Result of FASTA (omim) for
pFN21AE3541
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3541, 295 aa
1>>>pF1KE3541 295 - 295 aa - 295 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4102+/-0.000329; mu= 14.8809+/- 0.020
mean_var=69.2902+/-13.556, 0's: 0 Z-trim(116.6): 72 B-trim: 767 in 2/52
Lambda= 0.154077
statistics sampled from 27850 (27926) to 27850 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.709), E-opt: 0.2 (0.327), width: 16
Scan time: 7.550
The best scores are: opt bits E(85289)
NP_775912 (OMIM: 611123) ephrin type-A receptor 10 ( 295) 2045 463.3 2.6e-130
NP_001092909 (OMIM: 611123) ephrin type-A receptor (1008) 1966 446.0 1.4e-124
NP_001275559 (OMIM: 602190) ephrin type-A receptor ( 279) 1215 278.8 8.5e-75
XP_016865855 (OMIM: 602190) PREDICTED: ephrin type ( 442) 1216 279.1 1.1e-74
XP_005248728 (OMIM: 602190) PREDICTED: ephrin type ( 610) 1216 279.2 1.4e-74
XP_016865854 (OMIM: 602190) PREDICTED: ephrin type ( 989) 1216 279.3 2.1e-74
NP_001275558 (OMIM: 602190) ephrin type-A receptor ( 993) 1216 279.3 2.1e-74
XP_005248726 (OMIM: 602190) PREDICTED: ephrin type ( 994) 1216 279.3 2.1e-74
NP_004431 (OMIM: 602190) ephrin type-A receptor 7 ( 998) 1216 279.3 2.1e-74
NP_872585 (OMIM: 179611) ephrin type-A receptor 3 ( 539) 1095 252.3 1.6e-66
XP_005264773 (OMIM: 179611) PREDICTED: ephrin type ( 918) 1095 252.4 2.4e-66
XP_005264772 (OMIM: 179611) PREDICTED: ephrin type ( 982) 1095 252.4 2.6e-66
NP_005224 (OMIM: 179611) ephrin type-A receptor 3 ( 983) 1095 252.4 2.6e-66
XP_005246431 (OMIM: 602188) PREDICTED: ephrin type ( 949) 1087 250.6 8.6e-66
NP_001291465 (OMIM: 602188) ephrin type-A receptor ( 986) 1087 250.6 8.9e-66
NP_004429 (OMIM: 602188) ephrin type-A receptor 4 ( 986) 1087 250.6 8.9e-66
XP_016863370 (OMIM: 600004) PREDICTED: ephrin type ( 817) 1072 247.2 7.7e-65
XP_016863369 (OMIM: 600004) PREDICTED: ephrin type ( 852) 1072 247.3 8e-65
XP_016863368 (OMIM: 600004) PREDICTED: ephrin type ( 869) 1072 247.3 8.1e-65
XP_005265710 (OMIM: 600004) PREDICTED: ephrin type ( 874) 1072 247.3 8.1e-65
XP_016863367 (OMIM: 600004) PREDICTED: ephrin type ( 904) 1072 247.3 8.4e-65
XP_011530037 (OMIM: 600004) PREDICTED: ephrin type ( 926) 1072 247.3 8.5e-65
XP_011511008 (OMIM: 600066) PREDICTED: ephrin type ( 373) 1067 245.9 8.6e-65
NP_001268696 (OMIM: 600004) ephrin type-A receptor (1004) 1072 247.3 9.1e-65
NP_872272 (OMIM: 600004) ephrin type-A receptor 5 (1015) 1072 247.3 9.2e-65
NP_001268695 (OMIM: 600004) ephrin type-A receptor (1016) 1072 247.3 9.2e-65
NP_004430 (OMIM: 600004) ephrin type-A receptor 5 (1037) 1072 247.3 9.4e-65
NP_001268694 (OMIM: 600004) ephrin type-A receptor (1038) 1072 247.3 9.4e-65
NP_001265230 (OMIM: 600066) ephrin type-A receptor ( 379) 1063 245.1 1.6e-64
