Result of FASTA (omim) for
pFN21AB8985
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8985, 387 aa
1>>>pF1KB8985 387 - 387 aa - 387 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.9474+/-0.000412; mu= -4.6578+/- 0.025
mean_var=345.8332+/-75.527, 0's: 0 Z-trim(121.9): 1652 B-trim: 3900 in 2/55
Lambda= 0.068967
statistics sampled from 37016 (39128) to 37016 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.784), E-opt: 0.2 (0.459), width: 16
Scan time: 8.170
The best scores are: opt bits E(85289)
NP_004421 (OMIM: 602419) early growth response pro ( 387) 2704 282.8 9.7e-76
XP_011542731 (OMIM: 602419) PREDICTED: early growt ( 406) 2382 250.7 4.4e-66
NP_001186809 (OMIM: 602419) early growth response ( 349) 2380 250.5 4.6e-66
XP_005273483 (OMIM: 602419) PREDICTED: early growt ( 349) 2380 250.5 4.6e-66
XP_005273482 (OMIM: 602419) PREDICTED: early growt ( 442) 2380 250.6 5.4e-66
NP_001186810 (OMIM: 602419) early growth response ( 333) 2362 248.7 1.5e-65
NP_001955 (OMIM: 128990) early growth response pro ( 543) 968 110.2 1.2e-23
NP_001129651 (OMIM: 129010,145900,605253,607678) E ( 426) 768 90.2 1e-17
NP_001307966 (OMIM: 129010,145900,605253,607678) E ( 426) 768 90.2 1e-17
NP_001129649 (OMIM: 129010,145900,605253,607678) E ( 476) 768 90.2 1.1e-17
NP_000390 (OMIM: 129010,145900,605253,607678) E3 S ( 476) 768 90.2 1.1e-17
NP_001129650 (OMIM: 129010,145900,605253,607678) E ( 476) 768 90.2 1.1e-17
XP_011537729 (OMIM: 129010,145900,605253,607678) P ( 489) 768 90.2 1.1e-17
NP_001956 (OMIM: 128992) early growth response pro ( 589) 574 71.0 8.1e-12
NP_001185480 (OMIM: 106210,136680,156240,194070,19 ( 302) 427 56.1 1.3e-07
NP_000369 (OMIM: 106210,136680,156240,194070,19407 ( 497) 427 56.3 1.8e-07
NP_077742 (OMIM: 106210,136680,156240,194070,19407 ( 514) 427 56.3 1.9e-07
NP_001185481 (OMIM: 106210,136680,156240,194070,19 ( 288) 411 54.5 3.8e-07
NP_077744 (OMIM: 106210,136680,156240,194070,19407 ( 517) 411 54.7 5.7e-07
XP_006711416 (OMIM: 607646) PREDICTED: zinc finger ( 539) 355 49.2 2.8e-05
XP_006711421 (OMIM: 607646) PREDICTED: zinc finger ( 539) 355 49.2 2.8e-05
XP_006711419 (OMIM: 607646) PREDICTED: zinc finger ( 539) 355 49.2 2.8e-05
XP_011507901 (OMIM: 607646) PREDICTED: zinc finger ( 539) 355 49.2 2.8e-05
XP_006711412 (OMIM: 607646) PREDICTED: zinc finger ( 539) 355 49.2 2.8e-05
NP_001243384 (OMIM: 607646) zinc finger and BTB do ( 539) 355 49.2 2.8e-05
XP_006711420 (OMIM: 607646) PREDICTED: zinc finger ( 539) 355 49.2 2.8e-05
XP_006711422 (OMIM: 607646) PREDICTED: zinc finger ( 539) 355 49.2 2.8e-05
XP_006711417 (OMIM: 607646) PREDICTED: zinc finger ( 539) 355 49.2 2.8e-05
NP_001239335 (OMIM: 607646) zinc finger and BTB do ( 573) 355 49.2 2.9e-05
XP_011507900 (OMIM: 607646) PREDICTED: zinc finger ( 573) 355 49.2 2.9e-05
XP_016856888 (OMIM: 607646) PREDICTED: zinc finger ( 630) 355 49.3 3.1e-05
NP_037512 (OMIM: 603994) zinc finger protein 112 i ( 907) 348 48.7 6.4e-05
