FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4034, 244 aa 1>>>pF1KE4034 244 - 244 aa - 244 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0929+/-0.000303; mu= 16.6718+/- 0.019 mean_var=91.6462+/-18.398, 0's: 0 Z-trim(119.8): 96 B-trim: 873 in 1/51 Lambda= 0.133973 statistics sampled from 34197 (34310) to 34197 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.761), E-opt: 0.2 (0.402), width: 16 Scan time: 7.700 The best scores are: opt bits E(85289) XP_005265776 (OMIM: 612405) PREDICTED: ADP-ribosyl ( 265) 442 94.8 1.6e-19 XP_016871749 (OMIM: 604695) PREDICTED: ADP-ribosyl ( 182) 320 71.1 1.5e-12 NP_004302 (OMIM: 604695) ADP-ribosylation factor-l ( 182) 320 71.1 1.5e-12 NP_001654 (OMIM: 600464) ADP-ribosylation factor 6 ( 175) 313 69.7 3.7e-12 NP_001168 (OMIM: 603425) ADP-ribosylation factor-l ( 181) 313 69.7 3.8e-12 NP_060654 (OMIM: 616596) ADP-ribosylation factor-l ( 186) 307 68.6 8.7e-12 NP_996802 (OMIM: 612405) ADP-ribosylation factor-l ( 123) 304 67.8 9.8e-12 XP_006714099 (OMIM: 612405) PREDICTED: ADP-ribosyl ( 123) 304 67.8 9.8e-12 XP_005265777 (OMIM: 612405) PREDICTED: ADP-ribosyl ( 123) 304 67.8 9.8e-12 NP_620150 (OMIM: 616597) ADP-ribosylation factor-l ( 186) 302 67.6 1.7e-11 NP_001658 (OMIM: 601175) ADP-ribosylation factor-l ( 184) 298 66.8 2.9e-11 NP_001651 (OMIM: 601177) ADP-ribosylation factor 4 ( 180) 297 66.6 3.3e-11 NP_001019398 (OMIM: 103180) ADP-ribosylation facto ( 181) 295 66.3 4.3e-11 NP_001649 (OMIM: 103180) ADP-ribosylation factor 1 ( 181) 295 66.3 4.3e-11 NP_001650 (OMIM: 103190) ADP-ribosylation factor 3 ( 181) 295 66.3 4.3e-11 XP_005268913 (OMIM: 103190) PREDICTED: ADP-ribosyl ( 181) 295 66.3 4.3e-11 NP_001019397 (OMIM: 103180) ADP-ribosylation facto ( 181) 295 66.3 4.3e-11 NP_001019399 (OMIM: 103180) ADP-ribosylation facto ( 181) 295 66.3 4.3e-11 NP_001653 (OMIM: 103188) ADP-ribosylation factor 5 ( 180) 291 65.5 7.3e-11 NP_997625 (OMIM: 604786) ADP-ribosylation factor-l ( 200) 289 65.1 1e-10 NP_001032241 (OMIM: 604786) ADP-ribosylation facto ( 200) 289 65.1 1e-10 NP_001182325 (OMIM: 604786) ADP-ribosylation facto ( 200) 289 65.1 1e-10 NP_005729 (OMIM: 604786) ADP-ribosylation factor-l ( 200) 289 65.1 1e-10 XP_011523084 (OMIM: 600732) PREDICTED: ADP-ribosyl ( 201) 287 64.8 1.3e-10 NP_001652 (OMIM: 600732) ADP-ribosylation factor-l ( 201) 287 64.8 1.3e-10 XP_005266310 (OMIM: 609351) PREDICTED: ADP-ribosyl ( 196) 284 64.2 2e-10 NP_612459 (OMIM: 609351) ADP-ribosylation factor-l ( 196) 284 64.2 2e-10 NP_150231 (OMIM: 601747) E3 ubiquitin-protein liga ( 546) 276 63.1 1.2e-09 NP_005728 (OMIM: 604787) ADP-ribosylation factor-l ( 192) 270 61.5 1.3e-09 NP_001269360 (OMIM: 604787) ADP-ribosylation facto ( 201) 270 61.5 1.3e-09 XP_005248554 (OMIM: 601747) PREDICTED: E3 ubiquiti ( 398) 272 62.2 1.6e-09 NP_079323 (OMIM: 614439) ADP-ribosylation factor-l ( 192) 267 60.9 1.9e-09 XP_016864933 (OMIM: 601747) PREDICTED: E3 ubiquiti ( 569) 272 62.3 2e-09 NP_150230 (OMIM: 601747) E3 ubiquitin-protein liga ( 569) 272 62.3 2e-09 NP_001647 (OMIM: 601747) E3 ubiquitin-protein liga ( 574) 272 62.3 2e-09 NP_878899 (OMIM: 608922,612291) ADP-ribosylation f ( 428) 264 60.7 4.9e-09 NP_001167621 (OMIM: 608922,612291) ADP-ribosylatio ( 428) 264 60.7 4.9e-09 NP_036229 (OMIM: 608960) ADP-ribosylation factor-l ( 179) 257 58.9 6.9e-09 NP_816931 (OMIM: 209900,268000,600151,608845,61357 ( 186) 255 58.5 9.3e-09 XP_016862800 (OMIM: 209900,268000,600151,608845,61 ( 186) 255 58.5 9.3e-09 NP_115522 (OMIM: 209900,268000,600151,608845,61357 ( 186) 255 58.5 9.3e-09 NP_001265222 (OMIM: 209900,268000,600151,608845,61 ( 186) 255 58.5 9.3e-09 NP_001186674 (OMIM: 601175) ADP-ribosylation facto ( 157) 254 58.3 9.4e-09 NP_001310442 (OMIM: 209900,268000,600151,608845,61 ( 193) 255 58.6 9.5e-09 NP_848930 (OMIM: 608909) ADP-ribosylation factor-l ( 179) 254 58.3 1e-08 XP_016862801 (OMIM: 209900,268000,600151,608845,61 ( 159) 252 57.9 1.2e-08 NP_001310443 (OMIM: 209900,268000,600151,608845,61 ( 159) 252 57.9 1.2e-08 XP_016856722 (OMIM: 103180) PREDICTED: ADP-ribosyl ( 212) 252 58.0 1.5e-08 XP_011510837 (OMIM: 608922,612291) PREDICTED: ADP- ( 403) 254 58.7 1.8e-08 XP_006719454 (OMIM: 103190) PREDICTED: ADP-ribosyl ( 137) 238 55.1 7.3e-08 >>XP_005265776 (OMIM: 612405) PREDICTED: ADP-ribosylatio (265 aa) initn: 441 init1: 403 opt: 442 Z-score: 471.7 bits: 94.8 E(85289): 1.6e-19 Smith-Waterman score: 442; 37.3% identity (69.6% similar) in 217 aa overlap (34-244:49-261) 10 20 30 40 50 60 pF1KE4 RPLGPLVLALGGAAAVLGSVLFILWKTYFGRGRERRWDRGEAWWGAEAARLPEWDEWDPE .:.:.. : . : :. . : . . : XP_005 KIGEKGREEKVKRKEVEQKIKQKQEKQERRKGKEKEEKRTK--QGKETNKEKEQFKGQEE 20 30 40 50 60 70 70 80 90 100 110 pF1KE4 DEEDEEPAL-----EELEQ-REVLVLGLDGAGKSTFLRVLSGKPPLEGHIPTWGFNSVRL :... .: : ::. ...::::::::::.. :. :... .. :: ::..: . XP_005 KGENKDSTLTRTPLEPLEKNKQILVLGLDGAGKTSVLHSLASNRVQHSVAPTQGFHAVCI 80 90 100 110 120 130 120 130 140 150 160 170 pF1KE4 PTKDFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVVDSADRLRLPWARQELHKLLDKDPD :.: ....::::::. .: ::. ..:. .:.:::::::. ::: :.. ::.:. .: XP_005 NTEDSQMEFLEIGGSKPFRSYWEMYLSKGLLLIFVVDSADHSRLPEAKKYLHQLIAANPV 140 150 160 170 180 190 180 190 200 210 220 230 pF1KE4 LPVVVVANKQDLSEAMSMGELQRELGLQAIDNQREVFLLAASIAPAGPTFEEPGTVHIWK ::.:: :::::: :. . .... :.:. . :.:..::... .. : : :.:.. : XP_005 LPLVVFANKQDLEAAYHITDIHEALALSEVGNDRKMFLFGTYLTKNGS--EIPSTMQDAK 200 210 220 230 240 250 240 pF1KE4 LLLELLS :. :. XP_005 DLIAQLAADVQ 260 >>XP_016871749 (OMIM: 604695) PREDICTED: ADP-ribosylatio (182 aa) initn: 314 init1: 201 opt: 320 Z-score: 346.3 bits: 71.1 E(85289): 1.5e-12 Smith-Waterman score: 320; 38.4% identity (74.6% similar) in 138 aa overlap (76-210:16-151) 50 60 70 80 90 100 pF1KE4 WWGAEAARLPEWDEWDPEDEEDEEPALEELEQREVLVLGLDGAGKSTFLRVLSGKPPLEG .. ..:.::::.:::.:.:. :... . XP_016 MGLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDI--S 10 20 30 40 110 120 130 140 150 160 pF1KE4 HI-PTWGFNSVRLPTKDFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVVDSADRLRLPWA :: :: ::: . .. :.... .:::....: :::.. ..:.:..:.::::: :. . XP_016 HITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWKNYFENTDILIYVIDSADRKRFEET 50 60 70 80 90 100 170 180 190 200 210 220 pF1KE4 RQELHKLLDKDPD--LPVVVVANKQDLSEAMSMGELQRELGLQAIDNQREVFLLAASIAP ::: .::... .::.. :::::: : .:. . :.:..: .. XP_016 GQELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTG 110 120 130 140 150 160 230 240 pF1KE4 AGPTFEEPGTVHIWKLLLELLS XP_016 EGVQDGMNWVCKNVNAKKK 170 180 >>NP_004302 (OMIM: 604695) ADP-ribosylation factor-like (182 aa) initn: 314 init1: 201 opt: 320 Z-score: 346.3 bits: 71.1 E(85289): 1.5e-12 Smith-Waterman score: 320; 38.4% identity (74.6% similar) in 138 aa overlap (76-210:16-151) 50 60 70 80 90 100 pF1KE4 WWGAEAARLPEWDEWDPEDEEDEEPALEELEQREVLVLGLDGAGKSTFLRVLSGKPPLEG .. ..:.::::.:::.:.:. :... . NP_004 MGLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDI--S 10 20 30 40 110 120 130 140 150 160 pF1KE4 HI-PTWGFNSVRLPTKDFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVVDSADRLRLPWA :: :: ::: . .. :.... .:::....: :::.. ..:.:..:.::::: :. . NP_004 HITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWKNYFENTDILIYVIDSADRKRFEET 50 60 70 80 90 100 170 180 190 200 210 220 pF1KE4 RQELHKLLDKDPD--LPVVVVANKQDLSEAMSMGELQRELGLQAIDNQREVFLLAASIAP ::: .::... .::.. :::::: : .:. . :.:..: .. NP_004 GQELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTG 110 120 130 140 150 160 230 240 pF1KE4 AGPTFEEPGTVHIWKLLLELLS NP_004 EGVQDGMNWVCKNVNAKKK 170 180 >>NP_001654 (OMIM: 600464) ADP-ribosylation factor 6 [Ho (175 aa) initn: 310 init1: 186 opt: 313 Z-score: 339.2 bits: 69.7 E(85289): 3.7e-12 Smith-Waterman score: 313; 37.8% identity (67.3% similar) in 156 aa overlap (76-229:13-164) 50 60 70 80 90 100 pF1KE4 WWGAEAARLPEWDEWDPEDEEDEEPALEELEQREVLVLGLDGAGKSTFLRVLSGKPPLEG :.: .:.::::.:::.:.: :. . NP_001 MGKVLSKIFGNKEMR-ILMLGLDAAGKTTILYKLKLGQSVTT 10 20 30 40 110 120 130 140 150 160 pF1KE4 HIPTWGFNSVRLPTKDFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVVDSADRLRLPWAR ::: ::: . :. . .. ..::....: :... . .. :.:::: ::: :. :: NP_001 -IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEAR 50 60 70 80 90 100 170 180 190 200 210 220 pF1KE4 QELHKLL-DKDP-DLPVVVVANKQDLSEAMSMGELQRELGLQAIDNQREVFLLAASIAPA ::::... :.. : ... :::::: .::. :.:..::: : .. . . : : . NP_001 QELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRN--WYVQPSCATS 110 120 130 140 150 230 240 pF1KE4 GPTFEEPGTVHIWKLLLELLS : . : NP_001 