FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1260, 595 aa 1>>>pF1KE1260 595 - 595 aa - 595 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 11.4889+/-0.00041; mu= -5.0878+/- 0.026 mean_var=542.1499+/-112.892, 0's: 0 Z-trim(125.0): 1513 B-trim: 0 in 0/58 Lambda= 0.055083 statistics sampled from 46019 (47818) to 46019 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.815), E-opt: 0.2 (0.561), width: 16 Scan time: 13.460 The best scores are: opt bits E(85289) NP_001129711 (OMIM: 616982,617039) putative histon ( 595) 4210 349.2 2.2e-95 XP_011542028 (OMIM: 616982,617039) PREDICTED: puta ( 395) 2814 238.1 4.3e-62 NP_067632 (OMIM: 616458,616488) PR domain zinc fin ( 367) 419 47.7 8.1e-05 XP_016882236 (OMIM: 165260) PREDICTED: zinc finger ( 327) 404 46.5 0.00017 XP_011525220 (OMIM: 165260) PREDICTED: zinc finger ( 327) 404 46.5 0.00017 NP_001166122 (OMIM: 601276) zinc finger protein 17 ( 481) 404 46.7 0.00022 XP_006723255 (OMIM: 165260) PREDICTED: zinc finger ( 491) 404 46.7 0.00022 XP_011525219 (OMIM: 165260) PREDICTED: zinc finger ( 491) 404 46.7 0.00022 NP_001308045 (OMIM: 165260) zinc finger and SCAN d ( 491) 404 46.7 0.00022 NP_862829 (OMIM: 165260) zinc finger and SCAN doma ( 491) 404 46.7 0.00022 NP_005665 (OMIM: 601069) zinc finger protein 239 i ( 458) 400 46.3 0.00026 XP_005271889 (OMIM: 601069) PREDICTED: zinc finger ( 458) 400 46.3 0.00026 NP_001311277 (OMIM: 601069) zinc finger protein 23 ( 458) 400 46.3 0.00026 XP_011538540 (OMIM: 601069) PREDICTED: zinc finger ( 458) 400 46.3 0.00026 XP_006718066 (OMIM: 601069) PREDICTED: zinc finger ( 458) 400 46.3 0.00026 NP_001311279 (OMIM: 601069) zinc finger protein 23 ( 458) 400 46.3 0.00026 NP_001311276 (OMIM: 601069) zinc finger protein 23 ( 458) 400 46.3 0.00026 NP_001092754 (OMIM: 601069) zinc finger protein 23 ( 458) 400 46.3 0.00026 NP_001092753 (OMIM: 601069) zinc finger protein 23 ( 458) 400 46.3 0.00026 NP_001311278 (OMIM: 601069) zinc finger protein 23 ( 458) 400 46.3 0.00026 NP_001092752 (OMIM: 601069) zinc finger protein 23 ( 458) 400 46.3 0.00026 NP_001311280 (OMIM: 601069) zinc finger protein 23 ( 458) 400 46.3 0.00026 NP_001311281 (OMIM: 601069) zinc finger protein 23 ( 500) 400 46.4 0.00028 XP_011538539 (OMIM: 601069) PREDICTED: zinc finger ( 500) 400 46.4 0.00028 XP_011538537 (OMIM: 601069) PREDICTED: zinc finger ( 500) 400 46.4 0.00028 XP_011538536 (OMIM: 601069) PREDICTED: zinc finger ( 500) 400 46.4 0.00028 XP_016872229 (OMIM: 601069) PREDICTED: zinc finger ( 500) 400 46.4 0.00028 XP_006718064 (OMIM: 601069) PREDICTED: zinc finger ( 500) 400 46.4 0.00028 XP_011538538 (OMIM: 601069) PREDICTED: zinc finger ( 500) 400 46.4 0.00028 NP_001311282 (OMIM: 601069) zinc finger protein 23 ( 