NP_001076804 (OMIM: 603994) zinc finger protein 11 ( 913) 348 48.7 6.5e-05
XP_016867772 (OMIM: 603989) PREDICTED: zinc finger ( 783) 346 48.5 6.7e-05
XP_016867774 (OMIM: 603989) PREDICTED: zinc finger ( 783) 346 48.5 6.7e-05
NP_057304 (OMIM: 603989) zinc finger protein 107 i ( 783) 346 48.5 6.7e-05
XP_016867775 (OMIM: 603989) PREDICTED: zinc finger ( 783) 346 48.5 6.7e-05
NP_001013768 (OMIM: 603989) zinc finger protein 10 ( 783) 346 48.5 6.7e-05
XP_016867773 (OMIM: 603989) PREDICTED: zinc finger ( 783) 346 48.5 6.7e-05
NP_001269289 (OMIM: 603989) zinc finger protein 10 ( 820) 346 48.5 6.9e-05
NP_001269288 (OMIM: 603989) zinc finger protein 10 ( 852) 346 48.5 7.1e-05
XP_016878355 (OMIM: 604752) PREDICTED: zinc finger ( 487) 337 47.4 9e-05
NP_008894 (OMIM: 194529) zinc finger protein 22 [H ( 224) 329 46.2 9.1e-05
XP_011511865 (OMIM: 194648,615226) PREDICTED: zinc ( 398) 333 46.9 0.0001
NP_003432 (OMIM: 194648,615226) zinc finger protei ( 474) 333 46.9 0.00012
XP_016878354 (OMIM: 604752) PREDICTED: zinc finger ( 711) 337 47.5 0.00012
NP_001252517 (OMIM: 604752) zinc finger protein 26 ( 711) 337 47.5 0.00012
NP_003405 (OMIM: 604752) zinc finger protein 267 i ( 743) 337 47.5 0.00012
XP_011511864 (OMIM: 194648,615226) PREDICTED: zinc ( 502) 333 47.0 0.00012
XP_016864080 (OMIM: 194648,615226) PREDICTED: zinc ( 534) 333 47.0 0.00013
>>NP_004421 (OMIM: 602419) early growth response protein (387 aa)
initn: 2704 init1: 2704 opt: 2704 Z-score: 1480.7 bits: 282.8 E(85289): 9.7e-76
Smith-Waterman score: 2704; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:1-387)
10 20 30 40 50 60
pF1KB8 MTGKLAEKLPVTMSSLLNQLPDNLYPEEIPSALNLFSGSSDSVVHYNQMATENVMDIGLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MTGKLAEKLPVTMSSLLNQLPDNLYPEEIPSALNLFSGSSDSVVHYNQMATENVMDIGLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 NEKPNPELSYSGSFQPAPGNKTVTYLGKFAFDSPSNWCQDNIISLMSAGILGVPPASGAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 NEKPNPELSYSGSFQPAPGNKTVTYLGKFAFDSPSNWCQDNIISLMSAGILGVPPASGAL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 STQTSTASMVQPPQGDVEAMYPALPPYSNCGDLYSEPVSFHDPQGNPGLAYSPQDYQSAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 STQTSTASMVQPPQGDVEAMYPALPPYSNCGDLYSEPVSFHDPQGNPGLAYSPQDYQSAK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 PALDSNLFPMIPDYNLYHHPNDMGSIPEHKPFQGMDPIRVNPPPITPLETIKAFKDKQIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 PALDSNLFPMIPDYNLYHHPNDMGSIPEHKPFQGMDPIRVNPPPITPLETIKAFKDKQIH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 PGFGSLPQPPLTLKPIRPRKYPNRPSKTPLHERPHACPAEGCDRRFSRSDELTRHLRIHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 PGFGSLPQPPLTLKPIRPRKYPNRPSKTPLHERPHACPAEGCDRRFSRSDELTRHLRIHT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 GHKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFACEFCGRKFARSDERKRHAKIHLKQKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 GHKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFACEFCGRKFARSDERKRHAKIHLKQKE
