Result of FASTA (ccds) for
pFN21AE0964
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0964, 508 aa
1>>>pF1KE0964 508 - 508 aa - 508 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.1417+/-0.00118; mu= 9.6907+/- 0.069
mean_var=161.4507+/-36.166, 0's: 0 Z-trim(105.8): 82 B-trim: 0 in 0/50
Lambda= 0.100938
statistics sampled from 8567 (8632) to 8567 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.635), E-opt: 0.2 (0.265), width: 16
Scan time: 3.090
The best scores are: opt bits E(32554)
CCDS1859.1 VRK2 gene_id:7444|Hs108|chr2 ( 508) 3432 512.6 4.1e-145
CCDS46292.1 VRK2 gene_id:7444|Hs108|chr2 ( 485) 3265 488.3 8.3e-138
CCDS46291.1 VRK2 gene_id:7444|Hs108|chr2 ( 396) 2681 403.1 2.9e-112
CCDS9947.1 VRK1 gene_id:7443|Hs108|chr14 ( 396) 1151 180.3 3.4e-45
CCDS33076.1 VRK3 gene_id:51231|Hs108|chr19 ( 424) 676 111.2 2.3e-24
CCDS12791.1 VRK3 gene_id:51231|Hs108|chr19 ( 474) 676 111.2 2.5e-24
CCDS77334.1 VRK3 gene_id:51231|Hs108|chr19 ( 412) 634 105.1 1.6e-22
CCDS11806.1 CSNK1D gene_id:1453|Hs108|chr17 ( 409) 372 66.9 4.8e-11
CCDS11805.1 CSNK1D gene_id:1453|Hs108|chr17 ( 415) 372 66.9 4.9e-11
>>CCDS1859.1 VRK2 gene_id:7444|Hs108|chr2 (508 aa)
initn: 3432 init1: 3432 opt: 3432 Z-score: 2718.7 bits: 512.6 E(32554): 4.1e-145
Smith-Waterman score: 3432; 99.8% identity (100.0% similar) in 508 aa overlap (1-508:1-508)
10 20 30 40 50 60
pF1KE0 MPPKRNEKYKLPIPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS18 MPPKRNEKYKLPIPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 KVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS18 KVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 MERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDVKAANLLLGYKNPD
::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
CCDS18 MERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS18 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 LRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS18 LRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAY
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 DEKPNYQALKKILNPHGIPLGPLDFSTKGQSINVHTPNSQKVDSQKAATKQVNKAHNRLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS18 DEKPNYQALKKILNPHGIPLGPLDFSTKGQSINVHTPNSQKVDSQKAATKQVNKAHNRLI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 EKKVHSERSAESCATWKVQKEEKLIGLMNNEAAQESTRRRQKYQESQEPLNEVNSFPQKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS18 EKKVHSERSAESCATWKVQKEEKLIGLMNNEAAQESTRRRQKYQESQEPLNEVNSFPQKI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 SYTQFPNSFYEPHQDFTSPDIFKKSRSPSWYKYTSTVSTGITDLESSTGLWPTISQFTLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS18 SYTQFPNSFYEPHQDFTSPDIFKKSRSPSWYKYTSTVSTGITDLESSTGLWPTISQFTLS
430 440 450 460 470 480
490 500
pF1KE0 EETNADVYYYRIIIPVLLMLVFLALFFL
::::::::::::::::::::::::::::
CCDS18 EETNADVYYYRIIIPVLLMLVFLALFFL
490 500
>>CCDS46292.1 VRK2 gene_id:7444|Hs108|chr2 (485 aa)
initn: 3265 init1: 3265 opt: 3265 Z-score: 2587.6 bits: 488.3 E(32554): 8.3e-138
Smith-Waterman score: 3265; 99.8% identity (100.0% similar) in 485 aa overlap (24-508:1-485)
10 20 30 40 50 60
pF1KE0 MPPKRNEKYKLPIPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVV
:::::::::::::::::::::::::::::::::::::
CCDS46 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVV
10 20 30
70 80 90 100 110 120
pF1KE0 KVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 KVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMV
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE0 MERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDVKAANLLLGYKNPD
::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
CCDS46 MERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPD
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE0 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCM
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE0 LRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAY
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE0 DEKPNYQALKKILNPHGIPLGPLDFSTKGQSINVHTPNSQKVDSQKAATKQVNKAHNRLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DEKPNYQALKKILNPHGIPLGPLDFSTKGQSINVHTPNSQKVDSQKAATKQVNKAHNRLI
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE0 EKKVHSERSAESCATWKVQKEEKLIGLMNNEAAQESTRRRQKYQESQEPLNEVNSFPQKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EKKVHSERSAESCATWKVQKEEKLIGLMNNEAAQESTRRRQKYQESQEPLNEVNSFPQKI
340 350 360 370 380 390
430 440 450 460 470 480
pF1KE0 SYTQFPNSFYEPHQDFTSPDIFKKSRSPSWYKYTSTVSTGITDLESSTGLWPTISQFTLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SYTQFPNSFYEPHQDFTSPDIFKKSRSPSWYKYTSTVSTGITDLESSTGLWPTISQFTLS
400 410 420 430 440 450
490 500
pF1KE0 EETNADVYYYRIIIPVLLMLVFLALFFL
::::::::::::::::::::::::::::
CCDS46 EETNADVYYYRIIIPVLLMLVFLALFFL
460 470 480
>>CCDS46291.1 VRK2 gene_id:7444|Hs108|chr2 (396 aa)
initn: 2681 init1: 2681 opt: 2681 Z-score: 2129.1 bits: 403.1 E(32554): 2.9e-112
Smith-Waterman score: 2681; 99.7% identity (100.0% similar) in 394 aa overlap (1-394:1-394)
10 20 30 40 50 60
pF1KE0 MPPKRNEKYKLPIPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MPPKRNEKYKLPIPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 KVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 KVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 MERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDVKAANLLLGYKNPD
::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
CCDS46 MERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 LRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAY
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 DEKPNYQALKKILNPHGIPLGPLDFSTKGQSINVHTPNSQKVDSQKAATKQVNKAHNRLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DEKPNYQALKKILNPHGIPLGPLDFSTKGQSINVHTPNSQKVDSQKAATKQVNKAHNRLI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 EKKVHSERSAESCATWKVQKEEKLIGLMNNEAAQESTRRRQKYQESQEPLNEVNSFPQKI
::::::::::::::::::::::::::::::::::
CCDS46 EKKVHSERSAESCATWKVQKEEKLIGLMNNEAAQFR
370 380 390
430 440 450 460 470 480
pF1KE0 SYTQFPNSFYEPHQDFTSPDIFKKSRSPSWYKYTSTVSTGITDLESSTGLWPTISQFTLS
>>CCDS9947.1 VRK1 gene_id:7443|Hs108|chr14 (396 aa)
initn: 1182 init1: 728 opt: 1151 Z-score: 925.0 bits: 180.3 E(32554): 3.4e-45
Smith-Waterman score: 1162; 47.0% identity (71.4% similar) in 406 aa overlap (4-405:12-396)
10 20 30 40 50
pF1KE0 MPPKRNEKYKLPIPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKP
. . : .: : :... :: ..: .: ::.:::: :::: :.
CCDS99 MPRVKAAQAGRQSSAKRHLAEQFAVGEIITDMAKKEWKVGLPIGQGGFGCIYLA-DMNSS
10 20 30 40 50
60 70 80 90 100
pF1KE0 EK---DARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLT
:. :: ::::: ..:::::.:::::::.:: . :.:::. ..: :::.: ..::::
CCDS99 ESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLH
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE0 EFKGRSYRFMVMERLGIDLQKISGQNGT-FKKSTVLQLGIRMLDVLEYIHENEYVHGDVK
. .:.:::::.:.:.: ::::: :. :...:::::..:.::.::::::.::::::.:
CCDS99 DKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIK
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE0 AANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALS
:.::::.:::::::::.::::.:::::.: ::.:.:.:.. :.:::::::.:::.::: :
CCDS99 ASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPS
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE0 RRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEI
::.:.:::::::..:: :.::::.::::: :. .: ... . . : : .. ::
CCDS99 RRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPEKNKPGEI
240 250 260 270 280 290
290 300 310 320 330 340
pF1KE0 AQFLVCAHSLAYDEKPNYQALKKILNPHGIPLGPLDFSTKGQSINVHTPNSQKVDSQKAA
:... .. : : ::: :. :. :: .: : . :. :..