XP_011511007 (OMIM: 600066) PREDICTED: ephrin type ( 389) 1059 244.2 3.1e-64
XP_011511009 (OMIM: 600066) PREDICTED: ephrin type ( 373) 1055 243.3 5.5e-64
XP_016861708 (OMIM: 600066) PREDICTED: ephrin type ( 537) 1055 243.4 7.4e-64
XP_016861699 (OMIM: 600066) PREDICTED: ephrin type (1104) 1055 243.5 1.4e-63
NP_001073917 (OMIM: 600066) ephrin type-A receptor (1130) 1055 243.5 1.4e-63
XP_006713655 (OMIM: 600066) PREDICTED: ephrin type (1146) 1055 243.5 1.4e-63
NP_001305690 (OMIM: 600004) ephrin type-A receptor ( 969) 1022 236.2 2e-61
NP_001006944 (OMIM: 176945) ephrin type-A receptor ( 495) 1017 234.9 2.4e-61
NP_065387 (OMIM: 176945) ephrin type-A receptor 8 (1005) 1017 235.1 4.4e-61
NP_001291466 (OMIM: 602188) ephrin type-A receptor ( 935) 976 225.9 2.3e-58
XP_016861701 (OMIM: 600066) PREDICTED: ephrin type (1012) 957 221.7 4.6e-57
XP_016861700 (OMIM: 600066) PREDICTED: ephrin type (1018) 956 221.5 5.3e-57
XP_016856026 (OMIM: 116600,176946) PREDICTED: ephr ( 577) 939 217.6 4.6e-56
NP_004432 (OMIM: 600600) ephrin type-B receptor 1 ( 984) 940 217.9 6.1e-56
XP_016861355 (OMIM: 600600) PREDICTED: ephrin type (1038) 940 218.0 6.4e-56
NP_004422 (OMIM: 116600,176946) ephrin type-A rece ( 976) 939 217.7 7.1e-56
XP_016861702 (OMIM: 600066) PREDICTED: ephrin type ( 990) 936 217.1 1.1e-55
XP_016861356 (OMIM: 600600) PREDICTED: ephrin type (1032) 935 216.8 1.4e-55
XP_016856023 (OMIM: 116600,176946) PREDICTED: ephr ( 973) 932 216.2 2.1e-55
XP_016861357 (OMIM: 600600) PREDICTED: ephrin type (1016) 928 215.3 4e-55
XP_016856024 (OMIM: 116600,176946) PREDICTED: ephr ( 965) 924 214.4 7.1e-55
>>NP_775912 (OMIM: 611123) ephrin type-A receptor 10 iso (295 aa)
initn: 2045 init1: 2045 opt: 2045 Z-score: 2460.6 bits: 463.3 E(85289): 2.6e-130
Smith-Waterman score: 2045; 99.7% identity (100.0% similar) in 295 aa overlap (1-295:1-295)
10 20 30 40 50 60
pF1KE3 METCAGPHPLRLFLCRMQLCLALLLGPWRPGTAEEVILLDSKASQAELGWTALPSNGWEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 METCAGPHPLRLFLCRMQLCLALLLGPWRPGTAEEVILLDSKASQAELGWTALPSNGWEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 ISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIFVELQFTLRDCSSIPGAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 ISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIFVELQFTLRDCSSIPGAAG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 TCKETFNVYYLETEADLGRGRPRLGGSRPRKIDTIAADESFTQGDLGERKMKLNTEVREI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 TCKETFNVYYLETEADLGRGRPRLGGSRPRKIDTIAADESFTQGDLGERKMKLNTEVREI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 GPLSRRGFHLAFQDVGACVALVSVRVYYKQCRATVRGLATFPATAAESAFSTLVEVAGTC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 GPLSRRGFHLAFQDVGACVALVSVRVYYKQCRATVRGLATFPATAAESAFSTLVEVAGTC
190 200 210 220 230 240
