FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3206, 476 aa 1>>>pF1KE3206 476 - 476 aa - 476 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.9110+/-0.00144; mu= 4.8882+/- 0.084 mean_var=179.0721+/-36.933, 0's: 0 Z-trim(105.5): 137 B-trim: 312 in 1/49 Lambda= 0.095843 statistics sampled from 8311 (8459) to 8311 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.623), E-opt: 0.2 (0.26), width: 16 Scan time: 3.010 The best scores are: opt bits E(32554) CCDS2208.1 WDSUB1 gene_id:151525|Hs108|chr2 ( 476) 3239 461.0 1.2e-129 CCDS82525.1 WDSUB1 gene_id:151525|Hs108|chr2 ( 429) 2612 374.3 1.4e-103 CCDS77477.1 WDSUB1 gene_id:151525|Hs108|chr2 ( 384) 1595 233.6 2.8e-61 >>CCDS2208.1 WDSUB1 gene_id:151525|Hs108|chr2 (476 aa) initn: 3239 init1: 3239 opt: 3239 Z-score: 2440.9 bits: 461.0 E(32554): 1.2e-129 Smith-Waterman score: 3239; 100.0% identity (100.0% similar) in 476 aa overlap (1-476:1-476) 10 20 30 40 50 60 pF1KE3 MVKLIHTLADHGDDVNCCAFSFSLLATCSLDKTIRLYSLRDFTELPHSPLKFHTYAVHCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 MVKLIHTLADHGDDVNCCAFSFSLLATCSLDKTIRLYSLRDFTELPHSPLKFHTYAVHCC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 CFSPSGHILASCSTDGTTVLWNTENGQMLAVMEQPSGSPVRVCQFSPDSTCLASGAADGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 CFSPSGHILASCSTDGTTVLWNTENGQMLAVMEQPSGSPVRVCQFSPDSTCLASGAADGT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 VVLWNAQSYKLYRCGSVKDGSLAACAFSPNGSFFVTGSSCGDLTVWDDKMRCLHSEKAHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 VVLWNAQSYKLYRCGSVKDGSLAACAFSPNGSFFVTGSSCGDLTVWDDKMRCLHSEKAHD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 LGITCCDFSSQPVSDGEQGLQFFRLASCGQDCQVKIWIVSFTHILGFELKYKSTLSGHCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 LGITCCDFSSQPVSDGEQGLQFFRLASCGQDCQVKIWIVSFTHILGFELKYKSTLSGHCA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 PVLACAFSHDGQMLVSGSVDKSVIVYDTNTENILHTLTQHTRYVTTCAFAPNTLLLATGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 PVLACAFSHDGQMLVSGSVDKSVIVYDTNTENILHTLTQHTRYVTTCAFAPNTLLLATGS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 MDKTVNIWQFDLETLCQARRTEHQLKQFTEDWSEEDVSTWLCAQDLKDLVGIFKMNNIDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 MDKTVNIWQFDLETLCQARRTEHQLKQFTEDWSEEDVSTWLCAQDLKDLVGIFKMNNIDG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 KELLNLTKESLADDLKIESLGLRSKVLRKIEELRTKVKSLSSGIPDEFICPITRELMKDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 KELLNLTKESLADDLKIESLGLRSKVLRKIEELRTKVKSLSSGIPDEFICPITRELMKDP 370 380 390 400 410 420 430 440 450 460 470 pF1KE3 VIASDGYSYEKEAMENWISKKKRTSPMTNLVLPSAVLTPNRTLKMAINRWLETHQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 VIASDGYSYEKEAMENWISKKKRTSPMTNLVLPSAVLTPNRTLKMAINRWLETHQK 430 440 450 460 470 >>CCDS82525.1 WDSUB1 gene_id:151525|Hs108|chr2 (429 aa) initn: 2805 init1: 2606 opt: 2612 Z-score: 1972.9 bits: 374.3 E(32554): 1.4e-103 Smith-Waterman score: 2842; 90.1% identity (90.1% similar) in 476 aa overlap (1-476:1-429) 10 20 30 40 50 60 pF1KE3 MVKLIHTLADHGDDVNCCAFSFSLLATCSLDKTIRLYSLRDFTELPHSPLKFHTYAVHCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 MVKLIHTLADHGDDVNCCAFSFSLLATCSLDKTIRLYSLRDFTELPHSPLKFHTYAVHCC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 CFSPSGHILASCSTDGTTVLWNTENGQMLAVMEQPSGSPVRVCQFSPDSTCLASGAADGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 CFSPSGHILASCSTDGTTVLWNTENGQMLAVMEQPSGSPVRVCQFSPDSTCLASGAADGT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 