310 320 330 340 350 360
370 380
pF1KB8 KKAEKGGAPSASSAPPVSLAPVVTTCA
:::::::::::::::::::::::::::
NP_004 KKAEKGGAPSASSAPPVSLAPVVTTCA
370 380
>>XP_011542731 (OMIM: 602419) PREDICTED: early growth re (406 aa)
initn: 2380 init1: 2380 opt: 2382 Z-score: 1307.3 bits: 250.7 E(85289): 4.4e-66
Smith-Waterman score: 2382; 94.7% identity (96.6% similar) in 358 aa overlap (30-387:49-406)
10 20 30 40 50
pF1KB8 MTGKLAEKLPVTMSSLLNQLPDNLYPEEIPSALNLFSGSSDSVVHYNQMATENVMDIGL
:.. .: : .. . . ::::::::
XP_011 PTHSSRPPRSRRLGWRRHGRGFGSPGWGQPPTGGSLPPGMEPCAAWSPRGGRENVMDIGL
20 30 40 50 60 70
60 70 80 90 100 110
pF1KB8 TNEKPNPELSYSGSFQPAPGNKTVTYLGKFAFDSPSNWCQDNIISLMSAGILGVPPASGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TNEKPNPELSYSGSFQPAPGNKTVTYLGKFAFDSPSNWCQDNIISLMSAGILGVPPASGA
80 90 100 110 120 130
120 130 140 150 160 170
pF1KB8 LSTQTSTASMVQPPQGDVEAMYPALPPYSNCGDLYSEPVSFHDPQGNPGLAYSPQDYQSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSTQTSTASMVQPPQGDVEAMYPALPPYSNCGDLYSEPVSFHDPQGNPGLAYSPQDYQSA
140 150 160 170 180 190
180 190 200 210 220 230
pF1KB8 KPALDSNLFPMIPDYNLYHHPNDMGSIPEHKPFQGMDPIRVNPPPITPLETIKAFKDKQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KPALDSNLFPMIPDYNLYHHPNDMGSIPEHKPFQGMDPIRVNPPPITPLETIKAFKDKQI
200 210 220 230 240 250
240 250 260 270 280 290
pF1KB8 HPGFGSLPQPPLTLKPIRPRKYPNRPSKTPLHERPHACPAEGCDRRFSRSDELTRHLRIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HPGFGSLPQPPLTLKPIRPRKYPNRPSKTPLHERPHACPAEGCDRRFSRSDELTRHLRIH
260 270 280 290 300 310
300 310 320 330 340 350
pF1KB8 TGHKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFACEFCGRKFARSDERKRHAKIHLKQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TGHKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFACEFCGRKFARSDERKRHAKIHLKQK
320 330 340 350 360 370
360 370 380
pF1KB8 EKKAEKGGAPSASSAPPVSLAPVVTTCA
::::::::::::::::::::::::::::
XP_011 EKKAEKGGAPSASSAPPVSLAPVVTTCA
380 390 400
>>NP_001186809 (OMIM: 602419) early growth response prot (349 aa)
initn: 2380 init1: 2380 opt: 2380 Z-score: 1307.1 bits: 250.5 E(85289): 4.6e-66
Smith-Waterman score: 2380; 100.0% identity (100.0% similar) in 336 aa overlap (52-387:14-349)
30 40 50 60 70 80
pF1KB8 DNLYPEEIPSALNLFSGSSDSVVHYNQMATENVMDIGLTNEKPNPELSYSGSFQPAPGNK
::::::::::::::::::::::::::::::
NP_001 MEPCAAWSPRGGRENVMDIGLTNEKPNPELSYSGSFQPAPGNK
10 20 30 40
90 100 110 120 130 140
pF1KB8 TVTYLGKFAFDSPSNWCQDNIISLMSAGILGVPPASGALSTQTSTASMVQPPQGDVEAMY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TVTYLGKFAFDSPSNWCQDNIISLMSAGILGVPPASGALSTQTSTASMVQPPQGDVEAMY
50 60 70 80 90 100
150 160 170 180 190 200
pF1KB8 PALPPYSNCGDLYSEPVSFHDPQGNPGLAYSPQDYQSAKPALDSNLFPMIPDYNLYHHPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PALPPYSNCGDLYSEPVSFHDPQGNPGLAYSPQDYQSAKPALDSNLFPMIPDYNLYHHPN
110 120 130 140 150 160
210 220 230 240 250 260
pF1KB8 DMGSIPEHKPFQGMDPIRVNPPPITPLETIKAFKDKQIHPGFGSLPQPPLTLKPIRPRKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DMGSIPEHKPFQGMDPIRVNPPPITPLETIKAFKDKQIHPGFGSLPQPPLTLKPIRPRKY
