FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1614, 126 aa 1>>>pF1KE1614 126 - 126 aa - 126 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0424+/-0.000622; mu= 10.9314+/- 0.037 mean_var=49.8186+/- 9.960, 0's: 0 Z-trim(109.5): 11 B-trim: 0 in 0/50 Lambda= 0.181710 statistics sampled from 10947 (10957) to 10947 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.743), E-opt: 0.2 (0.337), width: 16 Scan time: 1.650 The best scores are: opt bits E(32554) CCDS4147.1 HINT1 gene_id:3094|Hs108|chr5 ( 126) 865 233.9 2.1e-62 CCDS6594.1 HINT2 gene_id:84681|Hs108|chr9 ( 163) 543 149.5 6.7e-37 >>CCDS4147.1 HINT1 gene_id:3094|Hs108|chr5 (126 aa) initn: 865 init1: 865 opt: 865 Z-score: 1234.0 bits: 233.9 E(32554): 2.1e-62 Smith-Waterman score: 865; 100.0% identity (100.0% similar) in 126 aa overlap (1-126:1-126) 10 20 30 40 50 60 pF1KE1 MADEIAKAQVARPGGDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MADEIAKAQVARPGGDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 SQISVAEDDDESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 SQISVAEDDDESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQ 70 80 90 100 110 120 pF1KE1 MHWPPG :::::: CCDS41 MHWPPG >>CCDS6594.1 HINT2 gene_id:84681|Hs108|chr9 (163 aa) initn: 544 init1: 496 opt: 543 Z-score: 775.9 bits: 149.5 E(32554): 6.7e-37 Smith-Waterman score: 543; 59.5% identity (86.5% similar) in 126 aa overlap (3-126:38-163) 10 20 30 pF1KE1 MADEIAKAQVARPGG--DTIFGKIIRKEIPAK .:.:::: : ::: :::..:. : .:: CCDS65 AAGLRAARRAVAATGVRGGQVRGAAGVTDGNEVAKAQQATPGGAAPTIFSRILDKSLPAD 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE1 IIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGL :..::..::.:.:..::::.:::::::: : .:: ::..:..:::::..:.:. : :: CCDS65 ILYEDQQCLVFRDVAPQAPVHFLVIPKKPIPRISQAEEEDQQLLGHLLLVAKQTAKAEGL 70 80 90 100 110 120 100 110 120 pF1KE1 NKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG . :::.:.:.:. :.:::::.:.:::::::..:::: CCDS65 GDGYRLVINDGKLGAQSVYHLHIHVLGGRQLQWPPG 130 140 150 160 126 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 15:33:47 2016 done: Mon Nov 7 15:33:47 2016 Total Scan time: 1.650 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]