CCDS99 AKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDLSV---------VENGGLK
300 310 320 330 340 350
350 360 370 380 390 400
pF1KE0 TKQVNKAHNRLIEKKVHSERSAESCATWKVQKEEKLIGLMNNEAAQESTRRRQKYQESQE
.: ..: ... ::.. .: ..:. . :. . : :: : .: :.. :.
CCDS99 AKTITKKRKKEIEES--KEPGVED-TEWSNTQTE--------EAIQTRSRTRKRVQK
360 370 380 390
410 420 430 440 450 460
pF1KE0 PLNEVNSFPQKISYTQFPNSFYEPHQDFTSPDIFKKSRSPSWYKYTSTVSTGITDLESST
>>CCDS33076.1 VRK3 gene_id:51231|Hs108|chr19 (424 aa)
initn: 667 init1: 483 opt: 676 Z-score: 550.7 bits: 111.2 E(32554): 2.3e-24
Smith-Waterman score: 677; 36.8% identity (63.2% similar) in 334 aa overlap (15-322:102-424)
10 20 30 40
pF1KE0 MPPKRNEKYKLPIPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIY
.: : :: : : :: : . . :..:
CCDS33 SPQKTSCSPQKTRQSPQTLKRSRVTTSLEALPTGTVLTDKSGRQWKLKSFQTRDNQGILY
80 90 100 110 120 130
50 60 70 80 90
pF1KE0 LAFPTNK------PEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYL
: ::. :.:. . .:.. .. : ::.: .:.::.:: ..:: . . :
CCDS33 EAAPTSTLTCDSGPQKQ-KFSLKLDAKD-GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL
140 150 160 170 180
100 110 120 130 140 150
pF1KE0 GIPLFYGSGLTEFKGRSYRFMVMERLGIDLQK---ISGQNGTFKKSTVLQLGIRMLDVLE
.:: .: :. . : :::.:. :: .::. .: .. .... .:::.. :.::.::
CCDS33 AIPTCMGFGVHQDK---YRFLVLPSLGRSLQSALDVSPKH-VLSERSVLQVACRLLDALE
190 200 210 220 230 240
160 170 180 190 200 210
pF1KE0 YIHENEYVHGDVKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIE
..::::::::.: : :... .. .:: :: ::...::::.:.: : :. :. :.: .:
CCDS33 FLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLE
250 260 270 280 290 300
220 230 240 250 260 270
pF1KE0 FTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSV
: :.: ::: . :::::.. ::::::.:: : ::: . : . .. : ...:. :
CCDS33 FISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDK-PGPF
310 320 330 340 350 360
280 290 300 310
pF1KE0 L----KWA-PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKIL------------NPHGI
. .: :: . . ..: . .:.:.::: : :.. : .: :.
CCDS33 VGPCGHWIRPSET----LQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVSPYDPIGL
370 380 390 400 410 420
320 330 340 350 360 370
pF1KE0 PLGPLDFSTKGQSINVHTPNSQKVDSQKAATKQVNKAHNRLIEKKVHSERSAESCATWKV
:. :
CCDS33 PMVP
>>CCDS12791.1 VRK3 gene_id:51231|Hs108|chr19 (474 aa)
initn: 667 init1: 483 opt: 676 Z-score: 550.1 bits: 111.2 E(32554): 2.5e-24
Smith-Waterman score: 677; 36.8% identity (63.2% similar) in 334 aa overlap (15-322:152-474)
10 20 30 40
pF1KE0 MPPKRNEKYKLPIPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIY
.: : :: : : :: : . . :..:
CCDS12 SPQKTSCSPQKTRQSPQTLKRSRVTTSLEALPTGTVLTDKSGRQWKLKSFQTRDNQGILY
130 140 150 160 170 180
50 60 70 80 90
pF1KE0 LAFPTNK------PEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYL
: ::. :.:. . .:.. .. : ::.: .:.::.:: ..:: . . :
CCDS12 EAAPTSTLTCDSGPQKQ-KFSLKLDAKD-GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL
190 200 210 220 230
100 110 120 130 140 150
pF1KE0 GIPLFYGSGLTEFKGRSYRFMVMERLGIDLQK---ISGQNGTFKKSTVLQLGIRMLDVLE
.:: .: :. . : :::.:. :: .::. .: .. .... .:::.. :.::.::
CCDS12 AIPTCMGFGVHQDK---YRFLVLPSLGRSLQSALDVSPKH-VLSERSVLQVACRLLDALE
240 250 260 270 280 290
160 170 180 190 200 210
pF1KE0 YIHENEYVHGDVKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIE
..::::::::.: : :... .. .:: :: ::...::::.:.: : :. :. :.: .:
CCDS12 FLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLE
300 310 320 330 340 350
220 230 240 250 260 270
pF1KE0 FTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSV
: :.: ::: . :::::.. ::::::.:: : ::: . : . .. : ...:. :
CCDS12 FISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDK-PGPF
360 370 380 390 400 410
280 290 300 310
pF1KE0 L----KWA-PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKIL------------NPHGI
. .: :: . . ..: . .:.:.::: : :.. : .: :.