170 180 190 200 210 220
270 280 290 300 310 320
pF1KB8 PNRPSKTPLHERPHACPAEGCDRRFSRSDELTRHLRIHTGHKPFQCRICMRSFSRSDHLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PNRPSKTPLHERPHACPAEGCDRRFSRSDELTRHLRIHTGHKPFQCRICMRSFSRSDHLT
230 240 250 260 270 280
330 340 350 360 370 380
pF1KB8 THIRTHTGEKPFACEFCGRKFARSDERKRHAKIHLKQKEKKAEKGGAPSASSAPPVSLAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 THIRTHTGEKPFACEFCGRKFARSDERKRHAKIHLKQKEKKAEKGGAPSASSAPPVSLAP
290 300 310 320 330 340
pF1KB8 VVTTCA
::::::
NP_001 VVTTCA
>>XP_005273483 (OMIM: 602419) PREDICTED: early growth re (349 aa)
initn: 2380 init1: 2380 opt: 2380 Z-score: 1307.1 bits: 250.5 E(85289): 4.6e-66
Smith-Waterman score: 2380; 100.0% identity (100.0% similar) in 336 aa overlap (52-387:14-349)
30 40 50 60 70 80
pF1KB8 DNLYPEEIPSALNLFSGSSDSVVHYNQMATENVMDIGLTNEKPNPELSYSGSFQPAPGNK
::::::::::::::::::::::::::::::
XP_005 MEPCAAWSPRGGRENVMDIGLTNEKPNPELSYSGSFQPAPGNK
10 20 30 40
90 100 110 120 130 140
pF1KB8 TVTYLGKFAFDSPSNWCQDNIISLMSAGILGVPPASGALSTQTSTASMVQPPQGDVEAMY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TVTYLGKFAFDSPSNWCQDNIISLMSAGILGVPPASGALSTQTSTASMVQPPQGDVEAMY
50 60 70 80 90 100
150 160 170 180 190 200
pF1KB8 PALPPYSNCGDLYSEPVSFHDPQGNPGLAYSPQDYQSAKPALDSNLFPMIPDYNLYHHPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PALPPYSNCGDLYSEPVSFHDPQGNPGLAYSPQDYQSAKPALDSNLFPMIPDYNLYHHPN
110 120 130 140 150 160
210 220 230 240 250 260
pF1KB8 DMGSIPEHKPFQGMDPIRVNPPPITPLETIKAFKDKQIHPGFGSLPQPPLTLKPIRPRKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DMGSIPEHKPFQGMDPIRVNPPPITPLETIKAFKDKQIHPGFGSLPQPPLTLKPIRPRKY
170 180 190 200 210 220
270 280 290 300 310 320
pF1KB8 PNRPSKTPLHERPHACPAEGCDRRFSRSDELTRHLRIHTGHKPFQCRICMRSFSRSDHLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PNRPSKTPLHERPHACPAEGCDRRFSRSDELTRHLRIHTGHKPFQCRICMRSFSRSDHLT
230 240 250 260 270 280
330 340 350 360 370 380
pF1KB8 THIRTHTGEKPFACEFCGRKFARSDERKRHAKIHLKQKEKKAEKGGAPSASSAPPVSLAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 THIRTHTGEKPFACEFCGRKFARSDERKRHAKIHLKQKEKKAEKGGAPSASSAPPVSLAP
290 300 310 320 330 340
pF1KB8 VVTTCA
::::::
XP_005 VVTTCA
>>XP_005273482 (OMIM: 602419) PREDICTED: early growth re (442 aa)
initn: 2380 init1: 2380 opt: 2380 Z-score: 1305.8 bits: 250.6 E(85289): 5.4e-66
Smith-Waterman score: 2380; 100.0% identity (100.0% similar) in 336 aa overlap (52-387:107-442)
30 40 50 60 70 80
pF1KB8 DNLYPEEIPSALNLFSGSSDSVVHYNQMATENVMDIGLTNEKPNPELSYSGSFQPAPGNK
::::::::::::::::::::::::::::::
XP_005 GSETTCSCSYLPAPPREEQQCFSRARACVCENVMDIGLTNEKPNPELSYSGSFQPAPGNK
80 90 100 110 120 130
90 100 110 120 130 140
pF1KB8 TVTYLGKFAFDSPSNWCQDNIISLMSAGILGVPPASGALSTQTSTASMVQPPQGDVEAMY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TVTYLGKFAFDSPSNWCQDNIISLMSAGILGVPPASGALSTQTSTASMVQPPQGDVEAMY
140 150 160 170 180 190
150 160 170 180 190 200
pF1KB8 PALPPYSNCGDLYSEPVSFHDPQGNPGLAYSPQDYQSAKPALDSNLFPMIPDYNLYHHPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PALPPYSNCGDLYSEPVSFHDPQGNPGLAYSPQDYQSAKPALDSNLFPMIPDYNLYHHPN
