FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4161, 603 aa 1>>>pF1KE4161 603 - 603 aa - 603 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.2697+/-0.000776; mu= 3.8715+/- 0.047 mean_var=252.7196+/-51.318, 0's: 0 Z-trim(117.5): 6 B-trim: 178 in 1/52 Lambda= 0.080678 statistics sampled from 18233 (18238) to 18233 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.822), E-opt: 0.2 (0.56), width: 16 Scan time: 4.030 The best scores are: opt bits E(32554) CCDS46116.1 FBXO46 gene_id:23403|Hs108|chr19 ( 603) 4324 516.1 5.3e-146 CCDS32086.1 FBXO34 gene_id:55030|Hs108|chr14 ( 711) 756 100.8 6.2e-21 >>CCDS46116.1 FBXO46 gene_id:23403|Hs108|chr19 (603 aa) initn: 4324 init1: 4324 opt: 4324 Z-score: 2734.7 bits: 516.1 E(32554): 5.3e-146 Smith-Waterman score: 4324; 100.0% identity (100.0% similar) in 603 aa overlap (1-603:1-603) 10 20 30 40 50 60 pF1KE4 MDRGSLLPFQLWCPRPFGTYSQNQPRPPSAALKPSACPEPGGGAEPDHGPAHSENTPPAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MDRGSLLPFQLWCPRPFGTYSQNQPRPPSAALKPSACPEPGGGAEPDHGPAHSENTPPAL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 ATEVPASQPAPLLSAAAAGDEGRVLLDTWYVIKPGNTKEKVAFFVAHQCGGGSRASSMKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 ATEVPASQPAPLLSAAAAGDEGRVLLDTWYVIKPGNTKEKVAFFVAHQCGGGSRASSMKV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 KGHWGSDSSKAKRRRRCLDPTKAPPDPGGREGPPAAEEGPASAGEDVDLLSVAEMVALVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 KGHWGSDSSKAKRRRRCLDPTKAPPDPGGREGPPAAEEGPASAGEDVDLLSVAEMVALVE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 QRAALALQSYPRPTTPAPVVFVSAEQGGPAKGVGSERRSGGGDCSRVAEAVAHFEAQRDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 QRAALALQSYPRPTTPAPVVFVSAEQGGPAKGVGSERRSGGGDCSRVAEAVAHFEAQRDS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 PPTKGLRKEERPGPGPGEVRIAFRISNGREPRAPDSGLPSGGGGRPGCAYPGSPGPGARA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 PPTKGLRKEERPGPGPGEVRIAFRISNGREPRAPDSGLPSGGGGRPGCAYPGSPGPGARA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 KDKITCDLYQLISPSRDALPSNVEFLLARADEASEGDSPAPARPEDTPPAPPPPPARDCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 KDKITCDLYQLISPSRDALPSNVEFLLARADEASEGDSPAPARPEDTPPAPPPPPARDCG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 ASGFHVDVVVTGVVDECIFFGKDGTKNVKEETVCLTVSPEEPPPPGQLFFLQNRGPDGPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 ASGFHVDVVVTGVVDECIFFGKDGTKNVKEETVCLTVSPEEPPPPGQLFFLQNRGPDGPP 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 EPPPADSPATAPGPDDAEGTADTSLCRLYRHVSHDFLEIRFKIQRLLEPRQYMLLLPEHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 EPPPADSPATAPGPDDAEGTADTSLCRLYRHVSHDFLEIRFKIQRLLEPRQYMLLLPEHV 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE4 LVKIFSFLPTRALAALKCTCHHFKGIIEAFGVRATDSRWSRDPLYRDDPCKQCRKRYEKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LVKIFSFLPTRALAALKCTCHHFKGIIEAFGVRATDSRWSRDPLYRDDPCKQCRKRYEKG 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE4 DVSLCRWHPKPYHHDLPYGRSYWMCCRRADRETPGCRLGLHDNNWVLPCNGPGGGRAGRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 