250 260 270 280 290
pF1KE3 VAHSEGEPGSPPRMHCGADGEWLVPVGRCSCSAGFQERGDICEGIQLAGGRGVGV
::::::::::::::::::::::::::::::::::::::::.::::::::::::::
NP_775 VAHSEGEPGSPPRMHCGADGEWLVPVGRCSCSAGFQERGDFCEGIQLAGGRGVGV
250 260 270 280 290
>>NP_001092909 (OMIM: 611123) ephrin type-A receptor 10 (1008 aa)
initn: 1966 init1: 1966 opt: 1966 Z-score: 2357.7 bits: 446.0 E(85289): 1.4e-124
Smith-Waterman score: 1966; 99.6% identity (100.0% similar) in 283 aa overlap (1-283:1-283)
10 20 30 40 50 60
pF1KE3 METCAGPHPLRLFLCRMQLCLALLLGPWRPGTAEEVILLDSKASQAELGWTALPSNGWEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 METCAGPHPLRLFLCRMQLCLALLLGPWRPGTAEEVILLDSKASQAELGWTALPSNGWEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 ISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIFVELQFTLRDCSSIPGAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIFVELQFTLRDCSSIPGAAG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 TCKETFNVYYLETEADLGRGRPRLGGSRPRKIDTIAADESFTQGDLGERKMKLNTEVREI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TCKETFNVYYLETEADLGRGRPRLGGSRPRKIDTIAADESFTQGDLGERKMKLNTEVREI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 GPLSRRGFHLAFQDVGACVALVSVRVYYKQCRATVRGLATFPATAAESAFSTLVEVAGTC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPLSRRGFHLAFQDVGACVALVSVRVYYKQCRATVRGLATFPATAAESAFSTLVEVAGTC
190 200 210 220 230 240
250 260 270 280 290
pF1KE3 VAHSEGEPGSPPRMHCGADGEWLVPVGRCSCSAGFQERGDICEGIQLAGGRGVGV
::::::::::::::::::::::::::::::::::::::::.::
NP_001 VAHSEGEPGSPPRMHCGADGEWLVPVGRCSCSAGFQERGDFCEACPPGFYKVSPRRPLCS
250 260 270 280 290 300
NP_001 PCPEHSRALENASTFCVCQDSYARSPTDPPSASCTRPPSAPRDLQYSLSRSPLVLRLRWL
310 320 330 340 350 360
>>NP_001275559 (OMIM: 602190) ephrin type-A receptor 7 i (279 aa)
initn: 1219 init1: 682 opt: 1215 Z-score: 1463.9 bits: 278.8 E(85289): 8.5e-75
Smith-Waterman score: 1215; 64.3% identity (82.7% similar) in 277 aa overlap (8-283:7-277)
10 20 30 40 50 60
pF1KE3 METCAGPHPLRLFLCRMQLCLALLLGPWRPGTAEEVILLDSKASQAELGWTALPSNGWEE
.: ..:: . : : . .:.::.::::::.:.:: : . : :::::
NP_001 MVFQTRYPSWIILCYIWLLRFAHTG--EAQAAKEVLLLDSKAQQTELEWISSPPNGWEE
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 ISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIFVELQFTLRDCSSIPGAAG
:::.::. ::::::::.:.::::.:::.:.:::.: .:::::::.::::::.:.::. :
NP_001 ISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLG
60 70 80 90 100 110
130 140 150 160 170
pF1KE3 TCKETFNVYYLETEADLGRG-RPRLGGSRPRKIDTIAADESFTQGDLGERKMKLNTEVRE
:::::::.:: ::. : ::. : : :::::::::::::::::::::::::::::
NP_001 TCKETFNLYYYETDYDTGRNIRENLY----VKIDTIAADESFTQGDLGERKMKLNTEVRE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE3 IGPLSRRGFHLAFQDVGACVALVSVRVYYKQCRATVRGLATFPATAAESAFSTLVEVAGT
:::::..::.:::::::::.:::::.::::.: . ...:: :: :.. : ::.:::: ::