GDGLYEGLTWLTSNYKS 160 170 >>NP_001168 (OMIM: 603425) ADP-ribosylation factor-like (181 aa) initn: 310 init1: 165 opt: 313 Z-score: 339.0 bits: 69.7 E(85289): 3.8e-12 Smith-Waterman score: 313; 37.8% identity (69.6% similar) in 148 aa overlap (76-219:17-161) 50 60 70 80 90 100 pF1KE4 WWGAEAARLPEWDEWDPEDEEDEEPALEELEQREVLVLGLDGAGKSTFL-RVLSGKPPLE :.: .:.::::::::.:.: :. :. . NP_001 MGGFFSSIFSSLFGTREMR-ILILGLDGAGKTTILYRLQVGE--VV 10 20 30 40 110 120 130 140 150 160 pF1KE4 GHIPTWGFNSVRLPTKDFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVVDSADRLRLPWA ::: ::: . :... .. ..::. ..: ::. . :..:....:::: :: :. . NP_001 TTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGIS 50 60 70 80 90 100 170 180 190 200 210 220 pF1KE4 RQELHKLLDKDP--DLPVVVVANKQDLSEAMSMGELQRELGLQAI-DNQREVFLLAASIA ..:: .:... .:: :::::. .::. .:. ::: :. : . ..: .:. NP_001 KSELVAMLEEEELRKAILVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKG 110 120 130 140 150 160 230 240 pF1KE4 PAGPTFEEPGTVHIWKLLLELLS NP_001 TGLDEAMEWLVETLKSRQ 170 180 >>NP_060654 (OMIM: 616596) ADP-ribosylation factor-like (186 aa) initn: 302 init1: 238 opt: 307 Z-score: 332.6 bits: 68.6 E(85289): 8.7e-12 Smith-Waterman score: 307; 36.2% identity (73.0% similar) in 141 aa overlap (76-213:19-157) 50 60 70 80 90 100 pF1KE4 WWGAEAARLPEWDEWDPEDEEDEEPALEELEQREVLVLGLDGAGKSTFLRVLSGKPPLEG :. :. ..::. .::.::. :... : NP_060 MLALISRLLDWFRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSED 10 20 30 40 110 120 130 140 150 160 pF1KE4 HIPTWGFNSVRLPTKDFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVVDSADRLRLPWAR ::: ::: .. . . . .:::. .: .:... :...:...:.::: .. .: NP_060 MIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASR 50 60 70 80 90 100 170 180 190 200 210 220 pF1KE4 QELHKLLDKDPDL---PVVVVANKQDLSEAMSMGELQRELGLQAIDNQREVFLLAASIAP .:::.:::: :.: ::.:..::.:: .:.. .: ....:.::.. ::. NP_060 NELHNLLDK-PQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQD-REICCYSISCKE 110 120 130 140 150 160 230 240 pF1KE4 AGPTFEEPGTVHIWKLLLELLS NP_060 KDNIDITLQWLIQHSKSRRS 170 180 >>NP_996802 (OMIM: 612405) ADP-ribosylation factor-like (123 aa) initn: 324 init1: 291 opt: 304 Z-score: 331.6 bits: 67.8 E(85289): 9.8e-12 Smith-Waterman score: 304; 41.3% identity (74.4% similar) in 121 aa overlap (124-244:1-119) 100 110 120 130 140 150 pF1KE4 LRVLSGKPPLEGHIPTWGFNSVRLPTKDFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVV ...::::::. .: ::. ..:. .:.::: NP_996 MEFLEIGGSKPFRSYWEMYLSKGLLLIFVV 10 20 30 160 170 180 190 200 210 pF1KE4 DSADRLRLPWARQELHKLLDKDPDLPVVVVANKQDLSEAMSMGELQRELGLQAIDNQREV ::::. ::: :.. ::.:. .: ::.:: :::::: :. . .... :.:. . :.:.. NP_996 DSADHSRLPEAKKYLHQLIAANPVLPLVVFANKQDLEAAYHITDIHEALALSEVGNDRKM 40 50 60 70 80 90 220 230 240 pF1KE4 FLLAASIAPAGPTFEEPGTVHIWKLLLELLS ::... .. : : :.:.. : :. :. NP_996 