FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2366, 466 aa 1>>>pF1KE2366 466 - 466 aa - 466 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.4694+/-0.000984; mu= 12.2471+/- 0.059 mean_var=101.8556+/-21.192, 0's: 0 Z-trim(106.6): 88 B-trim: 67 in 1/51 Lambda= 0.127081 statistics sampled from 8968 (9060) to 8968 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.65), E-opt: 0.2 (0.278), width: 16 Scan time: 2.910 The best scores are: opt bits E(32554) CCDS76463.1 EED gene_id:8726|Hs108|chr11 ( 466) 3253 607.3 1.1e-173 CCDS8273.1 EED gene_id:8726|Hs108|chr11 ( 441) 2224 418.6 6.5e-117 CCDS81612.1 EED gene_id:8726|Hs108|chr11 ( 361) 1655 314.2 1.4e-85 >>CCDS76463.1 EED gene_id:8726|Hs108|chr11 (466 aa) initn: 3253 init1: 3253 opt: 3253 Z-score: 3231.7 bits: 607.3 E(32554): 1.1e-173 Smith-Waterman score: 3253; 100.0% identity (100.0% similar) in 466 aa overlap (1-466:1-466) 10 20 30 40 50 60 pF1KE2 MSEREVSTAPAGTDMPAAKKQKLSSDENSNPDLSGDENDDAVSIESGTNTERPDTPTNTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MSEREVSTAPAGTDMPAAKKQKLSSDENSNPDLSGDENDDAVSIESGTNTERPDTPTNTP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NAPGRKSWGKGKWKSKKCKYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 NAPGRKSWGKGKWKSKKCKYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 VTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 VTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 SADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 SADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 TRDIHRNYVDCVRWLGDLILSKSGRAILHSHQQCMRDPVSPNLRQHLSCENAIVCWKPGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 TRDIHRNYVDCVRWLGDLILSKSGRAILHSHQQCMRDPVSPNLRQHLSCENAIVCWKPGK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 MEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED 370 380 390 400 410 420 430 440 450 460 pF1KE2 PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR :::::::::::::::::::::::::::::::::::::::::::::: CCDS76 PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 430 440 450 460 >>CCDS8273.1 EED gene_id:8726|Hs108|chr11 (441 aa) initn: 2223 init1: 2223 opt: 2224 Z-score: 2212.5 bits: 418.6 E(32554): 6.5e-117 Smith-Waterman score: 3013; 94.6% identity (94.6% similar) in 466 aa overlap (1-466:1-441) 10 20 30 40 50 60 pF1KE2 MSEREVSTAPAGTDMPAAKKQKLSSDENSNPDLSGDENDDAVSIESGTNTERPDTPTNTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 MSEREVSTAPAGTDMPAAKKQKLSSDENSNPDLSGDENDDAVSIESGTNTERPDTPTNTP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NAPGRKSWGKGKWKSKKCKYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 NAPGRKSWGKGKWKSKKCKYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 VTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 VTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 SADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 SADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 TRDIHRNYVDCVRWLGDLILSKSGRAILHSHQQCMRDPVSPNLRQHLSCENAIVCWKPGK ::::::::::::::::::::::: :::::::::::: CCDS82 TRDIHRNYVDCVRWLGDLILSKS-------------------------CENAIVCWKPGK 310 320 330 370 380 390 400 410 420 pF1KE2 MEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 MEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED 340 350 360 370 380 390 430 440 450 460 pF1KE2 PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR :::::::::::::::::::::::::::::::::::::::::::::: CCDS82 PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 400 410 420 430 440 >>CCDS81612.1 EED gene_id:8726|Hs108|chr11 (361 aa) initn: 2496 init1: 1655 opt: 1655 Z-score: 1649.9 bits: 314.2 E(32554): 1.4e-85 Smith-Waterman score: 2290; 77.5% identity (77.5% similar) in 466 aa overlap (1-466:1-361) 10 20 30 40 50 60 pF1KE2 MSEREVSTAPAGTDMPAAKKQKLSSDENSNPDLSGDENDDAVSIESGTNTERPDTPTNTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 MSEREVSTAPAGTDMPAAKKQKLSSDENSNPDLSGDENDDAVSIESGTNTERPDTPTNTP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NAPGRKSWGKGKWKSKKCKYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 NAPGRKSWGKGKWKSKKCKYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 VTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 VTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 SADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS :: CCDS81 SA---------------------------------------------------------- 310 320 330 340 350 360 pF1KE2 TRDIHRNYVDCVRWLGDLILSKSGRAILHSHQQCMRDPVSPNLRQHLSCENAIVCWKPGK ::::::::::::: CCDS81 -----------------------------------------------SCENAIVCWKPGK 250 370 380 390 400 410 420 pF1KE2 MEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 MEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED 260 270 280 290 300 310 430 440 450 460 pF1KE2 PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR :::::::::::::::::::::::::::::::::::::::::::::: CCDS81 PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 320 330 340 350 360 466 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 19:59:35 2016 done: Sun Nov 6 19:59:35 2016 Total Scan time: 2.910 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]