FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2183, 597 aa 1>>>pF1KE2183 597 - 597 aa - 597 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.3561+/-0.00139; mu= -4.6526+/- 0.082 mean_var=256.8299+/-54.355, 0's: 0 Z-trim(106.7): 68 B-trim: 122 in 1/52 Lambda= 0.080030 statistics sampled from 9089 (9123) to 9089 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.624), E-opt: 0.2 (0.28), width: 16 Scan time: 3.500 The best scores are: opt bits E(32554) CCDS3102.1 CEP70 gene_id:80321|Hs108|chr3 ( 597) 3853 458.9 8.5e-129 CCDS75022.1 CEP70 gene_id:80321|Hs108|chr3 ( 579) 3725 444.1 2.3e-124 CCDS75023.1 CEP70 gene_id:80321|Hs108|chr3 ( 554) 3563 425.4 9.6e-119 CCDS75024.1 CEP70 gene_id:80321|Hs108|chr3 ( 445) 2862 344.4 1.9e-94 CCDS82842.1 CEP70 gene_id:80321|Hs108|chr3 ( 212) 1372 172.2 6.2e-43 >>CCDS3102.1 CEP70 gene_id:80321|Hs108|chr3 (597 aa) initn: 3853 init1: 3853 opt: 3853 Z-score: 2425.7 bits: 458.9 E(32554): 8.5e-129 Smith-Waterman score: 3853; 100.0% identity (100.0% similar) in 597 aa overlap (1-597:1-597) 10 20 30 40 50 60 pF1KE2 MFPVAPKPQDSSQPSDRLMTEKQQEEAEWESINVLLMMHGLKPLSLVKRTDLKDLIIFDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MFPVAPKPQDSSQPSDRLMTEKQQEEAEWESINVLLMMHGLKPLSLVKRTDLKDLIIFDK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 QSSQRMRQNLKLLVEETSCQQNMIQELIETNQQLRNELQLEQSRAANQEQRANDLEQIME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 QSSQRMRQNLKLLVEETSCQQNMIQELIETNQQLRNELQLEQSRAANQEQRANDLEQIME 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 SVKSKIGELEDESLSRACHQQNKIKDLQKEQKTLQVKCQHYKKKRTEQEETIASLQMEVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 SVKSKIGELEDESLSRACHQQNKIKDLQKEQKTLQVKCQHYKKKRTEQEETIASLQMEVC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 RLKKEEEDRIVTQNRVFAYLCKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 RLKKEEEDRIVTQNRVFAYLCKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 EEENDYRNLDASPTYKGLLMSLQNQLKESKSKIDALSSEKLNLQKDLETRPTQHELRLYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 EEENDYRNLDASPTYKGLLMSLQNQLKESKSKIDALSSEKLNLQKDLETRPTQHELRLYK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 QQVKKLEKALKKNVKLQELINHKKAEDTEKKDEPSKYNQQQALIDQRYFQVLCSINSIIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 QQVKKLEKALKKNVKLQELINHKKAEDTEKKDEPSKYNQQQALIDQRYFQVLCSINSIIH 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 NPRAPVIIYKQTKGGVQNFNKDLVQDCGFEHLVPVIEMWADQLTSLKDLYKSLKTLSAEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 NPRAPVIIYKQTKGGVQNFNKDLVQDCGFEHLVPVIEMWADQLTSLKDLYKSLKTLSAEL 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 VPWLNLKKQDENEGIKVEDLLFIVDTMLEEVENKEKDSNMPHFQTLQAIVSHFQKLFDVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 VPWLNLKKQDENEGIKVEDLLFIVDTMLEEVENKEKDSNMPHFQTLQAIVSHFQKLFDVP 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 