CCDS12 VGPCGHWIRPSET----LQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVSPYDPIGL
420 430 440 450 460 470
320 330 340 350 360 370
pF1KE0 PLGPLDFSTKGQSINVHTPNSQKVDSQKAATKQVNKAHNRLIEKKVHSERSAESCATWKV
:. :
CCDS12 PMVP
>>CCDS77334.1 VRK3 gene_id:51231|Hs108|chr19 (412 aa)
initn: 652 init1: 444 opt: 634 Z-score: 517.8 bits: 105.1 E(32554): 1.6e-22
Smith-Waterman score: 634; 40.5% identity (67.2% similar) in 262 aa overlap (15-267:152-407)
10 20 30 40
pF1KE0 MPPKRNEKYKLPIPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIY
.: : :: : : :: : . . :..:
CCDS77 SPQKTSCSPQKTRQSPQTLKRSRVTTSLEALPTGTVLTDKSGRQWKLKSFQTRDNQGILY
130 140 150 160 170 180
50 60 70 80 90
pF1KE0 LAFPTNK------PEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYL
: ::. :.:. . .:.. .. : ::.: .:.::.:: ..:: . . :
CCDS77 EAAPTSTLTCDSGPQKQ-KFSLKLDAKD-GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL
190 200 210 220 230
100 110 120 130 140 150
pF1KE0 GIPLFYGSGLTEFKGRSYRFMVMERLGIDLQK---ISGQNGTFKKSTVLQLGIRMLDVLE
.:: .: :. . : :::.:. :: .::. .: .. .... .:::.. :.::.::
CCDS77 AIPTCMGFGVHQDK---YRFLVLPSLGRSLQSALDVSPKH-VLSERSVLQVACRLLDALE
240 250 260 270 280 290
160 170 180 190 200 210
pF1KE0 YIHENEYVHGDVKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIE
..::::::::.: : :... .. .:: :: ::...::::.:.: : :. :. :.: .:
CCDS77 FLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLE
300 310 320 330 340 350
220 230 240 250 260 270
pF1KE0 FTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSV
: :.: ::: . :::::.. ::::::.:: : ::: . : . .. : .:
CCDS77 FISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKLPWDSF
360 370 380 390 400 410
280 290 300 310 320 330
pF1KE0 LKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPLGPLDFSTKGQSINVH
>>CCDS11806.1 CSNK1D gene_id:1453|Hs108|chr17 (409 aa)
initn: 378 init1: 181 opt: 372 Z-score: 311.7 bits: 66.9 E(32554): 4.8e-11
Smith-Waterman score: 426; 32.8% identity (57.4% similar) in 357 aa overlap (26-370:6-322)
10 20 30 40 50 60
pF1KE0 MPPKRNEKYKLPIPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVV
::.. ::.:::::.:: :::. :. : .
