FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6352, 370 aa 1>>>pF1KE6352 370 - 370 aa - 370 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1516+/-0.000916; mu= 16.5196+/- 0.055 mean_var=53.9978+/-11.049, 0's: 0 Z-trim(104.2): 11 B-trim: 54 in 1/48 Lambda= 0.174536 statistics sampled from 7792 (7795) to 7792 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.615), E-opt: 0.2 (0.239), width: 16 Scan time: 1.860 The best scores are: opt bits E(32554) CCDS6660.1 PSAT1 gene_id:29968|Hs108|chr9 ( 370) 2442 623.0 1.3e-178 CCDS6659.1 PSAT1 gene_id:29968|Hs108|chr9 ( 324) 1924 492.6 2e-139 >>CCDS6660.1 PSAT1 gene_id:29968|Hs108|chr9 (370 aa) initn: 2442 init1: 2442 opt: 2442 Z-score: 3320.4 bits: 623.0 E(32554): 1.3e-178 Smith-Waterman score: 2442; 100.0% identity (100.0% similar) in 370 aa overlap (1-370:1-370) 10 20 30 40 50 60 pF1KE6 MDAPRQVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 MDAPRQVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 RELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 RELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 INIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGAVLVCDMSSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 INIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGAVLVCDMSSN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 FLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 FLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 NTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 NTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 MNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 MNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAF 310 320 330 340 350 360 370 pF1KE6 MKKFLEMHQL :::::::::: CCDS66 MKKFLEMHQL 370 >>CCDS6659.1 PSAT1 gene_id:29968|Hs108|chr9 (324 aa) initn: 2116 init1: 1920 opt: 1924 Z-score: 2616.4 bits: 492.6 E(32554): 2e-139 Smith-Waterman score: 2028; 87.6% identity (87.6% similar) in 370 aa overlap (1-370:1-324) 10 20 30 40 50 60 pF1KE6 MDAPRQVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 MDAPRQVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 RELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 RELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 INIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGAVLVCDMSSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 INIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGAVLVCDMSSN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 FLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 FLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 NTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSK :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 NTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYV---------- 250 260 270 280 290 310 320 330 340 350 360 pF1KE6 MNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAF :::::::::::::::::::::::: CCDS66 ------------------------------------SVGGIRASLYNAVTIEDVQKLAAF 300 310 370 pF1KE6 MKKFLEMHQL :::::::::: CCDS66 MKKFLEMHQL 320 370 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 12:23:18 2016 done: Tue Nov 8 12:23:18 2016 Total Scan time: 1.860 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]