FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3155, 373 aa 1>>>pF1KE3155 373 - 373 aa - 373 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0749+/-0.00104; mu= 12.0096+/- 0.063 mean_var=61.8609+/-12.407, 0's: 0 Z-trim(102.8): 20 B-trim: 0 in 0/49 Lambda= 0.163067 statistics sampled from 7101 (7106) to 7101 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.586), E-opt: 0.2 (0.218), width: 16 Scan time: 2.550 The best scores are: opt bits E(32554) CCDS42063.1 HYKK gene_id:123688|Hs108|chr15 ( 373) 2437 582.1 2.6e-166 CCDS45318.1 HYKK gene_id:123688|Hs108|chr15 ( 220) 1420 342.9 1.6e-94 >>CCDS42063.1 HYKK gene_id:123688|Hs108|chr15 (373 aa) initn: 2437 init1: 2437 opt: 2437 Z-score: 3099.3 bits: 582.1 E(32554): 2.6e-166 Smith-Waterman score: 2437; 100.0% identity (100.0% similar) in 373 aa overlap (1-373:1-373) 10 20 30 40 50 60 pF1KE3 MSSGNYQQSEALSKPTFSEEQASALVESVFGLKVSKVRPLPSYDDQNFHVYVSKTKDGPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MSSGNYQQSEALSKPTFSEEQASALVESVFGLKVSKVRPLPSYDDQNFHVYVSKTKDGPT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EYVLKISNTKASKNPDLIEVQNHIIMFLKAAGFPTASVCHTKGDNTASLVSVDSGSEIKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 EYVLKISNTKASKNPDLIEVQNHIIMFLKAAGFPTASVCHTKGDNTASLVSVDSGSEIKS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 YLVRLLTYLPGRPIAELPVSPQLLYEIGKLAAKLDKTLQRFHHPKLSSLHRENFIWNLKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 YLVRLLTYLPGRPIAELPVSPQLLYEIGKLAAKLDKTLQRFHHPKLSSLHRENFIWNLKN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 VPLLEKYLYALGQNRNREIVEHVIHLFKEEVMTKLSHFRECINHGDLNDHNILIESSKSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 VPLLEKYLYALGQNRNREIVEHVIHLFKEEVMTKLSHFRECINHGDLNDHNILIESSKSA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 SGNAEYQVSGILDFGDMSYGYYVFEVAITIMYMMIESKSPIQVGGHVLAGFESITPLTAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 SGNAEYQVSGILDFGDMSYGYYVFEVAITIMYMMIESKSPIQVGGHVLAGFESITPLTAV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 EKGALFLLVCSRFCQSLVMAAYSCQLYPENKDYLMVTAKTGWKHLQQMFDMGQKAVEEIW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 EKGALFLLVCSRFCQSLVMAAYSCQLYPENKDYLMVTAKTGWKHLQQMFDMGQKAVEEIW 310 320 330 340 350 360 370 pF1KE3 FETAKSYESGISM ::::::::::::: CCDS42 FETAKSYESGISM 370 >>CCDS45318.1 HYKK gene_id:123688|Hs108|chr15 (220 aa) initn: 1420 init1: 1420 opt: 1420 Z-score: 1810.4 bits: 342.9 E(32554): 1.6e-94 Smith-Waterman score: 1420; 100.0% identity (100.0% similar) in 220 aa overlap (1-220:1-220) 10 20 30 40 50 60 pF1KE3 MSSGNYQQSEALSKPTFSEEQASALVESVFGLKVSKVRPLPSYDDQNFHVYVSKTKDGPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MSSGNYQQSEALSKPTFSEEQASALVESVFGLKVSKVRPLPSYDDQNFHVYVSKTKDGPT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EYVLKISNTKASKNPDLIEVQNHIIMFLKAAGFPTASVCHTKGDNTASLVSVDSGSEIKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 EYVLKISNTKASKNPDLIEVQNHIIMFLKAAGFPTASVCHTKGDNTASLVSVDSGSEIKS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 YLVRLLTYLPGRPIAELPVSPQLLYEIGKLAAKLDKTLQRFHHPKLSSLHRENFIWNLKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 YLVRLLTYLPGRPIAELPVSPQLLYEIGKLAAKLDKTLQRFHHPKLSSLHRENFIWNLKN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 VPLLEKYLYALGQNRNREIVEHVIHLFKEEVMTKLSHFRECINHGDLNDHNILIESSKSA :::::::::::::::::::::::::::::::::::::::: CCDS45 VPLLEKYLYALGQNRNREIVEHVIHLFKEEVMTKLSHFRE 190 200 210 220 250 260 270 280 290 300 pF1KE3 SGNAEYQVSGILDFGDMSYGYYVFEVAITIMYMMIESKSPIQVGGHVLAGFESITPLTAV 373 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Nov 3 18:15:54 2016 done: Thu Nov 3 18:15:55 2016 Total Scan time: 2.550 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]