NP_001 IGPLSKKGFYLAFQDVGACIALVSVKVYYKKCWSIIENLAIFPDTVTGSEFSSLVEVRGT
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE3 CVAHSEGEPGSPPRMHCGADGEWLVPVGRCSCSAGFQERGDICEGIQLAGGRGVGV
::. .: : . :::::.:.::::::.:.: :.::.:..:: ::
NP_001 CVSSAEEEAENAPRMHCSAEGEWLVPIGKCICKAGYQQKGDTCERK
240 250 260 270
>>XP_016865855 (OMIM: 602190) PREDICTED: ephrin type-A r (442 aa)
initn: 1219 init1: 682 opt: 1216 Z-score: 1462.1 bits: 279.1 E(85289): 1.1e-74
Smith-Waterman score: 1216; 63.3% identity (81.1% similar) in 286 aa overlap (8-292:7-282)
10 20 30 40 50 60
pF1KE3 METCAGPHPLRLFLCRMQLCLALLLGPWRPGTAEEVILLDSKASQAELGWTALPSNGWEE
.: ..:: . : : . .:.::.::::::.:.:: : . : :::::
XP_016 MVFQTRYPSWIILCYIWLLRFAHTG--EAQAAKEVLLLDSKAQQTELEWISSPPNGWEE
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 ISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIFVELQFTLRDCSSIPGAAG
:::.::. ::::::::.:.::::.:::.:.:::.: .:::::::.::::::.:.::. :
XP_016 ISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLG
60 70 80 90 100 110
130 140 150 160 170
pF1KE3 TCKETFNVYYLETEADLGRG-RPRLGGSRPRKIDTIAADESFTQGDLGERKMKLNTEVRE
:::::::.:: ::. : ::. : : :::::::::::::::::::::::::::::
XP_016 TCKETFNLYYYETDYDTGRNIRENLY----VKIDTIAADESFTQGDLGERKMKLNTEVRE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE3 IGPLSRRGFHLAFQDVGACVALVSVRVYYKQCRATVRGLATFPATAAESAFSTLVEVAGT
:::::..::.:::::::::.:::::.::::.: . ...:: :: :.. : ::.:::: ::
XP_016 IGPLSKKGFYLAFQDVGACIALVSVKVYYKKCWSIIENLAIFPDTVTGSEFSSLVEVRGT
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE3 CVAHSEGEPGSPPRMHCGADGEWLVPVGRCSCSAGFQERGDICEGIQLAGGRGVGV
::. .: : . :::::.:.::::::.:.: :.::.:..:: :: :::
XP_016 CVSSAEEEAENAPRMHCSAEGEWLVPIGKCICKAGYQQKGDTCE----PCGRGFYKSSSQ
240 250 260 270 280
XP_016 DLQCSRCPTHSFSDKEGSSRCECEDGYYRAPSDPPYVACTRPPSAPQNLIFNINQTTVSL
290 300 310 320 330 340
>>XP_005248728 (OMIM: 602190) PREDICTED: ephrin type-A r (610 aa)
initn: 1219 init1: 682 opt: 1216 Z-score: 1460.0 bits: 279.2 E(85289): 1.4e-74
Smith-Waterman score: 1216; 63.3% identity (81.1% similar) in 286 aa overlap (8-292:7-282)
10 20 30 40 50 60
pF1KE3 METCAGPHPLRLFLCRMQLCLALLLGPWRPGTAEEVILLDSKASQAELGWTALPSNGWEE
.: ..:: . : : . .:.::.::::::.:.:: : . : :::::
XP_005 MVFQTRYPSWIILCYIWLLRFAHTG--EAQAAKEVLLLDSKAQQTELEWISSPPNGWEE
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 ISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIFVELQFTLRDCSSIPGAAG
:::.::. ::::::::.:.::::.:::.:.:::.: .:::::::.::::::.:.::. :
XP_005 ISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLG
60 70 80 90 100 110
130 140 150 160 170
pF1KE3 TCKETFNVYYLETEADLGRG-RPRLGGSRPRKIDTIAADESFTQGDLGERKMKLNTEVRE
:::::::.:: ::. : ::. : : :::::::::::::::::::::::::::::
XP_005 TCKETFNLYYYETDYDTGRNIRENLY----VKIDTIAADESFTQGDLGERKMKLNTEVRE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE3 IGPLSRRGFHLAFQDVGACVALVSVRVYYKQCRATVRGLATFPATAAESAFSTLVEVAGT
