pF1KB9 LLTLLEAFVYDPLVDWTAGGEAGFAGAVYGGGGQQAESKQSKREMEREITRSLFSSRVAE :::..:...:::: ::: CCDS31 LLTIVEVLLYDPLFDWTMNPLKALYLQQRPEDETELHPTLNADDQECKRNLSDIDQSFNK 2950 2960 2970 2980 2990 3000 >>CCDS127.1 MTOR gene_id:2475|Hs108|chr1 (2549 aa) initn: 1049 init1: 251 opt: 328 Z-score: 336.2 bits: 76.9 E(32554): 2.1e-12 Smith-Waterman score: 772; 27.1% identity (54.4% similar) in 641 aa overlap (1789-2425:1903-2429) 1760 1770 1780 1790 1800 1810 pF1KB9 AGQIPLDEDDPRLHLSHRVEQSTDDMIVMATLRLLRLLVK--HAGELRQYLEHGLETTPT :::.: : : .. . : .:... CCDS12 LSKTLLMYTVPAVQGFFRSISLSRGNNLQDTLRVLTLWFDYGHWPDVNEALVEGVKAIQI 1880 1890 1900 1910 1920 1930 1820 1830 1840 1850 1860 1870 pF1KB9 APWRGIIPQLFSRLNHPEVYVRQSICNLLCRVAQDSPHLILYPAIVGTISLSSESQASGN : .::::..:.. :. : . : .:: ... :. ..:: :.. : .. . ..: CCDS12 DTWLQVIPQLIARIDTPRPLVGRLIHQLLTDIGRYHPQALIYPLTVASKSTTTARHNAAN 1940 1950 1960 1970 1980 1990 1880 1890 1900 1910 1920 1930 pF1KB9 KFSTAIPTLLGNIQGEELLVSECEGGSPPASQDSNKDEPKSGLNEDQAMMQDCYSKIVDK : .: :. :: :: CCDS12 K-------ILKNM---------CE--------HSN------------------------- 2000 1940 1950 1960 1970 1980 1990 pF1KB9 LSSANPTMVLQVQMLVAELRRVTVLWDELWLGVLLQQHMYVLRRIQQLEDEVKRVQNNNT :.: :..:. :: ::..:: :.: .. . :. : .:: . CCDS12 ------TLVQQAMMVSEELIRVAILWHEMW-----HEGLEEASRLYFGERNVK-----GM 2010 2020 2030 2040 2000 2010 2020 2030 2040 2050 pF1KB9 LRKEEKIAIMREKHTALMKPIVFALEHVRSITAAPAETPHEKWFQDNYGDAIENALEKLK .. : . : :. .: : . :.. : ..: . . .: CCDS12 FEVLEPLHAMMERGPQTLKETSFNQAYGRDLMEA------QEWCR-----------KYMK 2050 2060 2070 2080 2090 2060 2070 2080 2090 2100 2110 pF1KB9 TPLNPAKPGSSWIPFKEIMLSLQQRAQKRASYILRLEEISPWLAAMTNTEIALPGEVSA- . : ..: . ... .... . .: :.:. .:: : . :.:.:: . CCDS12 SG-NVKDLTQAWDLYYHVFRRISKQLPQLTS--LELQYVSPKLLMCRDLELAVPGTYDPN 2100 2110 2120 2130 2140 2120 2130 2140 2150 2160 2170 pF1KB9 RDTVTIHSVGGTITILPTKTKPKKLLFLGSDGKSYPYLFKGLEDLHLDERIMQFLSIVNT . . :.:.. .. .. .: .:.:: ..::.:. . .:.:: :::. :::.::....::: CCDS12 QPIIRIQSIAPSLQVITSKQRPRKLTLMGSNGHEFVFLLKGHEDLRQDERVMQLFGLVNT 2150 2160 2170 2180 2190 2200 2180 2190 2200 2210 2220 2230 pF1KB9 MFATINRQETPRFHARHYSVTPLGTRSGLIQWVDGATPLFGLYKRWQQREAALQAQKAQD ..:. . . ..:.: ::.: :::: :: : .: . ..... : CCDS12 LLANDPTSLRKNLSIQRYAVIPLSTNSGLIGWVPHCDTLHALIRDYREKKKILL------ 2210 2220 2230 2240 2250 2260 2240 2250 2260 2270 2280 2290 pF1KB9 SYQTPQNPGIVPRPSELYYSKIGPALKTVGLSLDVSRRDWPLHVMKAVLEELMEATPPNL .: : . ...: . : : :.:. .. : . CCDS12 --------NIEHR----IMLRMAPDYDHLTLMQKVE-----------VFEHAVNNTAGDD 2270 2280 2290 2300 2310 2320 2330 2340 2350 pF1KB9 LAKELWSSCTTPDEWWRVTQSYARSTAVMSMVGYIIGLGDRHLDNVLIDMTTGEVVHIDY ::: :: . . . :. .:.:: :::::::::.:::::: .:...: .:...:::. CCDS12 LAKLLWLKSPSSEVWFDRRTNYTRSLAVMSMVGYILGLGDRHPSNLMLDRLSGKILHIDF 2300 2310 2320 2330 2340 2350 2360 2370 2380 2390 2400 2410 pF1KB9 NVCFEKGKSL-RVPEKVPFRMTQNIETALGVTGVEGVFRLSCEQVLHIMRRGRETLLTLL . ::: . . . :::.:::.:. . .:. :::..: .:..:. :....:. .......: CCDS12 GDCFEVAMTREKFPEKIPFRLTRMLTNAMEVTGLDGNYRITCHTVMEVLREHKDSVMAVL 2360 2370 2380 2390 2400 2410 2420 2430 2440 2450 2460 2470 pF1KB9 EAFVYDPLVDWTAGGEAGFAGAVYGGGGQQAESKQSKREMEREITRSLFSSRVAEIKVNW ::::::::..: CCDS12 EAFVYDPLLNWRLMDTNTKGNKRSRTRTDSYSAGQSVEILDGVELGEPAHKKTGTTVPES 2420 2430 2440 2450 2460 2470 3661 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 19:49:03 2016 done: Sun Nov 6 19:49:04 2016 Total Scan time: 8.960 Total Display time: 0.850 Function used was FASTA [36.3.4 Apr, 2011]