Result of FASTA (omim) for pFN21AE3540
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE3540, 302 aa
  1>>>pF1KE3540 302 - 302 aa - 302 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.2013+/-0.0003; mu= 16.3944+/- 0.019
 mean_var=65.5251+/-13.321, 0's: 0 Z-trim(117.3): 15  B-trim: 0 in 0/51
 Lambda= 0.158442
 statistics sampled from 29084 (29099) to 29084 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.722), E-opt: 0.2 (0.341), width:  16
 Scan time:  6.530

The best scores are:                                      opt bits E(85289)
NP_003123 (OMIM: 182891) spermidine synthase [Homo ( 302) 2073 482.2 5.5e-136
XP_016857668 (OMIM: 182891) PREDICTED: spermidine  ( 316) 1767 412.2 6.5e-115
NP_001245352 (OMIM: 300105,309583) spermine syntha ( 313)  220 58.6 1.8e-08
XP_011543870 (OMIM: 300105,309583) PREDICTED: sper ( 332)  220 58.6 1.9e-08
XP_005274639 (OMIM: 300105,309583) PREDICTED: sper ( 332)  220 58.6 1.9e-08
XP_016885243 (OMIM: 300105,309583) PREDICTED: sper ( 335)  220 58.6 1.9e-08
XP_016885244 (OMIM: 300105,309583) PREDICTED: sper ( 335)  220 58.6 1.9e-08
NP_004586 (OMIM: 300105,309583) spermine synthase  ( 366)  220 58.7 2.1e-08
XP_016885242 (OMIM: 300105,309583) PREDICTED: sper ( 369)  220 58.7 2.1e-08


>>NP_003123 (OMIM: 182891) spermidine synthase [Homo sap  (302 aa)
 initn: 2073 init1: 2073 opt: 2073  Z-score: 2562.4  bits: 482.2 E(85289): 5.5e-136
Smith-Waterman score: 2073; 100.0% identity (100.0% similar) in 302 aa overlap (1-302:1-302)

               10        20        30        40        50        60
pF1KE3 MEPGPDGPAASGPAAIREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MEPGPDGPAASGPAAIREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 NVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 NVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 VQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITDSSDPMGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITDSSDPMGP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE3 AESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 AESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPT
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE3 YPSGQIGFMLCSKNPSTNFQEPVQPLTQQQVAQMQLKYYNSDVHRAAFVLPEFARKALND
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 YPSGQIGFMLCSKNPSTNFQEPVQPLTQQQVAQMQLKYYNSDVHRAAFVLPEFARKALND
              250       260       270       280       290       300

         
pF1KE3 VS
       ::
NP_003 VS
         

>>XP_016857668 (OMIM: 182891) PREDICTED: spermidine synt  (316 aa)
 initn: 1767 init1: 1767 opt: 1767  Z-score: 2184.0  bits: 412.2 E(85289): 6.5e-115
Smith-Waterman score: 1767; 100.0% identity (100.0% similar) in 255 aa overlap (1-255:1-255)

               10        20        30        40        50        60
pF1KE3 MEPGPDGPAASGPAAIREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEPGPDGPAASGPAAIREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 NVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 VQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITDSSDPMGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITDSSDPMGP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE3 AESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPT
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE3 YPSGQIGFMLCSKNPSTNFQEPVQPLTQQQVAQMQLKYYNSDVHRAAFVLPEFARKALND
       :::::::::::::::                                             
XP_016 YPSGQIGFMLCSKNPVRWGCLGVGVGGKVGINRDPCPCRARWLTPVIPALWEAEAGRSQG
              250       260       270       280       290       300

>>NP_001245352 (OMIM: 300105,309583) spermine synthase i  (313 aa)
 initn: 241 init1:  93 opt: 220  Z-score: 273.0  bits: 58.6 E(85289): 1.8e-08
Smith-Waterman score: 258; 28.4% identity (57.2% similar) in 250 aa overlap (13-241:59-298)