:::::..::.:::::::::.:::::.::::.: . ...:: :: :.. : ::.:::: ::
XP_005 IGPLSKKGFYLAFQDVGACIALVSVKVYYKKCWSIIENLAIFPDTVTGSEFSSLVEVRGT
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE3 CVAHSEGEPGSPPRMHCGADGEWLVPVGRCSCSAGFQERGDICEGIQLAGGRGVGV
::. .: : . :::::.:.::::::.:.: :.::.:..:: :: :::
XP_005 CVSSAEEEAENAPRMHCSAEGEWLVPIGKCICKAGYQQKGDTCE----PCGRGFYKSSSQ
240 250 260 270 280
XP_005 DLQCSRCPTHSFSDKEGSSRCECEDGYYRAPSDPPYVACTRPPSAPQNLIFNINQTTVSL
290 300 310 320 330 340
>>XP_016865854 (OMIM: 602190) PREDICTED: ephrin type-A r (989 aa)
initn: 1219 init1: 682 opt: 1216 Z-score: 1456.8 bits: 279.3 E(85289): 2.1e-74
Smith-Waterman score: 1216; 63.3% identity (81.1% similar) in 286 aa overlap (8-292:7-282)
10 20 30 40 50 60
pF1KE3 METCAGPHPLRLFLCRMQLCLALLLGPWRPGTAEEVILLDSKASQAELGWTALPSNGWEE
.: ..:: . : : . .:.::.::::::.:.:: : . : :::::
XP_016 MVFQTRYPSWIILCYIWLLRFAHTG--EAQAAKEVLLLDSKAQQTELEWISSPPNGWEE
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 ISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIFVELQFTLRDCSSIPGAAG
:::.::. ::::::::.:.::::.:::.:.:::.: .:::::::.::::::.:.::. :
XP_016 ISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLG
60 70 80 90 100 110
130 140 150 160 170
pF1KE3 TCKETFNVYYLETEADLGRG-RPRLGGSRPRKIDTIAADESFTQGDLGERKMKLNTEVRE
:::::::.:: ::. : ::. : : :::::::::::::::::::::::::::::
XP_016 TCKETFNLYYYETDYDTGRNIRENLY----VKIDTIAADESFTQGDLGERKMKLNTEVRE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE3 IGPLSRRGFHLAFQDVGACVALVSVRVYYKQCRATVRGLATFPATAAESAFSTLVEVAGT
:::::..::.:::::::::.:::::.::::.: . ...:: :: :.. : ::.:::: ::
XP_016 IGPLSKKGFYLAFQDVGACIALVSVKVYYKKCWSIIENLAIFPDTVTGSEFSSLVEVRGT
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE3 CVAHSEGEPGSPPRMHCGADGEWLVPVGRCSCSAGFQERGDICEGIQLAGGRGVGV
::. .: : . :::::.:.::::::.:.: :.::.:..:: :: :::
XP_016 CVSSAEEEAENAPRMHCSAEGEWLVPIGKCICKAGYQQKGDTCE----PCGRGFYKSSSQ
240 250 260 270 280
XP_016 DLQCSRCPTHSFSDKEGSSRCECEDGYYRAPSDPPYVACTRPPSAPQNLIFNINQTTVSL
290 300 310 320 330 340
>>NP_001275558 (OMIM: 602190) ephrin type-A receptor 7 i (993 aa)
initn: 1219 init1: 682 opt: 1216 Z-score: 1456.8 bits: 279.3 E(85289): 2.1e-74
Smith-Waterman score: 1216; 63.3% identity (81.1% similar) in 286 aa overlap (8-292:7-282)
10 20 30 40 50 60
pF1KE3 METCAGPHPLRLFLCRMQLCLALLLGPWRPGTAEEVILLDSKASQAELGWTALPSNGWEE
.: ..:: . : : . .:.::.::::::.:.:: : . : :::::
NP_001 MVFQTRYPSWIILCYIWLLRFAHTG--EAQAAKEVLLLDSKAQQTELEWISSPPNGWEE
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 ISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIFVELQFTLRDCSSIPGAAG
:::.::. ::::::::.:.::::.:::.:.:::.: .:::::::.::::::.:.::. :
NP_001 ISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLG
60 70 80 90 100 110
130 140 150 160 170
pF1KE3 TCKETFNVYYLETEADLGRG-RPRLGGSRPRKIDTIAADESFTQGDLGERKMKLNTEVRE
:::::::.:: ::. : ::. : : :::::::::::::::::::::::::::::
NP_001 TCKETFNLYYYETDYDTGRNIRENLY----VKIDTIAADESFTQGDLGERKMKLNTEVRE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE3 IGPLSRRGFHLAFQDVGACVALVSVRVYYKQCRATVRGLATFPATAAESAFSTLVEVAGT
:::::..::.:::::::::.:::::.::::.: . ...:: :: :.. : ::.:::: ::
NP_001 IGPLSKKGFYLAFQDVGACIALVSVKVYYKKCWSIIENLAIFPDTVTGSEFSSLVEVRGT
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE3 CVAHSEGEPGSPPRMHCGADGEWLVPVGRCSCSAGFQERGDICEGIQLAGGRGVGV
::. .: : . :::::.:.::::::.:.: :.::.:..:: :: :::
NP_001 CVSSAEEEAENAPRMHCSAEGEWLVPIGKCICKAGYQQKGDTCE----PCGRGFYKSSSQ
240 250 260 270 280
NP_001 DLQCSRCPTHSFSDKEGSSRCECEDGYYRAPSDPPYVACTRPPSAPQNLIFNINQTTVSL
290 300 310 320 330 340
>>XP_005248726 (OMIM: 602190) PREDICTED: ephrin type-A r (994 aa)
initn: 1219 init1: 682 opt: 1216 Z-score: 1456.8 bits: 279.3 E(85289): 2.1e-74
Smith-Waterman score: 1216; 63.3% identity (81.1% similar) in 286 aa overlap (8-292:7-282)
10 20 30 40 50 60
pF1KE3 METCAGPHPLRLFLCRMQLCLALLLGPWRPGTAEEVILLDSKASQAELGWTALPSNGWEE
.: ..:: . : : . .:.::.::::::.:.:: : . : :::::
XP_005 MVFQTRYPSWIILCYIWLLRFAHTG--EAQAAKEVLLLDSKAQQTELEWISSPPNGWEE
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 ISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIFVELQFTLRDCSSIPGAAG
:::.::. ::::::::.:.::::.:::.:.:::.: .:::::::.::::::.:.::. :
XP_005 ISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLG
60 70 80 90 100 110
130 140 150 160 170
pF1KE3 TCKETFNVYYLETEADLGRG-RPRLGGSRPRKIDTIAADESFTQGDLGERKMKLNTEVRE
:::::::.:: ::. : ::. : : :::::::::::::::::::::::::::::
XP_005 TCKETFNLYYYETDYDTGRNIRENLY----VKIDTIAADESFTQGDLGERKMKLNTEVRE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE3 IGPLSRRGFHLAFQDVGACVALVSVRVYYKQCRATVRGLATFPATAAESAFSTLVEVAGT
:::::..::.:::::::::.:::::.::::.: . ...:: :: :.. : ::.:::: ::
XP_005 IGPLSKKGFYLAFQDVGACIALVSVKVYYKKCWSIIENLAIFPDTVTGSEFSSLVEVRGT
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE3 CVAHSEGEPGSPPRMHCGADGEWLVPVGRCSCSAGFQERGDICEGIQLAGGRGVGV
::. .: : . :::::.:.::::::.:.: :.::.:..:: :: :::
XP_005 CVSSAEEEAENAPRMHCSAEGEWLVPIGKCICKAGYQQKGDTCE----PCGRGFYKSSSQ
240 250 260 270 280
XP_005 DLQCSRCPTHSFSDKEGSSRCECEDGYYRAPSDPPYVACTRPPSAPQNLIFNINQTTVSL
290 300 310 320 330 340
>>NP_004431 (OMIM: 602190) ephrin type-A receptor 7 isof (998 aa)
initn: 1219 init1: 682 opt: 1216 Z-score: 1456.8 bits: 279.3 E(85289): 2.1e-74
Smith-Waterman score: 1216; 63.3% identity (81.1% similar) in 286 aa overlap (8-292:7-282)
10 20 30 40 50 60
pF1KE3 METCAGPHPLRLFLCRMQLCLALLLGPWRPGTAEEVILLDSKASQAELGWTALPSNGWEE
.: ..:: . : : . .:.::.::::::.:.:: : . : :::::
NP_004 MVFQTRYPSWIILCYIWLLRFAHTG--EAQAAKEVLLLDSKAQQTELEWISSPPNGWEE