SLNGVYPRMNEVYTRLGEMNNAVRNLQELLELDSSSSLCVLVSTVGKLCRLINEDVNEQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 SLNGVYPRMNEVYTRLGEMNNAVRNLQELLELDSSSSLCVLVSTVGKLCRLINEDVNEQV 490 500 510 520 530 540 550 560 570 580 590 pF1KE2 MQVLGPEDLQSIIYKLEEHEEFFPAFQAFTNDLLEILEIDDLDAIVPAVKKLKVLSY ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MQVLGPEDLQSIIYKLEEHEEFFPAFQAFTNDLLEILEIDDLDAIVPAVKKLKVLSY 550 560 570 580 590 >>CCDS75022.1 CEP70 gene_id:80321|Hs108|chr3 (579 aa) initn: 3725 init1: 3725 opt: 3725 Z-score: 2346.1 bits: 444.1 E(32554): 2.3e-124 Smith-Waterman score: 3725; 100.0% identity (100.0% similar) in 579 aa overlap (19-597:1-579) 10 20 30 40 50 60 pF1KE2 MFPVAPKPQDSSQPSDRLMTEKQQEEAEWESINVLLMMHGLKPLSLVKRTDLKDLIIFDK :::::::::::::::::::::::::::::::::::::::::: CCDS75 MTEKQQEEAEWESINVLLMMHGLKPLSLVKRTDLKDLIIFDK 10 20 30 40 70 80 90 100 110 120 pF1KE2 QSSQRMRQNLKLLVEETSCQQNMIQELIETNQQLRNELQLEQSRAANQEQRANDLEQIME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 QSSQRMRQNLKLLVEETSCQQNMIQELIETNQQLRNELQLEQSRAANQEQRANDLEQIME 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE2 SVKSKIGELEDESLSRACHQQNKIKDLQKEQKTLQVKCQHYKKKRTEQEETIASLQMEVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 SVKSKIGELEDESLSRACHQQNKIKDLQKEQKTLQVKCQHYKKKRTEQEETIASLQMEVC 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE2 RLKKEEEDRIVTQNRVFAYLCKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 RLKKEEEDRIVTQNRVFAYLCKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQS 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE2 EEENDYRNLDASPTYKGLLMSLQNQLKESKSKIDALSSEKLNLQKDLETRPTQHELRLYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 EEENDYRNLDASPTYKGLLMSLQNQLKESKSKIDALSSEKLNLQKDLETRPTQHELRLYK 230 240 250 260 270 280 310 320 330 340 350 360 pF1KE2 QQVKKLEKALKKNVKLQELINHKKAEDTEKKDEPSKYNQQQALIDQRYFQVLCSINSIIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 QQVKKLEKALKKNVKLQELINHKKAEDTEKKDEPSKYNQQQALIDQRYFQVLCSINSIIH 290 300 310 320 330 340 370 380 390 400 410 420 pF1KE2 NPRAPVIIYKQTKGGVQNFNKDLVQDCGFEHLVPVIEMWADQLTSLKDLYKSLKTLSAEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 NPRAPVIIYKQTKGGVQNFNKDLVQDCGFEHLVPVIEMWADQLTSLKDLYKSLKTLSAEL 350 360 370 380 390 400 430 440 450 460 470 480 pF1KE2 VPWLNLKKQDENEGIKVEDLLFIVDTMLEEVENKEKDSNMPHFQTLQAIVSHFQKLFDVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 VPWLNLKKQDENEGIKVEDLLFIVDTMLEEVENKEKDSNMPHFQTLQAIVSHFQKLFDVP 410 420 430 440 450 460 490 500 510 520 530 540 pF1KE2 SLNGVYPRMNEVYTRLGEMNNAVRNLQELLELDSSSSLCVLVSTVGKLCRLINEDVNEQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 SLNGVYPRMNEVYTRLGEMNNAVRNLQELLELDSSSSLCVLVSTVGKLCRLINEDVNEQV 470 480 490 500 510 520 550 560 570 580 590 pF1KE2 MQVLGPEDLQSIIYKLEEHEEFFPAFQAFTNDLLEILEIDDLDAIVPAVKKLKVLSY ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 MQVLGPEDLQSIIYKLEEHEEFFPAFQAFTNDLLEILEIDDLDAIVPAVKKLKVLSY 530 540 550 560 570 >>CCDS75023.1 