200 210 220 230 240 250
210 220 230 240 250 260
pF1KB8 DMGSIPEHKPFQGMDPIRVNPPPITPLETIKAFKDKQIHPGFGSLPQPPLTLKPIRPRKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DMGSIPEHKPFQGMDPIRVNPPPITPLETIKAFKDKQIHPGFGSLPQPPLTLKPIRPRKY
260 270 280 290 300 310
270 280 290 300 310 320
pF1KB8 PNRPSKTPLHERPHACPAEGCDRRFSRSDELTRHLRIHTGHKPFQCRICMRSFSRSDHLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PNRPSKTPLHERPHACPAEGCDRRFSRSDELTRHLRIHTGHKPFQCRICMRSFSRSDHLT
320 330 340 350 360 370
330 340 350 360 370 380
pF1KB8 THIRTHTGEKPFACEFCGRKFARSDERKRHAKIHLKQKEKKAEKGGAPSASSAPPVSLAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 THIRTHTGEKPFACEFCGRKFARSDERKRHAKIHLKQKEKKAEKGGAPSASSAPPVSLAP
380 390 400 410 420 430
pF1KB8 VVTTCA
::::::
XP_005 VVTTCA
440
>>NP_001186810 (OMIM: 602419) early growth response prot (333 aa)
initn: 2362 init1: 2362 opt: 2362 Z-score: 1297.6 bits: 248.7 E(85289): 1.5e-65
Smith-Waterman score: 2362; 100.0% identity (100.0% similar) in 333 aa overlap (55-387:1-333)
30 40 50 60 70 80
pF1KB8 YPEEIPSALNLFSGSSDSVVHYNQMATENVMDIGLTNEKPNPELSYSGSFQPAPGNKTVT
::::::::::::::::::::::::::::::
NP_001 MDIGLTNEKPNPELSYSGSFQPAPGNKTVT
10 20 30
90 100 110 120 130 140
pF1KB8 YLGKFAFDSPSNWCQDNIISLMSAGILGVPPASGALSTQTSTASMVQPPQGDVEAMYPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YLGKFAFDSPSNWCQDNIISLMSAGILGVPPASGALSTQTSTASMVQPPQGDVEAMYPAL
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB8 PPYSNCGDLYSEPVSFHDPQGNPGLAYSPQDYQSAKPALDSNLFPMIPDYNLYHHPNDMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPYSNCGDLYSEPVSFHDPQGNPGLAYSPQDYQSAKPALDSNLFPMIPDYNLYHHPNDMG
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB8 SIPEHKPFQGMDPIRVNPPPITPLETIKAFKDKQIHPGFGSLPQPPLTLKPIRPRKYPNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SIPEHKPFQGMDPIRVNPPPITPLETIKAFKDKQIHPGFGSLPQPPLTLKPIRPRKYPNR
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB8 PSKTPLHERPHACPAEGCDRRFSRSDELTRHLRIHTGHKPFQCRICMRSFSRSDHLTTHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSKTPLHERPHACPAEGCDRRFSRSDELTRHLRIHTGHKPFQCRICMRSFSRSDHLTTHI
220 230 240 250 260 270
330 340 350 360 370 380
pF1KB8 RTHTGEKPFACEFCGRKFARSDERKRHAKIHLKQKEKKAEKGGAPSASSAPPVSLAPVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RTHTGEKPFACEFCGRKFARSDERKRHAKIHLKQKEKKAEKGGAPSASSAPPVSLAPVVT
280 290 300 310 320 330
pF1KB8 TCA
:::
NP_001 TCA
>>NP_001955 (OMIM: 128990) early growth response protein (543 aa)
initn: 1043 init1: 716 opt: 968 Z-score: 545.4 bits: 110.2 E(85289): 1.2e-23
Smith-Waterman score: 1025; 48.7% identity (70.0% similar) in 380 aa overlap (31-385:81-449)
10 20 30 40 50
pF1KB8 MTGKLAEKLPVTMSSLLNQLPDNLYPEEIPSALNLFSGSSDSVVH-YNQMATENVMDIGL
:. . :. ..:. . :.....:. ::.:
NP_001 AAGAPEGSGSNSSSSSSGGGGGGGGGSNSSSSSSTFNPQADTGEQPYEHLTAESFPDISL
60 70 80 90 100 110
60 70 80 90 100 110
pF1KB8 TNEKPNPELSYSGSFQPAPGNKTVTYLGKFAFDSPSN-----WCQDNIISLMSAGILGV-
.::: : :: .. : .:: :.:... : : . ..::.: :....