571) 400 46.4 0.0003 XP_011538534 (OMIM: 601069) PREDICTED: zinc finger ( 602) 400 46.5 0.00031 XP_016881658 (OMIM: 604751) PREDICTED: zinc finger ( 319) 385 44.9 0.00048 XP_016881657 (OMIM: 604751) PREDICTED: zinc finger ( 319) 385 44.9 0.00048 XP_016881660 (OMIM: 604751) PREDICTED: zinc finger ( 319) 385 44.9 0.00048 XP_016881659 (OMIM: 604751) PREDICTED: zinc finger ( 319) 385 44.9 0.00048 XP_016881661 (OMIM: 604751) PREDICTED: zinc finger ( 319) 385 44.9 0.00048 XP_011526674 (OMIM: 611811) PREDICTED: zinc finger ( 434) 388 45.3 0.00049 XP_011526673 (OMIM: 611811) PREDICTED: zinc finger ( 476) 388 45.4 0.00052 XP_005259469 (OMIM: 604749) PREDICTED: zinc finger ( 734) 392 45.9 0.00055 XP_016882860 (OMIM: 611811) PREDICTED: zinc finger ( 519) 388 45.4 0.00055 NP_004225 (OMIM: 604749) zinc finger protein 235 [ ( 738) 392 45.9 0.00056 XP_005259428 (OMIM: 610671) PREDICTED: zinc finger (1055) 396 46.4 0.00056 NP_149104 (OMIM: 610671) zinc finger protein 628 [ (1059) 396 46.4 0.00056 XP_011526667 (OMIM: 611811) PREDICTED: zinc finger ( 556) 388 45.5 0.00058 XP_016882858 (OMIM: 611811) PREDICTED: zinc finger ( 556) 388 45.5 0.00058 XP_016882859 (OMIM: 611811) PREDICTED: zinc finger ( 556) 388 45.5 0.00058 XP_011526669 (OMIM: 611811) PREDICTED: zinc finger ( 556) 388 45.5 0.00058 XP_011526671 (OMIM: 611811) PREDICTED: zinc finger ( 556) 388 45.5 0.00058 XP_011526665 (OMIM: 611811) PREDICTED: zinc finger ( 556) 388 45.5 0.00058 XP_011526668 (OMIM: 611811) PREDICTED: zinc finger ( 556) 388 45.5 0.00058 >>NP_001129711 (OMIM: 616982,617039) putative histone-ly (595 aa) initn: 4210 init1: 4210 opt: 4210 Z-score: 1833.3 bits: 349.2 E(85289): 2.2e-95 Smith-Waterman score: 4210; 100.0% identity (100.0% similar) in 595 aa overlap (1-595:1-595) 10 20 30 40 50 60 pF1KE1 MLKPGDPGGSAFLKVDPAYLQHWQQLFPHGGAGPLKGSGAAGLLSAPQPLQPPPPPPPPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MLKPGDPGGSAFLKVDPAYLQHWQQLFPHGGAGPLKGSGAAGLLSAPQPLQPPPPPPPPE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 RAEPPPDSLRPRPASLSSASSTPASSSTSASSASSCAAAAAAAALAGLSALPVSQLPVFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RAEPPPDSLRPRPASLSSASSTPASSSTSASSASSCAAAAAAAALAGLSALPVSQLPVFA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 PLAAAAVAAEPLPPKELCLGATSGPGPVKCGGGGGGGGEGRGAPRFRCSAEELDYYLYGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PLAAAAVAAEPLPPKELCLGATSGPGPVKCGGGGGGGGEGRGAPRFRCSAEELDYYLYGQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 QRMEIIPLNQHTSDPNNRCDMCADNRNGECPMHGPLHSLRRLVGTSSAAAAAPPPELPEW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QRMEIIPLNQHTSDPNNRCDMCADNRNGECPMHGPLHSLRRLVGTSSAAAAAPPPELPEW 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 LRDLPREVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLPPEKVQAGAVRNTQHLWE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LRDLPREVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLPPEKVQAGAVRNTQHLWE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 IYDQDGTLQHFIDGGEPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRACIDIPRGTEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IYDQDGTLQHFIDGGEPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRACIDIPRGTEL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 LVWYNDSYTSFFGIPLQCIAQDENLNVPSTVMEAMCRQDALQPFNKSSKLAPTTQQRSVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LVWYNDSYTSFFGIPLQCIAQDENLNVPSTVMEAMCRQDALQPFNKSSKLAPTTQQRSVV 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 FPQTPCSRNFSLLDKSGPIESGFNQINVKNQRVLASPTSTSQLHSEFSDWHLWKCGQCFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FPQTPCSRNFSLLDKSGPIESGFNQINVKNQRVLASPTSTSQLHSEFSDWHLWKCGQCFK 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE1 TFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAG 490 500 510 520 530 540 550 560 570 580 590 pF1KE1 ATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPESIEVD ::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPESIEVD 550 560 570 580 590 >>XP_011542028 (OMIM: 616982,617039) PREDICTED: putative (395 aa) initn: 2814 init1: 2814 opt: 2814 Z-score: 1235.7 bits: 238.1 E(85289): 4.3e-62 Smith-Waterman score: 2814; 100.0% identity (100.0% similar) in 395 aa overlap (201-595:1-395) 180 190 200 210 220 230 pF1KE1 EELDYYLYGQQRMEIIPLNQHTSDPNNRCDMCADNRNGECPMHGPLHSLRRLVGTSSAAA :::::::::::::::::::::::::::::: XP_011 MCADNRNGECPMHGPLHSLRRLVGTSSAAA 10 20 30 240 250 260 270 280 290 pF1KE1 AAPPPELPEWLRDLPREVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLPPEKVQAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AAPPPELPEWLRDLPREVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLPPEKVQAG 40 50 60 70 80 90 300 310 320 330 340 350 pF1KE1 AVRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AVRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRA 100 110 120 130 140 150 360 370 380 390 400 410 pF1KE1 CIDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPSTVMEAMCRQDALQPFNKSSKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 CIDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPSTVMEAMCRQDALQPFNKSSKL 160 170 180 190 200 210 420 430 440 450 460 470 pF1KE1 APTTQQRSVVFPQTPCSRNFSLLDKSGPIESGFNQINVKNQRVLASPTSTSQLHSEFSDW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 APTTQQRSVVFPQTPCSRNFSLLDKSGPIESGFNQINVKNQRVLASPTSTSQLHSEFSDW 220 230 240 250 260 270 480 490 500 510 520 530 pF1KE1 HLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 HLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFK 280 290 300 310 320 330 540 550 560 570 580 590 pF1KE1 CGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 CGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPE 340 350 360 370 380 390 pF1KE1 SIEVD ::::: XP_011 SIEVD >>NP_067632 (OMIM: 616458,616488) PR domain zinc finger (367 aa) initn: 758 init1: 308 opt: 419 Z-score: 207.5 bits: 47.7 E(85289): 8.1e-05 Smith-Waterman score: 512; 31.2% identity (52.5% similar) in 343 aa overlap (244-586:84-328) 220 230 240 250 260 270 pF1KE1 GPLHSLRRLVGTSSAAAAAPPPELPEWLRDLPREVCLCTSTVPGLAYGICAAQRIQQGTW :: :: . :..:: . :: . :. :: NP_067 SHHASPKTAFTAEVLAQSFSGEVQKLSSLVLPAEVIIAQSSIPGEGLGIFSKTWIKAGTE 60 70 80 90 100 110 280 290 300 310 320 330 pF1KE1 IGPFQGVLLPPEKVQAGAVRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYIRCARHCG .::: : .. ::.:. .:.. .::....:::...:::... .. ::: ::.:::. NP_067 MGPFTGRVIAPEHVD--ICKNNNLMWEVFNEDGTVRYFIDASQEDHRSWMTYIKCARNEQ 120 130 140 150 160 170 340 350 360 370 380 390 pF1KE1 EQNLTVVQYRSNIFYRACIDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPSTVME :::: ::: ..:::.: :: ::::::..:...:.::: .::. .: NP_067 EQNLEVVQIGTSIFYKAIEMIPPDQELLVWYGNSHNTFLGIP----------GVPG--LE 180 190 200 210 400 410 420 430 440 450 pF1KE1 AMCRQDALQPFNKSSKLAPTTQQRSVVFPQTPCSRNFSLLDKSGPIESGFNQINVKNQRV .: : :: . :. . .:: .: :. NP_067 ----ED--QKKNKHEDFHPADS-------------------AAGP--AG---------RM 220 230 240 460 470 480 490 500 510 pF1KE1 LASPTSTSQLHSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQP .: : . :..: NP_067 --------------------RCVICHRGFNSR---------------------------- 250 520 530 540 550 560 570 pF1KE1 SELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLS :.::.:. :. :.:: : .:.: :. ..:: ::.: ::::.:.::. :. ...: . : NP_067 SNLRSHMRIHTLDKPFVCRFCNRRFSQSSTLRNHVRLHTGERPYKCQVCQSAYSQLAGLR 260 270 280 290 300 310 580 590 pF1KE1 RHQRMPNECKPITESPESIEVD ::. . : : NP_067 AHQKSARHRPPSTALQAHSPALPAPHAHAPALAAAAAAAAAAAAHHLPAMVL 320 330 340 350 360 >>XP_016882236 (OMIM: 165260) PREDICTED: zinc finger and (327 aa) initn: 427 init1: 383 opt: 404 Z-score: 201.6 bits: 46.5 E(85289): 0.00017 Smith-Waterman score: 404; 31.3% identity (65.1% similar) in 195 aa overlap (396-584:106-299) 370 380 390 400 410 420 pF1KE1 DSYTSFFGIPLQCIAQDENLNVPSTVMEAMCRQDALQPFNKSSKLAP--TTQQRSVVFPQ ::. . :...: : :..:.. . XP_016 EKPPSEDKFDLVDAYGTEPPYTYSGKRSSKCRE-CRKMFQSASALEAHQKTHSRKTPYAC 80 90 100 110 120 130 430 440 450 460 470 pF1KE1 TPCSRNFSL---LDKSGPIESGFNQINVKN-QRVLASPTSTSQLHSEFSDWHLWKCGQCF . :.. :: : . ...: . . :. .... : .: . . . .:::.: XP_016 SECGKAFSRSTHLAQHQVVHTGAKPHECKECGKAFSRVTHLTQHQRIHTGEKPYKCGECG 140 150 160 170 180 190 480 490 500 510 520 530 pF1KE1 KTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFA :::.. : .: ... .:::.: :...::: ..: .: :....:.:: :::::. XP_016 KTFSRSTHLTQHQRVHTGERPYECDACGKAFSQSTHLTQHQRIHTGEKPYKCDACGRAFS 200 210 220 230 240 250 540 550 560 570 580 590 pF1KE1 GATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPESIEVD ..: :.: :.::::..:. : ..:.:...: .:::. . :: XP_016 DCSALIRHLRIHSGEKPYQCKVCPKAFAQSSSLIEHQRIHTGEKPYKCSDCGKAFSRSSA 260 270 280 290 300 310 XP_016 LMVHLRIHITVLQ 320 >>XP_011525220 (OMIM: 165260) PREDICTED: zinc finger and (327 aa) initn: 427 init1: 383 opt: 404 Z-score: 201.6 bits: 46.5 E(85289): 0.00017 Smith-Waterman score: 404; 31.3% identity (65.1% similar) in 195 aa overlap (396-584:106-299) 370 380 390 400 410 420 pF1KE1 DSYTSFFGIPLQCIAQDENLNVPSTVMEAMCRQDALQPFNKSSKLAP--TTQQRSVVFPQ ::. . :...: : :..:.. . XP_011 EKPPSEDKFDLVDAYGTEPPYTYSGKRSSKCRE-CRKMFQSASALEAHQKTHSRKTPYAC 80 90 100 110 120 130 430 440 450 460 470 pF1KE1 TPCSRNFSL---LDKSGPIESGFNQINVKN-QRVLASPTSTSQLHSEFSDWHLWKCGQCF . :.. :: : . ...: . . :. .... : .: . . . .:::.: XP_011 SECGKAFSRSTHLAQHQVVHTGAKPHECKECGKAFSRVTHLTQHQRIHTGEKPYKCGECG 140 150 160 170 180 190 480 490 500 510 520 530 pF1KE1 KTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFA :::.. : .: ... .:::.: :...::: ..: .: :....:.:: :::::. XP_011 KTFSRSTHLTQHQRVHTGERPYECDACGKAFSQSTHLTQHQRIHTGEKPYKCDACGRAFS 200 210 220 230 240 250 540 550 560 570 580 590 pF1KE1 GATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPESIEVD ..: :.: :.::::..:. : ..:.:...: .:::. . :: XP_011 DCSALIRHLRIHSGEKPYQCKVCPKAFAQSSSLIEHQRIHTGEKPYKCSDCGKAFSRSSA 260 270 280 290 300 310 XP_011 LMVHLRIHITVLQ 320 >>NP_001166122 (OMIM: 601276) zinc finger protein 177 is (481 aa) initn: 693 init1: 332 opt: 404 Z-score: 199.7 bits: 46.7 E(85289): 0.00022 Smith-Waterman score: 411; 26.8% identity (58.1% similar) in 339 aa overlap (257-584:77-395) 230 240 250 260 270 280 pF1KE1 SAAAAAPPPELPEWLRDLPREVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLPPEK :. : :: . : . : . . . .. NP_001 FRNLASVGYQLCRHSLISKVDQEQLKTDERGILQGDCADWETQ----LKPKDTIAM--QN 50 60 70 80 90 100 290 300 310 320 330 340 pF1KE1 VQAGAVRNTQHLWEIYDQDGTLQHFIDGGEPSK-SSWMRYIRCARHC-GEQNLTVVQYRS . .: . : . : .: : .: .. .. .: . :.: :.:.: ::. ..: : NP_001 IPGGKTSNGINTAE--NQPG--EHSLECNHCGKFRKNTRFI-CTRYCKGEKCYKYIKY-S 110 120 130 140 150 350 360 370 380 390 pF1KE1 NIF-----YRACIDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPS--TVME-AMC ..: :. ..: : . : ..: .: : . ..: .:. .: .: NP_001 KVFNHPSTLRSHVSIHIGEKTLE-FTDCRKAFN----QESSLRKHLRTPTGQKFQEYEQC 160 170 180 190 200 400 410 420 430 440 450 pF1KE1 RQD-ALQPFNKSSKLAPTTQQRSVVFPQTPCSRNFSLLDKSGPIESGFNQINVKNQRVLA .. .:. . . :: .. . : .:. :.: .: :. . : ....... NP_001 DMSFSLHSSCSVREQIPTGEKGDECSDYGKIS-PLSVHTKTGSVEEGL-ECN-EHEKTFT 210 220 230 240 250 260 460 470 480 490 500 510 pF1KE1 SPTSTSQLHSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSE .: : .. : ..:..: :.: . :. :. ... ..::.: ::..:::: :. NP_001 DPLSLQNCVRTHSGEMPYECSDCGKAFIFQSSLKKHMRSHTGEKPYECDHCGKSFSQSSH 270 280 290 300 310 320 520 530 540 550 560 570 pF1KE1 LRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRH : : ::....:. : ::.::. ..:..:.::::::::..: : ..: . ..:..: NP_001 LNVHKRTHTGEKPYDCKECGKAFTVPSSLQKHVRTHTGEKPYECSDCGKAFIDQSSLKKH 330 340 350 360 370 380 580 590 pF1KE1 QRMPNECKPITESPESIEVD : . :: NP_001 TRSHTGEKPYECNQCGKSFSTGSYLIVHKRTHTGEKTYECKECGKAFRNSSCLRVHVRTH 390 400 410 420 430 440 >>XP_006723255 (OMIM: 165260) PREDICTED: zinc finger and (491 aa) initn: 528 init1: 383 opt: 404 Z-score: 199.6 bits: 46.7 E(85289): 0.00022 Smith-Waterman score: 404; 31.3% identity (65.1% similar) in 195 aa overlap (396-584:270-463) 370 380 390 400 410 420 pF1KE1 DSYTSFFGIPLQCIAQDENLNVPSTVMEAMCRQDALQPFNKSSKLAP--TTQQRSVVFPQ ::. . :...: : :..:.. . XP_006 EKPPSEDKFDLVDAYGTEPPYTYSGKRSSKCRE-CRKMFQSASALEAHQKTHSRKTPYAC 240 250 260 270 280 290 430 440 450 460 470 pF1KE1 TPCSRNFSL---LDKSGPIESGFNQINVKN-QRVLASPTSTSQLHSEFSDWHLWKCGQCF . :.. :: : . ...: . . :. .... : .: . . . .:::.: XP_006 SECGKAFSRSTHLAQHQVVHTGAKPHECKECGKAFSRVTHLTQHQRIHTGEKPYKCGECG 300 310 320 330 340 350 480 490 500 510 520 530 pF1KE1 KTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFA :::.. : .: ... .:::.: :...::: ..: .: :....:.:: :::::. XP_006 KTFSRSTHLTQHQRVHTGERPYECDACGKAFSQSTHLTQHQRIHTGEKPYKCDACGRAFS 360 370 380 390 400 410 540 550 560 570 580 590 pF1KE1 GATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPESIEVD ..: :.: :.::::..:. : ..:.:...: .:::. . :: XP_006 DCSALIRHLRIHSGEKPYQCKVCPKAFAQSSSLIEHQRIHTGEKPYKCSDCGKAFSRSSA 420 430 440 450 460 470 XP_006 LMVHLRIHITVLQ 480 490 >>XP_011525219 (OMIM: 165260) PREDICTED: zinc finger and (491 aa) initn: 528 init1: 383 opt: 404 Z-score: 199.6 bits: 46.7 E(85289): 0.00022 Smith-Waterman score: 404; 31.3% identity (65.1% similar) in 195 aa overlap (396-584:270-463) 370 380 390 400 410 420 pF1KE1 DSYTSFFGIPLQCIAQDENLNVPSTVMEAMCRQDALQPFNKSSKLAP--TTQQRSVVFPQ ::. . :...: : :..:.. . XP_011 EKPPSEDKFDLVDAYGTEPPYTYSGKRSSKCRE-CRKMFQSASALEAHQKTHSRKTPYAC 240 250 260 270 280 290 430 440 450 460 470 pF1KE1 TPCSRNFSL---LDKSGPIESGFNQINVKN-QRVLASPTSTSQLHSEFSDWHLWKCGQCF . :.. :: : . ...: . . :. .... : .: . . . .:::.: XP_011 SECGKAFSRSTHLAQHQVVHTGAKPHECKECGKAFSRVTHLTQHQRIHTGEKPYKCGECG 300 310 320 330 340 350 480 490 500 510 520 530 pF1KE1 KTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFA :::.. : .: ... .:::.: :...::: ..: .: :....:.:: :::::. XP_011 KTFSRSTHLTQHQRVHTGERPYECDACGKAFSQSTHLTQHQRIHTGEKPYKCDACGRAFS 360 370 380 390 400 410 540 550 560 570 580 590 pF1KE1 GATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPESIEVD ..: :.: :.::::..:. : ..:.:...: .:::. . :: XP_011 DCSALIRHLRIHSGEKPYQCKVCPKAFAQSSSLIEHQRIHTGEKPYKCSDCGKAFSRSSA 420 430 440 450 460 470 XP_011 LMVHLRIHITVLQ 480 490 >>NP_001308045 (OMIM: 165260) zinc finger and SCAN domai (491 aa) initn: 528 init1: 383 opt: 404 Z-score: 199.6 bits: 46.7 E(85289): 0.00022 Smith-Waterman score: 404; 31.3% identity (65.1% similar) in 195 aa overlap (396-584:270-463) 370 380 390 400 410 420 pF1KE1 DSYTSFFGIPLQCIAQDENLNVPSTVMEAMCRQDALQPFNKSSKLAP--TTQQRSVVFPQ ::. . :...: : :..:.. . NP_001 EKPPSEDKFDLVDAYGTEPPYTYSGKRSSKCRE-CRKMFQSASALEAHQKTHSRKTPYAC 240 250 260 270 280 290 430 440 450 460 470 pF1KE1 TPCSRNFSL---LDKSGPIESGFNQINVKN-QRVLASPTSTSQLHSEFSDWHLWKCGQCF . :.. :: : . ...: . . :. .... : .: . . . .:::.: NP_001 SECGKAFSRSTHLAQHQVVHTGAKPHECKECGKAFSRVTHLTQHQRIHTGEKPYKCGECG 300 310 320 330 340 350 480 490 500 510 520 530 pF1KE1 KTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFA :::.. : .: ... .:::.: :...::: ..: .: :....:.:: :::::. NP_001 KTFSRSTHLTQHQRVHTGERPYECDACGKAFSQSTHLTQHQRIHTGEKPYKCDACGRAFS 360 370 380 390 400 410 540 550 560 570 580 590 pF1KE1 GATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPESIEVD ..: :.: :.::::..:. : ..:.:...: .:::. . :: NP_001 DCSALIRHLRIHSGEKPYQCKVCPKAFAQSSSLIEHQRIHTGEKPYKCSDCGKAFSRSSA 420 430 440 450 460 470 NP_001 LMVHLRIHITVLQ 480 490 >>NP_862829 (OMIM: 165260) zinc finger and SCAN domain-c (491 aa) initn: 528 init1: 383 opt: 404 Z-score: 199.6 bits: 46.7 E(85289): 0.00022 Smith-Waterman score: 404; 31.3% identity (65.1% similar) in 195 aa overlap (396-584:270-463) 370 380 390 400 410 420 pF1KE1 DSYTSFFGIPLQCIAQDENLNVPSTVMEAMCRQDALQPFNKSSKLAP--TTQQRSVVFPQ ::. . :...: : :..:.. . NP_862 EKPPSEDKFDLVDAYGTEPPYTYSGKRSSKCRE-CRKMFQSASALEAHQKTHSRKTPYAC 240 250 260 270 280 290 430 440 450 460 470 pF1KE1 TPCSRNFSL---LDKSGPIESGFNQINVKN-QRVLASPTSTSQLHSEFSDWHLWKCGQCF . :.. :: : . ...: . . :. .... : .: . . . .:::.: NP_862 SECGKAFSRSTHLAQHQVVHTGAKPHECKECGKAFSRVTHLTQHQRIHTGEKPYKCGECG 300 310 320 330 340 350 480 490 500 510 520 530 pF1KE1 KTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFA :::.. : .: ... .:::.: :...::: ..: .: :....:.:: :::::. NP_862 KTFSRSTHLTQHQRVHTGERPYECDACGKAFSQSTHLTQHQRIHTGEKPYKCDACGRAFS 360 370 380 390 400 410 540 550 560 570 580 590 pF1KE1 GATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPESIEVD ..: :.: :.::::..:. : ..:.:...: .:::. . :: NP_862 DCSALIRHLRIHSGEKPYQCKVCPKAFAQSSSLIEHQRIHTGEKPYKCSDCGKAFSRSSA 420 430 440 450 460 470 NP_862 LMVHLRIHITVLQ 480 490 595 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Nov 3 03:48:33 2016 done: Thu Nov 3 03:48:35 2016 Total Scan time: 13.460 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]