                                 10        20           30         
pF1KE3                   MEPGPDGPAASGPAAIREGWFRETCSLWP---GQALSLQVEQ
                                     :  .: : . .    ::   :. .  ....
NP_001 IFQEQGMAESVHTWQDHGYLATYTNKNGRLPPIVRGGAIDR---YWPTADGRLVEYDIDE
       30        40        50        60           70        80     

      40        50        60        70        80        90         
pF1KE3 LLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLI
       ... . : ::.: ...:: .::.:.:.: .. .: : ..: . : .    .. . . :::
NP_001 VVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSGKEDYTG-KDVLI
          90       100       110       120        130        140   

     100       110        120       130          140        150    
pF1KE3 IGGGDGGVLREVVK-HPSVESVVQCEIDEDVIQVSKKFLP---GMAI-GYSSSKLTLHVG
       .::::::.: :.:: .:.. ..:  :::. ::.  ::..    : .. . ...   . . 
NP_001 LGGGDGGILCEIVKLKPKMVTMV--EIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIE
           150       160         170       180       190       200 

          160          170             180       190       200     
pF1KE3 DGFEFMK---QNQDAFDVIITD------SSDPMGPAESLFKESYYQLMKTALKEDGVLCC
       : .  .:   ..   :: .:.:      :..:   .   : .   .:   .::.::    
NP_001 DCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT
             210       220       230       240       250       260 

         210         220         230       240       250       260 
pF1KE3 QGECQWLH--LDLIKEM--RQFCQSLFPVVAYAYCTIPTYPSGQIGFMLCSKNPSTNFQE
       ::.:  :   :.: .:.  : .:   :       : .:.:                    
NP_001 QGNCVNLTEALSLYEEQLGRLYCPVEFS--KEIVC-VPSYLELWVFYTVWKKAKP     
             270       280         290        300       310        

             270       280       290       300  
pF1KE3 PVQPLTQQQVAQMQLKYYNSDVHRAAFVLPEFARKALNDVS

>>XP_011543870 (OMIM: 300105,309583) PREDICTED: spermine  (332 aa)
 initn: 241 init1:  93 opt: 220  Z-score: 272.6  bits: 58.6 E(85289): 1.9e-08
Smith-Waterman score: 258; 28.4% identity (57.2% similar) in 250 aa overlap (13-241:78-317)

                                 10        20           30         
pF1KE3                   MEPGPDGPAASGPAAIREGWFRETCSLWP---GQALSLQVEQ
                                     :  .: : . .    ::   :. .  ....
XP_011 GKEEIDSILNKVEERMKELSQDSTGRVKRLPPIVRGGAIDR---YWPTADGRLVEYDIDE
        50        60        70        80           90       100    

      40        50        60        70        80        90         
pF1KE3 LLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLI
       ... . : ::.: ...:: .::.:.:.: .. .: : ..: . : .    .. . . :::
XP_011 VVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSGKEDYTG-KDVLI
          110       120       130       140        150        160  

     100       110        120       130          140        150    
pF1KE3 IGGGDGGVLREVVK-HPSVESVVQCEIDEDVIQVSKKFLP---GMAI-GYSSSKLTLHVG
       .::::::.: :.:: .:.. ..:  :::. ::.  ::..    : .. . ...   . . 
XP_011 LGGGDGGILCEIVKLKPKMVTMV--EIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIE
            170       180         190       200       210       220

          160          170             180       190       200     
pF1KE3 DGFEFMK---QNQDAFDVIITD------SSDPMGPAESLFKESYYQLMKTALKEDGVLCC
       : .  .:   ..   :: .:.:      :..:   .   : .   .:   .::.::    
XP_011 DCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT
              230       240       250       260       270       280

         210         220         230       240       250       260 
pF1KE3 QGECQWLH--LDLIKEM--RQFCQSLFPVVAYAYCTIPTYPSGQIGFMLCSKNPSTNFQE
       ::.:  :   :.: .:.  : .:   :       : .:.:                    
XP_011 QGNCVNLTEALSLYEEQLGRLYCPVEFS--KEIVC-VPSYLELWVFYTVWKKAKP     
              290       300         310        320       330       