NP_001 NNEKVLVETSYPSQTTRLP---PITYTGRFSLEPAPNSGNTLW-PEPLFSLVS-GLVSMT
120 130 140 150 160
120 130 140 150 160
pF1KB8 -PPASG--ALSTQTSTASMVQ-PP------QGDVEAMYPALPPY-SNCGDLYSEPVSFHD
::::. : : .:.:: : :: ..: .: : : . . :.. :: :
NP_001 NPPASSSSAPSPAASSASASQSPPLSCAVPSNDSSPIYSAAPTFPTPNTDIFPEPQSQAF
170 180 190 200 210 220
170 180 190 200 210
pF1KB8 PQGNPGLA--YSPQDYQSAKPALDSNLFPMIPDYNLYHHPNDMG-SIPEHKPFQGMDPIR
: :. : : : : : .:: ... :::::: . .. .:.: . :..:::::.. :
NP_001 P-GSAGTALQYPPPAYPAAKGGFQ---VPMIPDYLFPQQQGDLGLGTPDQKPFQGLES-R
230 240 250 260 270 280
220 230 240 250 260 270
pF1KB8 VNPPPITPLETIKAFKDKQIHPGFGSLP---QPPLTLKPIRPRKYPNRPSKTPLHERPHA
.. : .::: ::::: .. . .: : : .:: : ::::::::::: ::::.:
NP_001 TQQPSLTPLSTIKAFATQSGSQDLKALNTSYQSQL-IKPSRMRKYPNRPSKTPPHERPYA
290 300 310 320 330
280 290 300 310 320 330
pF1KB8 CPAEGCDRRFSRSDELTRHLRIHTGHKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFACE
::.:.::::::::::::::.:::::.::::::::::.::::::::::::::::::::::.
NP_001 CPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD
340 350 360 370 380 390
340 350 360 370 380
pF1KB8 FCGRKFARSDERKRHAKIHLKQKEKKAEKGG-APSASSAPPVSLAPVVTTCA
.::::::::::::::.::::.::.:::.:. : ::.:. .::.:.
NP_001 ICGRKFARSDERKRHTKIHLRQKDKKADKSVVASSATSSLSSYPSPVATSYPSPVTTSYP
400 410 420 430 440 450
NP_001 SPATTSYPSPVPTSFSSPGSSTYPSPVHSGFPSPSVATTYSSVPPAFPAQVSSFPSSAVT
460 470 480 490 500 510
>>NP_001129651 (OMIM: 129010,145900,605253,607678) E3 SU (426 aa)
initn: 1136 init1: 731 opt: 768 Z-score: 439.2 bits: 90.2 E(85289): 1e-17
Smith-Waterman score: 1124; 51.1% identity (68.7% similar) in 403 aa overlap (47-387:2-394)
20 30 40 50 60 70
pF1KB8 LNQLPDNLYPEEIPSALNLFSGSSDSVVHYNQMATENVMDIGLTNEKPNPELSYSGSFQP
: .: .....: .:.:: . .: : .:: :
NP_001 MNGVAGDGMINIDMTGEKRSLDLPYPSSFAP
10 20 30
80 90 100 110 120
pF1KB8 --APGNKTVTYLGKFAFDS--PSNWCQ-DNIISLMSAGIL-GVP-PASGALSTQTSTAS-
:: :.: ::.:::..: :. : ..::...::::: :: ::: . :.....::
NP_001 VSAPRNQTFTYMGKFSIDPQYPGASCYPEGIINIVSAGILQGVTSPASTTASSSVTSASP
40 50 60 70 80 90
130 140 150 160 170
pF1KB8 --MVQPPQG---------DVEAMY---PALPPYSNC-GDLYSEPVSFHDP---QGNPGLA
.. : : :.. .: : ::::.: ::::..: .: . . . .::
NP_001 NPLATGPLGVCTMSQTQPDLDHLYSPPPPPPPYSGCAGDLYQDPSAFLSAATTSTSSSLA
100 110 120 130 140 150
180 190 200 210 220
pF1KB8 YSPQ-DYQSAKPALDSNLFPMIPDYNLYHHPN----DM-GSI-PEHKPFQ-GMDPIRVNP
: : .: : ::: : .:::::::: . :. :. :. :..::: .: .:: :
NP_001 YPPPPSYPSPKPATDPGLFPMIPDYPGFF-PSQCQRDLHGTAGPDRKPFPCPLDTLRV-P
160 170 180 190 200
230 240 250
pF1KB8 PPITPLETIKAF-----KDKQIHPGF--GSL-PQPP-------------------LTLKP
::.::: ::. : . :: :: :. : : :.:
NP_001 PPLTPLSTIRNFTLGGPSAGVTGPGASGGSEGPRLPGSSSAAAAAAAAAAYNPHHLPLRP
210 220 230 240 250 260
260 270 280 290 300 310
pF1KB8 I-RPRKYPNRPSKTPLHERPHACPAEGCDRRFSRSDELTRHLRIHTGHKPFQCRICMRSF
: :::::::::::::.::::. :::::::::::::::::::.::::::::::::::::.:
NP_001 ILRPRKYPNRPSKTPVHERPYPCPAEGCDRRFSRSDELTRHIRIHTGHKPFQCRICMRNF
270 280 290 300 310 320
320 330 340 350 360 370
pF1KB8 SRSDHLTTHIRTHTGEKPFACEFCGRKFARSDERKRHAKIHLKQKEKKAEKGGAPSASSA
:::::::::::::::::::::..::::::::::::::.::::.:::.:. .::::: .
