FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6152, 51 aa 1>>>pF1KE6152 51 - 51 aa - 51 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.2387+/-0.000268; mu= 9.7175+/- 0.017 mean_var=44.5585+/- 8.822, 0's: 0 Z-trim(118.9): 10 B-trim: 288 in 1/54 Lambda= 0.192136 statistics sampled from 32359 (32369) to 32359 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.79), E-opt: 0.2 (0.38), width: 16 Scan time: 2.580 The best scores are: opt bits E(85289) NP_000191 (OMIM: 142702) histatin-3 precursor [Hom ( 51) 353 104.1 1e-23 NP_002150 (OMIM: 142701) histatin-1 precursor [Hom ( 57) 285 85.3 5.2e-18 NP_001009181 (OMIM: 184470) statherin isoform b pr ( 52) 118 39.0 0.00042 NP_003145 (OMIM: 184470) statherin isoform a precu ( 62) 108 36.3 0.0033 >>NP_000191 (OMIM: 142702) histatin-3 precursor [Homo sa (51 aa) initn: 353 init1: 353 opt: 353 Z-score: 546.9 bits: 104.1 E(85289): 1e-23 Smith-Waterman score: 353; 100.0% identity (100.0% similar) in 51 aa overlap (1-51:1-51) 10 20 30 40 50 pF1KE6 MKFFVFALILALMLSMTGADSHAKRHHGYKRKFHEKHHSHRGYRSNYLYDN ::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MKFFVFALILALMLSMTGADSHAKRHHGYKRKFHEKHHSHRGYRSNYLYDN 10 20 30 40 50 >>NP_002150 (OMIM: 142701) histatin-1 precursor [Homo sa (57 aa) initn: 333 init1: 256 opt: 285 Z-score: 444.3 bits: 85.3 E(85289): 5.2e-18 Smith-Waterman score: 285; 75.4% identity (82.5% similar) in 57 aa overlap (1-51:1-57) 10 20 30 40 50 pF1KE6 MKFFVFALILALMLSMTGADSHAKRHHGYKRKFHEKHHSHR------GYRSNYLYDN ::::::::.::::.:: .:::: ::::::.::::::::::: : ::::::: NP_002 MKFFVFALVLALMISMISADSHEKRHHGYRRKFHEKHHSHREFPFYGDYGSNYLYDN 10 20 30 40 50 >>NP_001009181 (OMIM: 184470) statherin isoform b precur (52 aa) initn: 117 init1: 112 opt: 118 Z-score: 194.7 bits: 39.0 E(85289): 0.00042 Smith-Waterman score: 118; 44.7% identity (66.0% similar) in 47 aa overlap (1-47:1-47) 10 20 30 40 50 pF1KE6 MKFFVFALILALMLSMTGADSHAKRHHGYKRKFHEKHHSHRGYRSNYLYDN :::.:::.:::::.:: :::: . .: . :. . :. .: NP_001 MKFLVFAFILALMVSMIGADSSEEYGYGPYQPVPEQPLYPQPYQPQYQQYTF 10 20 30 40 50 >>NP_003145 (OMIM: 184470) statherin isoform a precursor (62 aa) initn: 112 init1: 108 opt: 108 Z-score: 178.6 bits: 36.3 E(85289): 0.0033 Smith-Waterman score: 108; 68.0% identity (88.0% similar) in 25 aa overlap (1-25:1-25) 10 20 30 40 50 pF1KE6 MKFFVFALILALMLSMTGADSHAKRHHGYKRKFHEKHHSHRGYRSNYLYDN :::.:::.:::::.:: :::: .. NP_003 MKFLVFAFILALMVSMIGADSSEEKFLRRIGRFGYGYGPYQPVPEQPLYPQPYQPQYQQY 10 20 30 40 50 60 51 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:54:24 2016 done: Tue Nov 8 09:54:25 2016 Total Scan time: 2.580 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]