CCDS11 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVA---I
10 20 30
70 80 90 100 110
pF1KE0 KVE-YQENGP-LFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRF
:.: . . : : : :.:. . .::: . : .: .:
CCDS11 KLECVKTKHPQLHIESKIYKMMQGG--------------VGIPTIRWCGA---EG-DYNV
40 50 60 70
120 130 140 150 160 170
pF1KE0 MVMERLGIDLQKISG-QNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDVKAANLLLGY-
:::: :: .:. . . . :. .::: :. .:.. .:::: ....: ::: :.:.:
CCDS11 MVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG
80 90 100 110 120 130
180 190 200 210 220 230
pF1KE0 KNPDQVYLADYGLSYRYCPNGNHKQ--YQENPRKGHNGTIEFTSLDAHKGVALSRRSDVE
:. . ::. :.::. .: .:.. :.:: :. .:: ...:...: :. :::.:.:
CCDS11 KKGNLVYIIDFGLAKKYRDARTHQHIPYREN--KNLTGTARYASINTHLGIEQSRRDDLE
140 150 160 170 180 190
240 250 260 270 280
pF1KE0 ILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDE----LPQSVL-KWAPSGSSCCEIA
::: .. . :.::: :.:: .:.. : . ..: : :: : :: :.:
CCDS11 SLGYVLMYFNLGSLPW-QGLK--AATKRQKYERISEKKMSTPIEVLCKGYPS-----EFA
200 210 220 230 240
290 300 310 320 330 340
pF1KE0 QFLVCAHSLAYDEKPNYQALKKILNPHGIPLGPLDFSTKGQSIN-VHTPNSQKVDSQKAA
.: .:: .:.::.:. :.... : .: : . : : : ...::
CCDS11 TYLNFCRSLRFDDKPDYSYLRQLFRNL--------FHRQGFSYDYVFDWNMLKFGASRAA
250 260 270 280 290 300
350 360 370 380 390 400
pF1KE0 TKQVNKAHNRLIEKKVHSERSAESCATWKVQKEEKLIGLMNNEAAQESTRRRQKYQESQE
. ..: :. ::. :
CCDS11 DDAERERRDRE-ERLRHSRNPATRGLPSTASGRLRGTQEVAPPTPLTPTSHTANTSPRPV
310 320 330 340 350 360
>>CCDS11805.1 CSNK1D gene_id:1453|Hs108|chr17 (415 aa)
initn: 378 init1: 181 opt: 372 Z-score: 311.6 bits: 66.9 E(32554): 4.9e-11
Smith-Waterman score: 426; 32.8% identity (57.4% similar) in 357 aa overlap (26-370:6-322)
10 20 30 40 50 60
pF1KE0 MPPKRNEKYKLPIPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVV
::.. ::.:::::.:: :::. :. : .
CCDS11 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVA---I
10 20 30
70 80 90 100 110
pF1KE0 KVE-YQENGP-LFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRF
:.: . . : : : :.:. . .::: . : .: .:
CCDS11 KLECVKTKHPQLHIESKIYKMMQGG--------------VGIPTIRWCGA---EG-DYNV
40 50 60 70
120 130 140 150 160 170
pF1KE0 MVMERLGIDLQKISG-QNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDVKAANLLLGY-
:::: :: .:. . . . :. .::: :. .:.. .:::: ....: ::: :.:.:
CCDS11 MVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG
80 90 100 110 120 130
180 190 200 210 220 230
pF1KE0 KNPDQVYLADYGLSYRYCPNGNHKQ--YQENPRKGHNGTIEFTSLDAHKGVALSRRSDVE
:. . ::. :.::. .: .:.. :.:: :. .:: ...:...: :. :::.:.:
CCDS11 KKGNLVYIIDFGLAKKYRDARTHQHIPYREN--KNLTGTARYASINTHLGIEQSRRDDLE
140 150 160 170 180 190
240 250 260 270 280
pF1KE0 ILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDE----LPQSVL-KWAPSGSSCCEIA
::: .. . :.::: :.:: .:.. : . ..: : :: : :: :.:
CCDS11 SLGYVLMYFNLGSLPW-QGLK--AATKRQKYERISEKKMSTPIEVLCKGYPS-----EFA
200 210 220 230 240
290 300 310 320 330 340
pF1KE0 QFLVCAHSLAYDEKPNYQALKKILNPHGIPLGPLDFSTKGQSIN-VHTPNSQKVDSQKAA
.: .:: .:.::.:. :.... : .: : . : : : ...::
CCDS11 TYLNFCRSLRFDDKPDYSYLRQLFRNL--------FHRQGFSYDYVFDWNMLKFGASRAA
250 260 270 280 290 300
350 360 370 380 390 400
pF1KE0 TKQVNKAHNRLIEKKVHSERSAESCATWKVQKEEKLIGLMNNEAAQESTRRRQKYQESQE
. ..: :. ::. :
CCDS11 DDAERERRDRE-ERLRHSRNPATRGLPSTASGRLRGTQEVAPPTPLTPTSHTANTSPRPV
310 320 330 340 350 360
508 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 08:07:32 2016 done: Sat Nov 5 08:07:32 2016
Total Scan time: 3.090 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]