FLFGTYLTKNGS--EIPSTMQDAKDLIAQLAADVQ 100 110 120 >>XP_006714099 (OMIM: 612405) PREDICTED: ADP-ribosylatio (123 aa) initn: 324 init1: 291 opt: 304 Z-score: 331.6 bits: 67.8 E(85289): 9.8e-12 Smith-Waterman score: 304; 41.3% identity (74.4% similar) in 121 aa overlap (124-244:1-119) 100 110 120 130 140 150 pF1KE4 LRVLSGKPPLEGHIPTWGFNSVRLPTKDFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVV ...::::::. .: ::. ..:. .:.::: XP_006 MEFLEIGGSKPFRSYWEMYLSKGLLLIFVV 10 20 30 160 170 180 190 200 210 pF1KE4 DSADRLRLPWARQELHKLLDKDPDLPVVVVANKQDLSEAMSMGELQRELGLQAIDNQREV ::::. ::: :.. ::.:. .: ::.:: :::::: :. . .... :.:. . :.:.. XP_006 DSADHSRLPEAKKYLHQLIAANPVLPLVVFANKQDLEAAYHITDIHEALALSEVGNDRKM 40 50 60 70 80 90 220 230 240 pF1KE4 FLLAASIAPAGPTFEEPGTVHIWKLLLELLS ::... .. : : :.:.. : :. :. XP_006 FLFGTYLTKNGS--EIPSTMQDAKDLIAQLAADVQ 100 110 120 >>XP_005265777 (OMIM: 612405) PREDICTED: ADP-ribosylatio (123 aa) initn: 324 init1: 291 opt: 304 Z-score: 331.6 bits: 67.8 E(85289): 9.8e-12 Smith-Waterman score: 304; 41.3% identity (74.4% similar) in 121 aa overlap (124-244:1-119) 100 110 120 130 140 150 pF1KE4 LRVLSGKPPLEGHIPTWGFNSVRLPTKDFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVV ...::::::. .: ::. ..:. .:.::: XP_005 MEFLEIGGSKPFRSYWEMYLSKGLLLIFVV 10 20 30 160 170 180 190 200 210 pF1KE4 DSADRLRLPWARQELHKLLDKDPDLPVVVVANKQDLSEAMSMGELQRELGLQAIDNQREV ::::. ::: :.. ::.:. .: ::.:: :::::: :. . .... :.:. . :.:.. XP_005 DSADHSRLPEAKKYLHQLIAANPVLPLVVFANKQDLEAAYHITDIHEALALSEVGNDRKM 40 50 60 70 80 90 220 230 240 pF1KE4 FLLAASIAPAGPTFEEPGTVHIWKLLLELLS ::... .. : : :.:.. : :. :. XP_005 FLFGTYLTKNGS--EIPSTMQDAKDLIAQLAADVQ 100 110 120 >>NP_620150 (OMIM: 616597) ADP-ribosylation factor-like (186 aa) initn: 296 init1: 231 opt: 302 Z-score: 327.3 bits: 67.6 E(85289): 1.7e-11 Smith-Waterman score: 302; 36.7% identity (70.0% similar) in 150 aa overlap (67-213:10-157) 40 50 60 70 80 90 pF1KE4 ERRWDRGEAWWGAEAARLPEWDEWDPEDEEDEEPALEELEQREVLVLGLDGAGKSTFLRV : :: :. :. ..::. .::.::. : NP_620 MIALFNKLLDWFKALFWKEEMELTLVGLQYSGKTTFVNV 10 20 30 100 110 120 130 140 150 pF1KE4 LSGKPPLEGHIPTWGFNSVRLPTKDFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVVDSA ... : ::: ::: .. . . : .:::. .: .:... :...:..::.: NP_620 IASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAA 40 50 60 70 80 90 160 170 180 190 200 210 pF1KE4 DRLRLPWARQELHKLLDKDPDL---PVVVVANKQDLSEAMSMGELQRELGLQAIDNQREV :. .. ...:::.:::: :.: ::.:..::.:: :.. :: ....:.::.. ::. NP_620 DQEKIEASKNELHNLLDK-PQLQGIPVLVLGNKRDLPGALDEKELIEKMNLSAIQD-REI 100 110 120 130 140 150 220 230 240 pF1KE4 FLLAASIAPAGPTFEEPGTVHIWKLLLELLS NP_620 CCYSISCKEKDNIDITLQWLIQHSKSRRS 160 170 180 244 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 15:14:47 2016 done: Mon Nov 7 15:14:48 2016 Total Scan time: 7.700 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]