NP_001 SRSDHLTTHIRTHTGEKPFACDYCGRKFARSDERKRHTKIHLRQKERKS---SAPSAS-V
330 340 350 360 370 380
380
pF1KB8 PPVSLAPVVTTCA
: :: ...:.
NP_001 P----APSTASCSGGVQPGGTLCSSNSSSLGGGPLAPCSSRTRTP
390 400 410 420
>>NP_001307966 (OMIM: 129010,145900,605253,607678) E3 SU (426 aa)
initn: 1136 init1: 731 opt: 768 Z-score: 439.2 bits: 90.2 E(85289): 1e-17
Smith-Waterman score: 1124; 51.1% identity (68.7% similar) in 403 aa overlap (47-387:2-394)
20 30 40 50 60 70
pF1KB8 LNQLPDNLYPEEIPSALNLFSGSSDSVVHYNQMATENVMDIGLTNEKPNPELSYSGSFQP
: .: .....: .:.:: . .: : .:: :
NP_001 MNGVAGDGMINIDMTGEKRSLDLPYPSSFAP
10 20 30
80 90 100 110 120
pF1KB8 --APGNKTVTYLGKFAFDS--PSNWCQ-DNIISLMSAGIL-GVP-PASGALSTQTSTAS-
:: :.: ::.:::..: :. : ..::...::::: :: ::: . :.....::
NP_001 VSAPRNQTFTYMGKFSIDPQYPGASCYPEGIINIVSAGILQGVTSPASTTASSSVTSASP
40 50 60 70 80 90
130 140 150 160 170
pF1KB8 --MVQPPQG---------DVEAMY---PALPPYSNC-GDLYSEPVSFHDP---QGNPGLA
.. : : :.. .: : ::::.: ::::..: .: . . . .::
NP_001 NPLATGPLGVCTMSQTQPDLDHLYSPPPPPPPYSGCAGDLYQDPSAFLSAATTSTSSSLA
100 110 120 130 140 150
180 190 200 210 220
pF1KB8 YSPQ-DYQSAKPALDSNLFPMIPDYNLYHHPN----DM-GSI-PEHKPFQ-GMDPIRVNP
: : .: : ::: : .:::::::: . :. :. :. :..::: .: .:: :
NP_001 YPPPPSYPSPKPATDPGLFPMIPDYPGFF-PSQCQRDLHGTAGPDRKPFPCPLDTLRV-P
160 170 180 190 200
230 240 250
pF1KB8 PPITPLETIKAF-----KDKQIHPGF--GSL-PQPP-------------------LTLKP
::.::: ::. : . :: :: :. : : :.:
NP_001 PPLTPLSTIRNFTLGGPSAGVTGPGASGGSEGPRLPGSSSAAAAAAAAAAYNPHHLPLRP
210 220 230 240 250 260
260 270 280 290 300 310
pF1KB8 I-RPRKYPNRPSKTPLHERPHACPAEGCDRRFSRSDELTRHLRIHTGHKPFQCRICMRSF
: :::::::::::::.::::. :::::::::::::::::::.::::::::::::::::.:
NP_001 ILRPRKYPNRPSKTPVHERPYPCPAEGCDRRFSRSDELTRHIRIHTGHKPFQCRICMRNF
270 280 290 300 310 320
320 330 340 350 360 370
pF1KB8 SRSDHLTTHIRTHTGEKPFACEFCGRKFARSDERKRHAKIHLKQKEKKAEKGGAPSASSA
:::::::::::::::::::::..::::::::::::::.::::.:::.:. .::::: .