VVLWNAQSYKLYRCGSVKDGSLAACAFSPNGSFFVTGSSCGDLTVWDDKMRCLHSEKAHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 VVLWNAQSYKLYRCGSVKDGSLAACAFSPNGSFFVTGSSCGDLTVWDDKMRCLHSEKAHD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 LGITCCDFSSQPVSDGEQGLQFFRLASCGQDCQVKIWIVSFTHILGFELKYKSTLSGHCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 LGITCCDFSSQPVSDGEQGLQFFRLASCGQDCQVKIWIVSFTHILGFELKYKSTLSGHCA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 PVLACAFSHDGQMLVSGSVDKSVIVYDTNTENILHTLTQHTRYVTTCAFAPNTLLLATGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 PVLACAFSHDGQMLVSGSVDKSVIVYDTNTENILHTLTQHTRYVTTCAFAPNTLLLATGS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 MDKTVNIWQFDLETLCQARRTEHQLKQFTEDWSEEDVSTWLCAQDLKDLVGIFKMNNIDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 MDKTVNIWQFDLETLCQARRTEHQLKQFTEDWSEEDVSTWLCAQDLKDLVGIFKMNNIDG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 KELLNLTKESLADDLKIESLGLRSKVLRKIEELRTKVKSLSSGIPDEFICPITRELMKDP ::::::::::::::::: CCDS82 KELLNLTKESLADDLKI------------------------------------------- 370 430 440 450 460 470 pF1KE3 VIASDGYSYEKEAMENWISKKKRTSPMTNLVLPSAVLTPNRTLKMAINRWLETHQK :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 ----DGYSYEKEAMENWISKKKRTSPMTNLVLPSAVLTPNRTLKMAINRWLETHQK 380 390 400 410 420 >>CCDS77477.1 WDSUB1 gene_id:151525|Hs108|chr2 (384 aa) initn: 1686 init1: 1595 opt: 1595 Z-score: 1213.6 bits: 233.6 E(32554): 2.8e-61 Smith-Waterman score: 2433; 80.7% identity (80.7% similar) in 476 aa overlap (1-476:1-384) 10 20 30 40 50 60 pF1KE3 MVKLIHTLADHGDDVNCCAFSFSLLATCSLDKTIRLYSLRDFTELPHSPLKFHTYAVHCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 MVKLIHTLADHGDDVNCCAFSFSLLATCSLDKTIRLYSLRDFTELPHSPLKFHTYAVHCC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 CFSPSGHILASCSTDGTTVLWNTENGQMLAVMEQPSGSPVRVCQFSPDSTCLASGAADGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 CFSPSGHILASCSTDGTTVLWNTENGQMLAVMEQPSGSPVRVCQFSPDSTCLASGAADGT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 VVLWNAQSYKLYRCGSVKDGSLAACAFSPNGSFFVTGSSCGDLTVWDDKMRCLHSEKAHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 VVLWNAQSYKLYRCGSVKDGSLAACAFSPNGSFFVTGSSCGDLTVWDDKMRCLHSEKAHD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 LGITCCDFSSQPVSDGEQGLQFFRLASCGQDCQVKIWIVSFTHILGFELKYKSTLSGHCA ::::::::::::::::::::::::::::::::::::::::::::: CCDS77 LGITCCDFSSQPVSDGEQGLQFFRLASCGQDCQVKIWIVSFTHIL--------------- 190 200 210 220 250 260 270 280 290 300 pF1KE3 PVLACAFSHDGQMLVSGSVDKSVIVYDTNTENILHTLTQHTRYVTTCAFAPNTLLLATGS CCDS77 ------------------------------------------------------------ 310 320 330 340 350 360 pF1KE3 MDKTVNIWQFDLETLCQARRTEHQLKQFTEDWSEEDVSTWLCAQDLKDLVGIFKMNNIDG ::::::::::::::::::::::::::::::::::::::::::: CCDS77 -----------------ARRTEHQLKQFTEDWSEEDVSTWLCAQDLKDLVGIFKMNNIDG 230 240 250 260 370 380 390 400 410 420 pF1KE3 KELLNLTKESLADDLKIESLGLRSKVLRKIEELRTKVKSLSSGIPDEFICPITRELMKDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 KELLNLTKESLADDLKIESLGLRSKVLRKIEELRTKVKSLSSGIPDEFICPITRELMKDP 270 280 290 300 310 320 430 440 450 460 470 pF1KE3 VIASDGYSYEKEAMENWISKKKRTSPMTNLVLPSAVLTPNRTLKMAINRWLETHQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 VIASDGYSYEKEAMENWISKKKRTSPMTNLVLPSAVLTPNRTLKMAINRWLETHQK 330 340 350 360 370 380 476 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Nov 3 19:41:35 2016 done: Thu Nov 3 19:41:36 2016 Total Scan time: 3.010 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]