CEP70 gene_id:80321|Hs108|chr3 (554 aa) initn: 3563 init1: 3563 opt: 3563 Z-score: 2245.3 bits: 425.4 E(32554): 9.6e-119 Smith-Waterman score: 3563; 99.3% identity (99.6% similar) in 554 aa overlap (1-554:1-554) 10 20 30 40 50 60 pF1KE2 MFPVAPKPQDSSQPSDRLMTEKQQEEAEWESINVLLMMHGLKPLSLVKRTDLKDLIIFDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 MFPVAPKPQDSSQPSDRLMTEKQQEEAEWESINVLLMMHGLKPLSLVKRTDLKDLIIFDK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 QSSQRMRQNLKLLVEETSCQQNMIQELIETNQQLRNELQLEQSRAANQEQRANDLEQIME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 QSSQRMRQNLKLLVEETSCQQNMIQELIETNQQLRNELQLEQSRAANQEQRANDLEQIME 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 SVKSKIGELEDESLSRACHQQNKIKDLQKEQKTLQVKCQHYKKKRTEQEETIASLQMEVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 SVKSKIGELEDESLSRACHQQNKIKDLQKEQKTLQVKCQHYKKKRTEQEETIASLQMEVC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 RLKKEEEDRIVTQNRVFAYLCKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 RLKKEEEDRIVTQNRVFAYLCKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 EEENDYRNLDASPTYKGLLMSLQNQLKESKSKIDALSSEKLNLQKDLETRPTQHELRLYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 EEENDYRNLDASPTYKGLLMSLQNQLKESKSKIDALSSEKLNLQKDLETRPTQHELRLYK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 QQVKKLEKALKKNVKLQELINHKKAEDTEKKDEPSKYNQQQALIDQRYFQVLCSINSIIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 QQVKKLEKALKKNVKLQELINHKKAEDTEKKDEPSKYNQQQALIDQRYFQVLCSINSIIH 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 NPRAPVIIYKQTKGGVQNFNKDLVQDCGFEHLVPVIEMWADQLTSLKDLYKSLKTLSAEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 NPRAPVIIYKQTKGGVQNFNKDLVQDCGFEHLVPVIEMWADQLTSLKDLYKSLKTLSAEL 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 VPWLNLKKQDENEGIKVEDLLFIVDTMLEEVENKEKDSNMPHFQTLQAIVSHFQKLFDVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 VPWLNLKKQDENEGIKVEDLLFIVDTMLEEVENKEKDSNMPHFQTLQAIVSHFQKLFDVP 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 SLNGVYPRMNEVYTRLGEMNNAVRNLQELLELDSSSSLCVLVSTVGKLCRLINEDVNEQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 SLNGVYPRMNEVYTRLGEMNNAVRNLQELLELDSSSSLCVLVSTVGKLCRLINEDVNEQV 490 500 510 520 530 540 550 560 570 580 590 pF1KE2 MQVLGPEDLQSIIYKLEEHEEFFPAFQAFTNDLLEILEIDDLDAIVPAVKKLKVLSY :::::::::: .. CCDS75 MQVLGPEDLQRYLF 550 >>CCDS75024.1 CEP70 gene_id:80321|Hs108|chr3 (445 aa) initn: 2862 init1: 2862 opt: 2862 Z-score: 1809.3 bits: 344.4 E(32554): 1.9e-94 Smith-Waterman score: 2862; 99.8% identity (100.0% similar) in 443 aa overlap (155-597:3-445) 130 140 150 160 170 180 pF1KE2 KIGELEDESLSRACHQQNKIKDLQKEQKTLQVKCQHYKKKRTEQEETIASLQMEVCRLKK .::::::::::::::::::::::::::::: CCDS75 MTEVKCQHYKKKRTEQEETIASLQMEVCRLKK 10 20 30 190 200 210 220 230 240 pF1KE2 EEEDRIVTQNRVFAYLCKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQSEEEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 EEEDRIVTQNRVFAYLCKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQSEEEN 40 50 60 70 80 90 250 260 270 280 290 300 pF1KE2 DYRNLDASPTYKGLLMSLQNQLKESKSKIDALSSEKLNLQKDLETRPTQHELRLYKQQVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 DYRNLDASPTYKGLLMSLQNQLKESKSKIDALSSEKLNLQKDLETRPTQHELRLYKQQVK 100 110 120 130 140 150 310 320 330 340 350 360 pF1KE2 KLEKALKKNVKLQELINHKKAEDTEKKDEPSKYNQQQALIDQRYFQVLCSINSIIHNPRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 KLEKALKKNVKLQELINHKKAEDTEKKDEPSKYNQQQALIDQRYFQVLCSINSIIHNPRA 160 170 180 190 200 210 370 380 390 400 410 420 pF1KE2 PVIIYKQTKGGVQNFNKDLVQDCGFEHLVPVIEMWADQLTSLKDLYKSLKTLSAELVPWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 PVIIYKQTKGGVQNFNKDLVQDCGFEHLVPVIEMWADQLTSLKDLYKSLKTLSAELVPWL 220 230 240 250 260 270 430 440 450 460 470 480 pF1KE2 NLKKQDENEGIKVEDLLFIVDTMLEEVENKEKDSNMPHFQTLQAIVSHFQKLFDVPSLNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 NLKKQDENEGIKVEDLLFIVDTMLEEVENKEKDSNMPHFQTLQAIVSHFQKLFDVPSLNG 280 290 300 310 320 330 490 500 510 520 530 540 pF1KE2 VYPRMNEVYTRLGEMNNAVRNLQELLELDSSSSLCVLVSTVGKLCRLINEDVNEQVMQVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 VYPRMNEVYTRLGEMNNAVRNLQELLELDSSSSLCVLVSTVGKLCRLINEDVNEQVMQVL 340 350 360 370 380 390 550 560 570 580 590 pF1KE2 GPEDLQSIIYKLEEHEEFFPAFQAFTNDLLEILEIDDLDAIVPAVKKLKVLSY ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 GPEDLQSIIYKLEEHEEFFPAFQAFTNDLLEILEIDDLDAIVPAVKKLKVLSY 400 410 420 430 440 >>CCDS82842.1 CEP70 gene_id:80321|Hs108|chr3 (212 aa) initn: 1372 init1: 1372 opt: 1372 Z-score: 884.3 bits: 172.2 E(32554): 6.2e-43 Smith-Waterman score: 1372; 100.0% identity (100.0% similar) in 212 aa overlap (1-212:1-212) 10 20 30 40 50 60 pF1KE2 MFPVAPKPQDSSQPSDRLMTEKQQEEAEWESINVLLMMHGLKPLSLVKRTDLKDLIIFDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 MFPVAPKPQDSSQPSDRLMTEKQQEEAEWESINVLLMMHGLKPLSLVKRTDLKDLIIFDK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 QSSQRMRQNLKLLVEETSCQQNMIQELIETNQQLRNELQLEQSRAANQEQRANDLEQIME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 QSSQRMRQNLKLLVEETSCQQNMIQELIETNQQLRNELQLEQSRAANQEQRANDLEQIME 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 SVKSKIGELEDESLSRACHQQNKIKDLQKEQKTLQVKCQHYKKKRTEQEETIASLQMEVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 SVKSKIGELEDESLSRACHQQNKIKDLQKEQKTLQVKCQHYKKKRTEQEETIASLQMEVC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 RLKKEEEDRIVTQNRVFAYLCKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQS :::::::::::::::::::::::::::::::: CCDS82 RLKKEEEDRIVTQNRVFAYLCKRVPHTVLDRQ 190 200 210 250 260 270 280 290 300 pF1KE2 EEENDYRNLDASPTYKGLLMSLQNQLKESKSKIDALSSEKLNLQKDLETRPTQHELRLYK 597 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 15:39:42 2016 done: Mon Nov 7 15:39:42 2016 Total Scan time: 3.500 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]