FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1583, 89 aa 1>>>pF1KE1583 89 - 89 aa - 89 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.7338+/-0.000782; mu= 11.2552+/- 0.047 mean_var=48.2340+/- 9.661, 0's: 0 Z-trim(105.6): 13 B-trim: 70 in 1/46 Lambda= 0.184671 statistics sampled from 8520 (8523) to 8520 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.669), E-opt: 0.2 (0.262), width: 16 Scan time: 1.210 The best scores are: opt bits E(32554) CCDS11601.1 DYNLL2 gene_id:140735|Hs108|chr17 ( 89) 600 166.9 1.5e-42 CCDS9200.1 DYNLL1 gene_id:8655|Hs108|chr12 ( 89) 568 158.4 5.4e-40 CCDS13979.1 DNAL4 gene_id:10126|Hs108|chr22 ( 105) 204 61.4 9.7e-11 >>CCDS11601.1 DYNLL2 gene_id:140735|Hs108|chr17 (89 aa) initn: 600 init1: 600 opt: 600 Z-score: 877.6 bits: 166.9 E(32554): 1.5e-42 Smith-Waterman score: 600; 100.0% identity (100.0% similar) in 89 aa overlap (1-89:1-89) 10 20 30 40 50 60 pF1KE1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 10 20 30 40 50 60 70 80 pF1KE1 NFGSYVTHETKHFIYFYLGQVAILLFKSG ::::::::::::::::::::::::::::: CCDS11 NFGSYVTHETKHFIYFYLGQVAILLFKSG 70 80 >>CCDS9200.1 DYNLL1 gene_id:8655|Hs108|chr12 (89 aa) initn: 568 init1: 568 opt: 568 Z-score: 831.5 bits: 158.4 E(32554): 5.4e-40 Smith-Waterman score: 568; 93.3% identity (98.9% similar) in 89 aa overlap (1-89:1-89) 10 20 30 40 50 60 pF1KE1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR : :::::::::::::.::::.:.:::::.:::::::::::.::::::::::::::::::: CCDS92 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 10 20 30 40 50 60 70 80 pF1KE1 NFGSYVTHETKHFIYFYLGQVAILLFKSG ::::::::::::::::::::::::::::: CCDS92 NFGSYVTHETKHFIYFYLGQVAILLFKSG 70 80 >>CCDS13979.1 DNAL4 gene_id:10126|Hs108|chr22 (105 aa) initn: 225 init1: 148 opt: 204 Z-score: 306.3 bits: 61.4 E(32554): 9.7e-11 Smith-Waterman score: 204; 33.7% identity (78.3% similar) in 83 aa overlap (7-87:21-103) 10 20 30 40 pF1KE1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKY-NIEKDIAAYIKKE .....:: :.:. .... . : ::. : ... : .::. CCDS13 MGETEGKKDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKET 10 20 30 40 50 60 50 60 70 80 pF1KE1 FDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLG-QVAILLFKSG .:::.. .:: ..:..:: .:::.:...:.:.: .:. ..: CCDS13 MDKKFGSSWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWKCS 70 80 90 100 89 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 15:30:34 2016 done: Mon Nov 7 15:30:34 2016 Total Scan time: 1.210 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]