FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3627, 114 aa 1>>>pF1KE3627 114 - 114 aa - 114 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8355+/-0.000553; mu= 12.1680+/- 0.033 mean_var=50.9075+/-10.110, 0's: 0 Z-trim(111.3): 6 B-trim: 0 in 0/52 Lambda= 0.179756 statistics sampled from 12265 (12269) to 12265 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.777), E-opt: 0.2 (0.377), width: 16 Scan time: 1.620 The best scores are: opt bits E(32554) CCDS9941.1 TCL1A gene_id:8115|Hs108|chr14 ( 114) 800 214.3 1.3e-56 CCDS44027.1 MTCP1 gene_id:4515|Hs108|chrX ( 107) 291 82.3 6.8e-17 >>CCDS9941.1 TCL1A gene_id:8115|Hs108|chr14 (114 aa) initn: 800 init1: 800 opt: 800 Z-score: 1129.7 bits: 214.3 E(32554): 1.3e-56 Smith-Waterman score: 800; 100.0% identity (100.0% similar) in 114 aa overlap (1-114:1-114) 10 20 30 40 50 60 pF1KE3 MAECPTLGEAVTDHPDRLWAWEKFVYLDEKQHAWLPLTIEIKDRLQLRVLLRREDVVLGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 MAECPTLGEAVTDHPDRLWAWEKFVYLDEKQHAWLPLTIEIKDRLQLRVLLRREDVVLGR 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 PMTPTQIGPSLLPIMWQLYPDGRYRSSDSSFWRLVYHIKIDGVEDMLLELLPDD :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 PMTPTQIGPSLLPIMWQLYPDGRYRSSDSSFWRLVYHIKIDGVEDMLLELLPDD 70 80 90 100 110 >>CCDS44027.1 MTCP1 gene_id:4515|Hs108|chrX (107 aa) initn: 216 init1: 216 opt: 291 Z-score: 416.7 bits: 82.3 E(32554): 6.8e-17 Smith-Waterman score: 291; 40.2% identity (71.0% similar) in 107 aa overlap (8-114:3-107) 10 20 30 40 50 60 pF1KE3 MAECPTLGEAVTDHPDRLWAWEKFVYLDEKQHAWLPLTIEIKDRLQLRVLLRREDVVLGR :: : ::.::. .. .: :: :..:. .. : . :. :: .. .: :: CCDS44 MAGEDVGAPPDHLWVHQEGIYRDEYQRTWVAVVEEETSFLRARV--QQIQVPLGD 10 20 30 40 50 70 80 90 100 110 pF1KE3 PMTPTQIGPSLLPIMWQLYPDGRYRSSDSSFWRLVYHIKIDGVEDMLLELLPDD :... : ::.::::::. :: ...: .:.. .:. . ::...::.::::: CCDS44 AARPSHLLTSQLPLMWQLYPEERYMDNNSRLWQIQHHLMVRGVQELLLKLLPDD 60 70 80 90 100 114 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 20:13:53 2016 done: Sun Nov 6 20:13:53 2016 Total Scan time: 1.620 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]