FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3509, 580 aa 1>>>pF1KE3509 580 - 580 aa - 580 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3326+/-0.00078; mu= 19.2272+/- 0.047 mean_var=73.7681+/-14.979, 0's: 0 Z-trim(108.9): 46 B-trim: 215 in 1/53 Lambda= 0.149328 statistics sampled from 10473 (10514) to 10473 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.694), E-opt: 0.2 (0.323), width: 16 Scan time: 3.230 The best scores are: opt bits E(32554) CCDS5698.1 FBXO24 gene_id:26261|Hs108|chr7 ( 580) 4008 872.8 0 CCDS5699.2 FBXO24 gene_id:26261|Hs108|chr7 ( 618) 3930 856.0 0 CCDS55138.1 FBXO24 gene_id:26261|Hs108|chr7 ( 568) 3923 854.5 0 >>CCDS5698.1 FBXO24 gene_id:26261|Hs108|chr7 (580 aa) initn: 4008 init1: 4008 opt: 4008 Z-score: 4663.4 bits: 872.8 E(32554): 0 Smith-Waterman score: 4008; 100.0% identity (100.0% similar) in 580 aa overlap (1-580:1-580) 10 20 30 40 50 60 pF1KE3 MGEKAVPLLRRRRVKRSCPSCGSELGVEEKRGKGNPISIQLFPPELVEHIISFLPVRDLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 MGEKAVPLLRRRRVKRSCPSCGSELGVEEKRGKGNPISIQLFPPELVEHIISFLPVRDLV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ALGQTCRYFHEVCDGEGVWRRICRRLSPRLQDQGSGVRPWKRAAILNYTKGLYFQAFGGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 ALGQTCRYFHEVCDGEGVWRRICRRLSPRLQDQGSGVRPWKRAAILNYTKGLYFQAFGGR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 RRCLSKSVAPLLAHGYRRFLPTKDHVFILDYVGTLFFLKNALVSTLGQMQWKRACRYVVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 RRCLSKSVAPLLAHGYRRFLPTKDHVFILDYVGTLFFLKNALVSTLGQMQWKRACRYVVL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 CRGAKDFASDPRCDTVYRKYLYVLATREPQEVVGTTSSRACDCVEVYLQSSGQRVFKMTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 CRGAKDFASDPRCDTVYRKYLYVLATREPQEVVGTTSSRACDCVEVYLQSSGQRVFKMTF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 HHSMTFKQIVLVGQETQRALLLLTEEGKIYSLVVNETQLDQPRSYTVQLALRKVSHYLPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 HHSMTFKQIVLVGQETQRALLLLTEEGKIYSLVVNETQLDQPRSYTVQLALRKVSHYLPH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 LRVACMTSNQSSTLYVTDQGGVYFEVHTPGVYRDLFGTLQAFDPLDQQMPLALSLPAKIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 LRVACMTSNQSSTLYVTDQGGVYFEVHTPGVYRDLFGTLQAFDPLDQQMPLALSLPAKIL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 FCALGYNHLGLVDEFGRIFMQGNNRYGQLGTGDKMDRGEPTQVCYLQRPITLWCGLNHSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 FCALGYNHLGLVDEFGRIFMQGNNRYGQLGTGDKMDRGEPTQVCYLQRPITLWCGLNHSL 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 VLSQSSEFSKELLGCGCGAGGRLPGWPKGSASFVKLQVKVPLCACALCATRECLYILSSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 VLSQSSEFSKELLGCGCGAGGRLPGWPKGSASFVKLQVKVPLCACALCATRECLYILSSH 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 