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 ISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIFVELQFTLRDCSSIPGAAG
:::.::. ::::::::.:.::::.:::.:.:::.: .:::::::.::::::.:.::. :
NP_004 ISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLG
60 70 80 90 100 110
130 140 150 160 170
pF1KE3 TCKETFNVYYLETEADLGRG-RPRLGGSRPRKIDTIAADESFTQGDLGERKMKLNTEVRE
:::::::.:: ::. : ::. : : :::::::::::::::::::::::::::::
NP_004 TCKETFNLYYYETDYDTGRNIRENLY----VKIDTIAADESFTQGDLGERKMKLNTEVRE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE3 IGPLSRRGFHLAFQDVGACVALVSVRVYYKQCRATVRGLATFPATAAESAFSTLVEVAGT
:::::..::.:::::::::.:::::.::::.: . ...:: :: :.. : ::.:::: ::
NP_004 IGPLSKKGFYLAFQDVGACIALVSVKVYYKKCWSIIENLAIFPDTVTGSEFSSLVEVRGT
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE3 CVAHSEGEPGSPPRMHCGADGEWLVPVGRCSCSAGFQERGDICEGIQLAGGRGVGV
::. .: : . :::::.:.::::::.:.: :.::.:..:: :: :::
NP_004 CVSSAEEEAENAPRMHCSAEGEWLVPIGKCICKAGYQQKGDTCE----PCGRGFYKSSSQ
240 250 260 270 280
NP_004 DLQCSRCPTHSFSDKEGSSRCECEDGYYRAPSDPPYVACTRPPSAPQNLIFNINQTTVSL
290 300 310 320 330 340
>>NP_872585 (OMIM: 179611) ephrin type-A receptor 3 isof (539 aa)
initn: 1091 init1: 515 opt: 1095 Z-score: 1315.4 bits: 252.3 E(85289): 1.6e-66
Smith-Waterman score: 1095; 60.2% identity (83.8% similar) in 259 aa overlap (25-283:19-271)
10 20 30 40 50 60
pF1KE3 METCAGPHPLRLFLCRMQLCLALLLGPWRPGTAEEVILLDSKASQAELGWTALPSNGWEE
.: : ..:: :::::. :.:::: . ::.::::
NP_872 MDCQLSILLLLSCSVLDSFGELIPQPSNEVNLLDSKTIQGELGWISYPSHGWEE
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 ISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIFVELQFTLRDCSSIPGAAG
::::::: ::::::::::.. .:.:::.:.:. :. .:.:.:::.::::::.::: . :
NP_872 ISGVDEHYTPIRTYQVCNVMDHSQNNWLRTNWVPRNSAQKIYVELKFTLRDCNSIPLVLG
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 TCKETFNVYYLETEADLGRGRPRLGGSRPRKIDTIAADESFTQGDLGERKMKLNTEVREI
:::::::.::.:.. : : .. . ::::::::::::: :::.: .:::::.::.
NP_872 TCKETFNLYYMESDDDHGV---KFREHQFTKIDTIAADESFTQMDLGDRILKLNTEIREV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE3 GPLSRRGFHLAFQDVGACVALVSVRVYYKQCRATVRGLATFPATAAESAFSTLVEVAGTC
::....::.::::::::::::::::::.:.: ::..:: :: :. .. ..:::: :.:
NP_872 GPVNKKGFYLAFQDVGACVALVSVRVYFKKCPFTVKNLAMFPDTVPMDS-QSLVEVRGSC
180 190 200 210 220 230
250 260 270 280 290
pF1KE3 VAHSEGEPGSPPRMHCGADGEWLVPVGRCSCSAGFQERGDICEGIQLAGGRGVGV
: .:. : .::::.:...::::::.:.:::.::..::: .:.
NP_872 VNNSKEE--DPPRMYCSTEGEWLVPIGKCSCNAGYEERGFMCQACRPGFYKALDGNMKCA
240 250 260 270 280
NP_872 KCPPHSSTQEDGSMNCRCENNYFRADKDPPSMACTRPPSSPRNVISNINETSVILDWSWP
290 300 310 320 330 340
295 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 14:43:33 2016 done: Mon Nov 7 14:43:34 2016
Total Scan time: 7.550 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]