FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4323, 326 aa 1>>>pF1KE4323 326 - 326 aa - 326 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.4948+/-0.000833; mu= -4.5948+/- 0.051 mean_var=334.4004+/-67.327, 0's: 0 Z-trim(118.6): 9 B-trim: 0 in 0/54 Lambda= 0.070136 statistics sampled from 19539 (19547) to 19539 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.848), E-opt: 0.2 (0.6), width: 16 Scan time: 3.530 The best scores are: opt bits E(32554) CCDS12534.2 ZFP36 gene_id:7538|Hs108|chr19 ( 332) 2313 246.6 2e-65 >>CCDS12534.2 ZFP36 gene_id:7538|Hs108|chr19 (332 aa) initn: 2313 init1: 2313 opt: 2313 Z-score: 1288.0 bits: 246.6 E(32554): 2e-65 Smith-Waterman score: 2313; 100.0% identity (100.0% similar) in 326 aa overlap (1-326:7-332) 10 20 30 40 50 pF1KE4 MDLTAIYESLLSLSPDVPVPSDHGGTESSPGWGSSGPWSLSPSDSSPSGVTSRL :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MANRYTMDLTAIYESLLSLSPDVPVPSDHGGTESSPGWGSSGPWSLSPSDSSPSGVTSRL 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 PGRSTSLVEGRSCGWVPPPPGFAPLAPRLGPELSPSPTSPTATSTTPSRYKTELCRTFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 PGRSTSLVEGRSCGWVPPPPGFAPLAPRLGPELSPSPTSPTATSTTPSRYKTELCRTFSE 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE4 SGRCRYGAKCQFAHGLGELRQANRHPKYKTELCHKFYLQGRCPYGSRCHFIHNPSEDLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 SGRCRYGAKCQFAHGLGELRQANRHPKYKTELCHKFYLQGRCPYGSRCHFIHNPSEDLAA 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE4 PGHPPVLRQSISFSGLPSGRRTSPPPPGLAGPSLSSSSFSPSSSPPPPGDLPLSPSAFSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 PGHPPVLRQSISFSGLPSGRRTSPPPPGLAGPSLSSSSFSPSSSPPPPGDLPLSPSAFSA 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE4 APGTPLARRDPTPVCCPSCRRATPISVWGPLGGLVRTPSVQSLGSDPDEYASSGSSLGGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 APGTPLARRDPTPVCCPSCRRATPISVWGPLGGLVRTPSVQSLGSDPDEYASSGSSLGGS 250 260 270 280 290 300 300 310 320 pF1KE4 DSPVFEAGVFAPPQPVAAPRRLPIFNRISVSE :::::::::::::::::::::::::::::::: CCDS12 DSPVFEAGVFAPPQPVAAPRRLPIFNRISVSE 310 320 330 326 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Nov 3 06:44:33 2016 done: Thu Nov 3 06:44:34 2016 Total Scan time: 3.530 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]