             270       280       290       300  
pF1KE3 PVQPLTQQQVAQMQLKYYNSDVHRAAFVLPEFARKALNDVS

>>XP_005274639 (OMIM: 300105,309583) PREDICTED: spermine  (332 aa)
 initn: 241 init1:  93 opt: 220  Z-score: 272.6  bits: 58.6 E(85289): 1.9e-08
Smith-Waterman score: 258; 28.4% identity (57.2% similar) in 250 aa overlap (13-241:78-317)

                                 10        20           30         
pF1KE3                   MEPGPDGPAASGPAAIREGWFRETCSLWP---GQALSLQVEQ
                                     :  .: : . .    ::   :. .  ....
XP_005 GKEEIDSILNKVEERMKELSQDSTGRVKRLPPIVRGGAIDR---YWPTADGRLVEYDIDE
        50        60        70        80           90       100    

      40        50        60        70        80        90         
pF1KE3 LLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLI
       ... . : ::.: ...:: .::.:.:.: .. .: : ..: . : .    .. . . :::
XP_005 VVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSGKEDYTG-KDVLI
          110       120       130       140        150        160  

     100       110        120       130          140        150    
pF1KE3 IGGGDGGVLREVVK-HPSVESVVQCEIDEDVIQVSKKFLP---GMAI-GYSSSKLTLHVG
       .::::::.: :.:: .:.. ..:  :::. ::.  ::..    : .. . ...   . . 
XP_005 LGGGDGGILCEIVKLKPKMVTMV--EIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIE
            170       180         190       200       210       220

          160          170             180       190       200     
pF1KE3 DGFEFMK---QNQDAFDVIITD------SSDPMGPAESLFKESYYQLMKTALKEDGVLCC
       : .  .:   ..   :: .:.:      :..:   .   : .   .:   .::.::    
XP_005 DCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT
              230       240       250       260       270       280

         210         220         230       240       250       260 
pF1KE3 QGECQWLH--LDLIKEM--RQFCQSLFPVVAYAYCTIPTYPSGQIGFMLCSKNPSTNFQE
       ::.:  :   :.: .:.  : .:   :       : .:.:                    
XP_005 QGNCVNLTEALSLYEEQLGRLYCPVEFS--KEIVC-VPSYLELWVFYTVWKKAKP     
              290       300         310        320       330       

             270       280       290       300  
pF1KE3 PVQPLTQQQVAQMQLKYYNSDVHRAAFVLPEFARKALNDVS

>>XP_016885243 (OMIM: 300105,309583) PREDICTED: spermine  (335 aa)
 initn: 241 init1:  93 opt: 220  Z-score: 272.6  bits: 58.6 E(85289): 1.9e-08
Smith-Waterman score: 258; 28.4% identity (57.2% similar) in 250 aa overlap (13-241:78-317)

                                 10        20           30         
pF1KE3                   MEPGPDGPAASGPAAIREGWFRETCSLWP---GQALSLQVEQ
                                     :  .: : . .    ::   :. .  ....
XP_016 GKEEIDSILNKVEERMKELSQDSTGRVKRLPPIVRGGAIDR---YWPTADGRLVEYDIDE
        50        60        70        80           90       100    

      40        50        60        70        80        90         
pF1KE3 LLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLI
       ... . : ::.: ...:: .::.:.:.: .. .: : ..: . : .    .. . . :::
XP_016 VVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSGKEDYTG-KDVLI
          110       120       130       140        150        160  

     100       110        120       130          140        150    
pF1KE3 IGGGDGGVLREVVK-HPSVESVVQCEIDEDVIQVSKKFLP---GMAI-GYSSSKLTLHVG
       .::::::.: :.:: .:.. ..:  :::. ::.  ::..    : .. . ...   . . 
XP_016 LGGGDGGILCEIVKLKPKMVTMV--EIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIE
            170       180         190       200       210       220