DIEQHAPYRHLPASRVVGTPEPSLGARAPQDPGGMAQACEEYLSQIHSCQTLQDRTEKMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 DIEQHAPYRHLPASRVVGTPEPSLGARAPQDPGGMAQACEEYLSQIHSCQTLQDRTEKMK 490 500 510 520 530 540 550 560 570 580 pF1KE3 EIVGWMPLMAAQKDFFWEALDMLQRAEGGGGGVGPPAPET :::::::::::::::::::::::::::::::::::::::: CCDS56 EIVGWMPLMAAQKDFFWEALDMLQRAEGGGGGVGPPAPET 550 560 570 580 >>CCDS5699.2 FBXO24 gene_id:26261|Hs108|chr7 (618 aa) initn: 3930 init1: 3930 opt: 3930 Z-score: 4572.2 bits: 856.0 E(32554): 0 Smith-Waterman score: 3930; 100.0% identity (100.0% similar) in 568 aa overlap (13-580:51-618) 10 20 30 40 pF1KE3 MGEKAVPLLRRRRVKRSCPSCGSELGVEEKRGKGNPISIQLF :::::::::::::::::::::::::::::: CCDS56 SREGAIRMVRGSQRRKLQKFTRLCGREEGLRVKRSCPSCGSELGVEEKRGKGNPISIQLF 30 40 50 60 70 80 50 60 70 80 90 100 pF1KE3 PPELVEHIISFLPVRDLVALGQTCRYFHEVCDGEGVWRRICRRLSPRLQDQGSGVRPWKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 PPELVEHIISFLPVRDLVALGQTCRYFHEVCDGEGVWRRICRRLSPRLQDQGSGVRPWKR 90 100 110 120 130 140 110 120 130 140 150 160 pF1KE3 AAILNYTKGLYFQAFGGRRRCLSKSVAPLLAHGYRRFLPTKDHVFILDYVGTLFFLKNAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 AAILNYTKGLYFQAFGGRRRCLSKSVAPLLAHGYRRFLPTKDHVFILDYVGTLFFLKNAL 150 160 170 180 190 200 170 180 190 200 210 220 pF1KE3 VSTLGQMQWKRACRYVVLCRGAKDFASDPRCDTVYRKYLYVLATREPQEVVGTTSSRACD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 VSTLGQMQWKRACRYVVLCRGAKDFASDPRCDTVYRKYLYVLATREPQEVVGTTSSRACD 210 220 230 240 250 260 230 240 250 260 270 280 pF1KE3 CVEVYLQSSGQRVFKMTFHHSMTFKQIVLVGQETQRALLLLTEEGKIYSLVVNETQLDQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 CVEVYLQSSGQRVFKMTFHHSMTFKQIVLVGQETQRALLLLTEEGKIYSLVVNETQLDQP 270 280 290 300 310 320 290 300 310 320 330 340 pF1KE3 RSYTVQLALRKVSHYLPHLRVACMTSNQSSTLYVTDQGGVYFEVHTPGVYRDLFGTLQAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 RSYTVQLALRKVSHYLPHLRVACMTSNQSSTLYVTDQGGVYFEVHTPGVYRDLFGTLQAF 330 340 350 360 370 380 350 360 370 380 390 400 pF1KE3 DPLDQQMPLALSLPAKILFCALGYNHLGLVDEFGRIFMQGNNRYGQLGTGDKMDRGEPTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 DPLDQQMPLALSLPAKILFCALGYNHLGLVDEFGRIFMQGNNRYGQLGTGDKMDRGEPTQ 390 400 410 420 430 440 410 420 430 440 450 460 pF1KE3 VCYLQRPITLWCGLNHSLVLSQSSEFSKELLGCGCGAGGRLPGWPKGSASFVKLQVKVPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 VCYLQRPITLWCGLNHSLVLSQSSEFSKELLGCGCGAGGRLPGWPKGSASFVKLQVKVPL 450 460 470 480 490 500 470 480 490 500 510 520 pF1KE3 CACALCATRECLYILSSHDIEQHAPYRHLPASRVVGTPEPSLGARAPQDPGGMAQACEEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 CACALCATRECLYILSSHDIEQHAPYRHLPASRVVGTPEPSLGARAPQDPGGMAQACEEY 510 520 530 540 550 560 530 540 550 560 570 580 pF1KE3 LSQIHSCQTLQDRTEKMKEIVGWMPLMAAQKDFFWEALDMLQRAEGGGGGVGPPAPET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 