FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6352, 370 aa 1>>>pF1KE6352 370 - 370 aa - 370 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3415+/-0.000425; mu= 15.2881+/- 0.026 mean_var=53.5397+/-10.877, 0's: 0 Z-trim(110.7): 13 B-trim: 226 in 1/48 Lambda= 0.175282 statistics sampled from 19117 (19122) to 19117 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.593), E-opt: 0.2 (0.224), width: 16 Scan time: 6.310 The best scores are: opt bits E(85289) NP_478059 (OMIM: 610936,610992,616038) phosphoseri ( 370) 2442 625.7 5.1e-179 NP_066977 (OMIM: 610936,610992,616038) phosphoseri ( 324) 1924 494.7 1.2e-139 >>NP_478059 (OMIM: 610936,610992,616038) phosphoserine a (370 aa) initn: 2442 init1: 2442 opt: 2442 Z-score: 3335.0 bits: 625.7 E(85289): 5.1e-179 Smith-Waterman score: 2442; 100.0% identity (100.0% similar) in 370 aa overlap (1-370:1-370) 10 20 30 40 50 60 pF1KE6 MDAPRQVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_478 MDAPRQVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 RELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_478 RELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 INIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGAVLVCDMSSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_478 INIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGAVLVCDMSSN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 FLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_478 FLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 NTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_478 NTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 MNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_478 MNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAF 310 320 330 340 350 360 370 pF1KE6 MKKFLEMHQL :::::::::: NP_478 MKKFLEMHQL 370 >>NP_066977 (OMIM: 610936,610992,616038) phosphoserine a (324 aa) initn: 2116 init1: 1920 opt: 1924 Z-score: 2628.0 bits: 494.7 E(85289): 1.2e-139 Smith-Waterman score: 2028; 87.6% identity (87.6% similar) in 370 aa overlap (1-370:1-324) 10 20 30 40 50 60 pF1KE6 MDAPRQVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_066 MDAPRQVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 RELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_066 RELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 INIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGAVLVCDMSSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_066 INIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGAVLVCDMSSN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 FLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_066 FLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 NTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSK :::::::::::::::::::::::::::::::::::::::::::::::::: NP_066 NTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYV---------- 250 260 270 280 290 310 320 330 340 350 360 pF1KE6 MNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAF :::::::::::::::::::::::: NP_066 ------------------------------------SVGGIRASLYNAVTIEDVQKLAAF 300 310 370 pF1KE6 MKKFLEMHQL :::::::::: NP_066 MKKFLEMHQL 320 370 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 12:23:19 2016 done: Tue Nov 8 12:23:20 2016 Total Scan time: 6.310 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]