          160          170             180       190       200     
pF1KE3 DGFEFMK---QNQDAFDVIITD------SSDPMGPAESLFKESYYQLMKTALKEDGVLCC
       : .  .:   ..   :: .:.:      :..:   .   : .   .:   .::.::    
XP_016 DCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT
              230       240       250       260       270       280

         210         220         230       240       250       260 
pF1KE3 QGECQWLH--LDLIKEM--RQFCQSLFPVVAYAYCTIPTYPSGQIGFMLCSKNPSTNFQE
       ::.:  :   :.: .:.  : .:   :       : .:.:                    
XP_016 QGNCVNLTEALSLYEEQLGRLYCPVEFS--KEIVC-VPSYLELYPLTVTFCCQIKAPK  
              290       300         310        320       330       

             270       280       290       300  
pF1KE3 PVQPLTQQQVAQMQLKYYNSDVHRAAFVLPEFARKALNDVS

>>XP_016885244 (OMIM: 300105,309583) PREDICTED: spermine  (335 aa)
 initn: 241 init1:  93 opt: 220  Z-score: 272.6  bits: 58.6 E(85289): 1.9e-08
Smith-Waterman score: 258; 28.4% identity (57.2% similar) in 250 aa overlap (13-241:78-317)

                                 10        20           30         
pF1KE3                   MEPGPDGPAASGPAAIREGWFRETCSLWP---GQALSLQVEQ
                                     :  .: : . .    ::   :. .  ....
XP_016 GKEEIDSILNKVEERMKELSQDSTGRVKRLPPIVRGGAIDR---YWPTADGRLVEYDIDE
        50        60        70        80           90       100    

      40        50        60        70        80        90         
pF1KE3 LLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLI
       ... . : ::.: ...:: .::.:.:.: .. .: : ..: . : .    .. . . :::
XP_016 VVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSGKEDYTG-KDVLI
          110       120       130       140        150        160  

     100       110        120       130          140        150    
pF1KE3 IGGGDGGVLREVVK-HPSVESVVQCEIDEDVIQVSKKFLP---GMAI-GYSSSKLTLHVG
       .::::::.: :.:: .:.. ..:  :::. ::.  ::..    : .. . ...   . . 
XP_016 LGGGDGGILCEIVKLKPKMVTMV--EIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIE
            170       180         190       200       210       220

          160          170             180       190       200     
pF1KE3 DGFEFMK---QNQDAFDVIITD------SSDPMGPAESLFKESYYQLMKTALKEDGVLCC
       : .  .:   ..   :: .:.:      :..:   .   : .   .:   .::.::    
XP_016 DCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT
              230       240       250       260       270       280

         210         220         230       240       250       260 
pF1KE3 QGECQWLH--LDLIKEM--RQFCQSLFPVVAYAYCTIPTYPSGQIGFMLCSKNPSTNFQE
       ::.:  :   :.: .:.  : .:   :       : .:.:                    
XP_016 QGNCVNLTEALSLYEEQLGRLYCPVEFS--KEIVC-VPSYLELYPLTVTFCCQIKAPK  
              290       300         310        320       330       

             270       280       290       300  
pF1KE3 PVQPLTQQQVAQMQLKYYNSDVHRAAFVLPEFARKALNDVS

>>NP_004586 (OMIM: 300105,309583) spermine synthase isof  (366 aa)
 initn: 241 init1:  93 opt: 220  Z-score: 272.0  bits: 58.7 E(85289): 2.1e-08
Smith-Waterman score: 258; 28.4% identity (57.2% similar) in 250 aa overlap (13-241:112-351)

                                 10        20           30         
pF1KE3                   MEPGPDGPAASGPAAIREGWFRETCSLWP---GQALSLQVEQ
                                     :  .: : . .    ::   :. .  ....
NP_004 GKEEIDSILNKVEERMKELSQDSTGRVKRLPPIVRGGAIDR---YWPTADGRLVEYDIDE
              90       100       110       120          130        