LSQIHSCQTLQDRTEKMKEIVGWMPLMAAQKDFFWEALDMLQRAEGGGGGVGPPAPET 570 580 590 600 610 >>CCDS55138.1 FBXO24 gene_id:26261|Hs108|chr7 (568 aa) initn: 3923 init1: 3923 opt: 3923 Z-score: 4564.6 bits: 854.5 E(32554): 0 Smith-Waterman score: 3923; 100.0% identity (100.0% similar) in 567 aa overlap (14-580:2-568) 10 20 30 40 50 60 pF1KE3 MGEKAVPLLRRRRVKRSCPSCGSELGVEEKRGKGNPISIQLFPPELVEHIISFLPVRDLV ::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 MVKRSCPSCGSELGVEEKRGKGNPISIQLFPPELVEHIISFLPVRDLV 10 20 30 40 70 80 90 100 110 120 pF1KE3 ALGQTCRYFHEVCDGEGVWRRICRRLSPRLQDQGSGVRPWKRAAILNYTKGLYFQAFGGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 ALGQTCRYFHEVCDGEGVWRRICRRLSPRLQDQGSGVRPWKRAAILNYTKGLYFQAFGGR 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 RRCLSKSVAPLLAHGYRRFLPTKDHVFILDYVGTLFFLKNALVSTLGQMQWKRACRYVVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 RRCLSKSVAPLLAHGYRRFLPTKDHVFILDYVGTLFFLKNALVSTLGQMQWKRACRYVVL 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE3 CRGAKDFASDPRCDTVYRKYLYVLATREPQEVVGTTSSRACDCVEVYLQSSGQRVFKMTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 CRGAKDFASDPRCDTVYRKYLYVLATREPQEVVGTTSSRACDCVEVYLQSSGQRVFKMTF 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE3 HHSMTFKQIVLVGQETQRALLLLTEEGKIYSLVVNETQLDQPRSYTVQLALRKVSHYLPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 HHSMTFKQIVLVGQETQRALLLLTEEGKIYSLVVNETQLDQPRSYTVQLALRKVSHYLPH 230 240 250 260 270 280 310 320 330 340 350 360 pF1KE3 LRVACMTSNQSSTLYVTDQGGVYFEVHTPGVYRDLFGTLQAFDPLDQQMPLALSLPAKIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 LRVACMTSNQSSTLYVTDQGGVYFEVHTPGVYRDLFGTLQAFDPLDQQMPLALSLPAKIL 290 300 310 320 330 340 370 380 390 400 410 420 pF1KE3 FCALGYNHLGLVDEFGRIFMQGNNRYGQLGTGDKMDRGEPTQVCYLQRPITLWCGLNHSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 FCALGYNHLGLVDEFGRIFMQGNNRYGQLGTGDKMDRGEPTQVCYLQRPITLWCGLNHSL 350 360 370 380 390 400 430 440 450 460 470 480 pF1KE3 VLSQSSEFSKELLGCGCGAGGRLPGWPKGSASFVKLQVKVPLCACALCATRECLYILSSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 VLSQSSEFSKELLGCGCGAGGRLPGWPKGSASFVKLQVKVPLCACALCATRECLYILSSH 410 420 430 440 450 460 490 500 510 520 530 540 pF1KE3 DIEQHAPYRHLPASRVVGTPEPSLGARAPQDPGGMAQACEEYLSQIHSCQTLQDRTEKMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 DIEQHAPYRHLPASRVVGTPEPSLGARAPQDPGGMAQACEEYLSQIHSCQTLQDRTEKMK 470 480 490 500 510 520 550 560 570 580 pF1KE3 EIVGWMPLMAAQKDFFWEALDMLQRAEGGGGGVGPPAPET :::::::::::::::::::::::::::::::::::::::: CCDS55 EIVGWMPLMAAQKDFFWEALDMLQRAEGGGGGVGPPAPET 530 540 550 560 580 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 02:13:23 2016 done: Sat Nov 5 02:13:24 2016 Total Scan time: 3.230 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]