DVSLCRWHPKPYHHDLPYGRSYWMCCRRADRETPGCRLGLHDNNWVLPCNGPGGGRAGRE 550 560 570 580 590 600 pF1KE4 EGR ::: CCDS46 EGR >>CCDS32086.1 FBXO34 gene_id:55030|Hs108|chr14 (711 aa) initn: 1014 init1: 747 opt: 756 Z-score: 489.3 bits: 100.8 E(32554): 6.2e-21 Smith-Waterman score: 982; 34.4% identity (54.8% similar) in 633 aa overlap (53-590:74-692) 30 40 50 60 70 80 pF1KE4 NQPRPPSAALKPSACPEPGGGAEPDHGPAHSENTPPALATEVPASQPAPLLSAAAAGDEG : ..: . .: ... :: . . .:: CCDS32 TSSVFPSASLGKASSRKPFGILSPNVLCSMSGKSPVESSLNVKTKKNAPSATIHQGEEEG 50 60 70 80 90 100 90 100 110 120 130 140 pF1KE4 RVLLDTWYVIKPGNTKEKVAFFVAHQCGGGSRASSMKVKGHWGSDSSKAKRRRRCLDPTK :: : :.::::::::.:::..:::. .: .:::.:. : :. .:::.. : : CCDS32 P--LDIWAVVKPGNTKEKIAFFASHQCS--NRIGSMKIKSSWDIDGRATKRRKKSGDLKK 110 120 130 140 150 150 160 170 180 pF1KE4 AP---------------PDPGGREGPPAAEEGPASAGEDVDL---LSVAEMVALVEQRAA : :.: . . . ...:. : ::: .:::..::::. CCDS32 AKVQVERMREVNSRCYQPEPFACGIEHCSVHYVSDSGDGVYAGRPLSVIQMVAFLEQRAS 160 170 180 190 200 210 190 200 210 220 230 240 pF1KE4 LALQSYPRPTT--PAPVVFVSAEQGGPAKGVGSERRSGGGDCSRVAEAVAHFEAQRDSPP : : . : :: : : . .: :: :: :. : : . .: .. .: : CCDS32 ALLASCSKNCTNSPAIVRFSGQSRGVPAV---SESYSAPGACEEPTERGNLEVGEPQSEP 220 230 240 250 260 270 250 260 270 pF1KE4 TK------GLRKE--ERPG---PGPGEVRIAFRISNGR----------EPR-------AP .. :..: .: : :: .:: . :: : . :: CCDS32 VRVLDMVAKLESECLKRQGQREPGSLSRNNSFRRNVGRVLLANSTQADEGKTKKGVLEAP 280 290 300 310 320 330 280 290 300 310 320 330 pF1KE4 DSGLPSGGGGRPGCAYPGSPGPGARAKDKITCDLYQLISPSRDALPSNVEFLLARAD--- :. . :. :. :. . .:. : : ::..: : . :. CCDS32 DTQVNPVGSVSVDCG-PSRADRCSPKEDQAWDGASQDCPP----LPAGVSFHIDSAELEP 340 350 360 370 380 390 340 350 360 370 380 pF1KE4 ---EASEGDSPAPARPEDTPPAPPPPPARDCGASGFHVDVVVTGVVDECIFFGKDGTKNV : .... .. : . : :: . .:.: . . ... . CCDS32 GSQTAVKNSNRYDVEMTDELVGLPFSSHTYSQASELPTDAVDCMSRELVSLTSRNPDQ-- 400 410 420 430 440 390 400 410 420 pF1KE4 KEETVCLTVS--------PE-----EPPPPGQLFFL---------QNRGPDGPPEPPPAD ..:..:.... : : : ::.:::: .. . . : :. CCDS32 RKESLCISITVSKVDKDQPSILNSCEDPVPGMLFFLPPGQHLSDYSQLNESTTKESSEAS 450 460 470 480 490 500 430 440 450 460 pF1KE4 SPATAPGPDDAE----GTAD----------TSLCRLY-----RHVSHDFLEIRFKIQRLL . : : :.: :.:. ..: : ..::::::: :::::.:: CCDS32 QLEDAAGGDSASEEKSGSAEPFVLPASSVESTLPVLEASSWKKQVSHDFLETRFKIQQLL 510 520 530 540 550 560 470 480 490 500 510 520 pF1KE4 EPRQYMLLLPEHVLVKIFSFLPTRALAALKCTCHHFKGIIEAFGVRATDSRWSRDPLYRD ::.::: .::.:..:::: .:::..:.:::::: .:: ::: ...: .:::: ::: ::. CCDS32 EPQQYMAFLPHHIMVKIFRLLPTKSLVALKCTCCYFKFIIEYYNIRPADSRWVRDPRYRE 570 580 590 600 610 620 530 540 550 560 570 580 pF1KE4 DPCKQCRKRYEKGDVSLCRWHPKPYHHDLPYGRSYWMCCRRADRETPGCRLGLHDNNWVL ::::::.:.: :::::::::::::: . :::: .:::::.:... :::.::::::.:: CCDS32 DPCKQCKKKYVKGDVSLCRWHPKPYCQALPYGPGYWMCCHRSQKGFPGCKLGLHDNHWVP 630 640 650 660 670 680 590 600 pF1KE4 PCNGPGGGRAGREEGR :. CCDS32 ACHSFNRAIHKKAKGTEAEEEY 690 700 710 603 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 15:12:20 2016 done: Mon Nov 7 15:12:20 2016 Total Scan time: 4.030 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]