      40        50        60        70        80        90         
pF1KE3 LLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLI
       ... . : ::.: ...:: .::.:.:.: .. .: : ..: . : .    .. . . :::
NP_004 VVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSGKEDYTG-KDVLI
      140       150       160       170        180       190       

     100       110        120       130          140        150    
pF1KE3 IGGGDGGVLREVVK-HPSVESVVQCEIDEDVIQVSKKFLP---GMAI-GYSSSKLTLHVG
       .::::::.: :.:: .:.. ..:  :::. ::.  ::..    : .. . ...   . . 
NP_004 LGGGDGGILCEIVKLKPKMVTMV--EIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIE
        200       210         220       230       240       250    

          160          170             180       190       200     
pF1KE3 DGFEFMK---QNQDAFDVIITD------SSDPMGPAESLFKESYYQLMKTALKEDGVLCC
       : .  .:   ..   :: .:.:      :..:   .   : .   .:   .::.::    
NP_004 DCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT
          260       270       280       290       300       310    

         210         220         230       240       250       260 
pF1KE3 QGECQWLH--LDLIKEM--RQFCQSLFPVVAYAYCTIPTYPSGQIGFMLCSKNPSTNFQE
       ::.:  :   :.: .:.  : .:   :       : .:.:                    
NP_004 QGNCVNLTEALSLYEEQLGRLYCPVEFS--KEIVC-VPSYLELWVFYTVWKKAKP     
          320       330       340          350       360           

             270       280       290       300  
pF1KE3 PVQPLTQQQVAQMQLKYYNSDVHRAAFVLPEFARKALNDVS

>>XP_016885242 (OMIM: 300105,309583) PREDICTED: spermine  (369 aa)
 initn: 241 init1:  93 opt: 220  Z-score: 271.9  bits: 58.7 E(85289): 2.1e-08
Smith-Waterman score: 258; 28.4% identity (57.2% similar) in 250 aa overlap (13-241:112-351)

                                 10        20           30         
pF1KE3                   MEPGPDGPAASGPAAIREGWFRETCSLWP---GQALSLQVEQ
                                     :  .: : . .    ::   :. .  ....
XP_016 GKEEIDSILNKVEERMKELSQDSTGRVKRLPPIVRGGAIDR---YWPTADGRLVEYDIDE
              90       100       110       120          130        

      40        50        60        70        80        90         
pF1KE3 LLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLI
       ... . : ::.: ...:: .::.:.:.: .. .: : ..: . : .    .. . . :::
XP_016 VVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSGKEDYTG-KDVLI
      140       150       160       170        180       190       

     100       110        120       130          140        150    
pF1KE3 IGGGDGGVLREVVK-HPSVESVVQCEIDEDVIQVSKKFLP---GMAI-GYSSSKLTLHVG
       .::::::.: :.:: .:.. ..:  :::. ::.  ::..    : .. . ...   . . 
XP_016 LGGGDGGILCEIVKLKPKMVTMV--EIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIE
        200       210         220       230       240       250    

          160          170             180       190       200     
pF1KE3 DGFEFMK---QNQDAFDVIITD------SSDPMGPAESLFKESYYQLMKTALKEDGVLCC
       : .  .:   ..   :: .:.:      :..:   .   : .   .:   .::.::    
XP_016 DCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT
          260       270       280       290       300       310    

         210         220         230       240       250       260 
pF1KE3 QGECQWLH--LDLIKEM--RQFCQSLFPVVAYAYCTIPTYPSGQIGFMLCSKNPSTNFQE
       ::.:  :   :.: .:.  : .:   :       : .:.:                    
XP_016 QGNCVNLTEALSLYEEQLGRLYCPVEFS--KEIVC-VPSYLELYPLTVTFCCQIKAPK  
          320       330       340          350       360           

             270       280       290       300  
pF1KE3 PVQPLTQQQVAQMQLKYYNSDVHRAAFVLPEFARKALNDVS




302 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 14:42:27 2016 done: Mon Nov  7 14:42:28 2016
 Total Scan time:  6.530 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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