NP_001 SRSDHLTTHIRTHTGEKPFACDYCGRKFARSDERKRHTKIHLRQKERKS---SAPSAS-V
330 340 350 360 370 380
380
pF1KB8 PPVSLAPVVTTCA
: :: ...:.
NP_001 P----APSTASCSGGVQPGGTLCSSNSSSLGGGPLAPCSSRTRTP
390 400 410 420
>>NP_001129649 (OMIM: 129010,145900,605253,607678) E3 SU (476 aa)
initn: 1228 init1: 731 opt: 768 Z-score: 438.6 bits: 90.2 E(85289): 1.1e-17
Smith-Waterman score: 1125; 50.9% identity (68.9% similar) in 405 aa overlap (45-387:50-444)
20 30 40 50 60 70
pF1KB8 SLLNQLPDNLYPEEIPSALNLFSGSSDSVVHYNQMATENVMDIGLTNEKPNPELSYSGSF
..: .: .....: .:.:: . .: : .::
NP_001 QLSDNIYPVEDLAATSVTIFPNAELGGPFDQMNGVAGDGMINIDMTGEKRSLDLPYPSSF
20 30 40 50 60 70
80 90 100 110 120
pF1KB8 QP--APGNKTVTYLGKFAFDS--PSNWCQ-DNIISLMSAGIL-GVP-PASGALSTQTSTA
: :: :.: ::.:::..: :. : ..::...::::: :: ::: . :.....:
NP_001 APVSAPRNQTFTYMGKFSIDPQYPGASCYPEGIINIVSAGILQGVTSPASTTASSSVTSA
80 90 100 110 120 130
130 140 150 160
pF1KB8 S---MVQPPQG---------DVEAMY---PALPPYSNC-GDLYSEPVSFHDP---QGNPG
: .. : : :.. .: : ::::.: ::::..: .: . . . .
NP_001 SPNPLATGPLGVCTMSQTQPDLDHLYSPPPPPPPYSGCAGDLYQDPSAFLSAATTSTSSS
140 150 160 170 180 190
170 180 190 200 210 220
pF1KB8 LAYSPQ-DYQSAKPALDSNLFPMIPDYNLYHHPN----DM-GSI-PEHKPFQ-GMDPIRV
::: : .: : ::: : .:::::::: . :. :. :. :..::: .: .::
NP_001 LAYPPPPSYPSPKPATDPGLFPMIPDYPGFF-PSQCQRDLHGTAGPDRKPFPCPLDTLRV
200 210 220 230 240 250
230 240 250
pF1KB8 NPPPITPLETIKAF-----KDKQIHPGF--GSL-PQPP-------------------LTL
:::.::: ::. : . :: :: :. : : :
NP_001 -PPPLTPLSTIRNFTLGGPSAGVTGPGASGGSEGPRLPGSSSAAAAAAAAAAYNPHHLPL
260 270 280 290 300 310
260 270 280 290 300 310
pF1KB8 KPI-RPRKYPNRPSKTPLHERPHACPAEGCDRRFSRSDELTRHLRIHTGHKPFQCRICMR
.:: :::::::::::::.::::. :::::::::::::::::::.::::::::::::::::
NP_001 RPILRPRKYPNRPSKTPVHERPYPCPAEGCDRRFSRSDELTRHIRIHTGHKPFQCRICMR
320 330 340 350 360 370
320 330 340 350 360 370
pF1KB8 SFSRSDHLTTHIRTHTGEKPFACEFCGRKFARSDERKRHAKIHLKQKEKKAEKGGAPSAS
.::::::::::::::::::::::..::::::::::::::.::::.:::.:. .:::::
NP_001 NFSRSDHLTTHIRTHTGEKPFACDYCGRKFARSDERKRHTKIHLRQKERKS---SAPSAS
380 390 400 410 420 430
380
pF1KB8 SAPPVSLAPVVTTCA
.: :: ...:.
NP_001 -VP----APSTASCSGGVQPGGTLCSSNSSSLGGGPLAPCSSRTRTP
440 450 460 470
387 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 08:28:11 2016 done: Sat Nov 5 08:28:12 2016
Total Scan time: 8.170 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]