Result of FASTA (ccds) for
pFN21AB5628
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5628, 1376 aa
1>>>pF1KB5628 1376 - 1376 aa - 1376 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.1433+/-0.000998; mu= 2.7131+/- 0.061
mean_var=265.6979+/-53.885, 0's: 0 Z-trim(113.3): 48 B-trim: 167 in 1/53
Lambda= 0.078683
statistics sampled from 13909 (13954) to 13909 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.733), E-opt: 0.2 (0.429), width: 16
Scan time: 5.700
The best scores are: opt bits E(32554)
CCDS3367.1 RGS12 gene_id:6002|Hs108|chr4 (1376) 9253 1064.6 0
CCDS3366.1 RGS12 gene_id:6002|Hs108|chr4 (1447) 9230 1062.0 0
CCDS3368.1 RGS12 gene_id:6002|Hs108|chr4 ( 799) 4680 545.4 2.4e-154
CCDS43405.1 RGS14 gene_id:10636|Hs108|chr5 ( 566) 704 93.9 1.3e-18
CCDS41572.1 RGS10 gene_id:6001|Hs108|chr10 ( 167) 487 68.9 1.3e-11
CCDS31294.1 RGS10 gene_id:6001|Hs108|chr10 ( 181) 487 69.0 1.4e-11
>>CCDS3367.1 RGS12 gene_id:6002|Hs108|chr4 (1376 aa)
initn: 9253 init1: 9253 opt: 9253 Z-score: 5686.6 bits: 1064.6 E(32554): 0
Smith-Waterman score: 9253; 100.0% identity (100.0% similar) in 1376 aa overlap (1-1376:1-1376)
10 20 30 40 50 60
pF1KB5 MFRAGEASKRPLPGPSPPRVRSVEVARGRAGYGFTLSGQAPCVLSCVMRGSPADFVGLRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MFRAGEASKRPLPGPSPPRVRSVEVARGRAGYGFTLSGQAPCVLSCVMRGSPADFVGLRA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GDQILAVNEINVKKASHEDVVKLIGKCSGVLHMVIAEGVGRFESCSSDEEGGLYEGKGWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 GDQILAVNEINVKKASHEDVVKLIGKCSGVLHMVIAEGVGRFESCSSDEEGGLYEGKGWL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KPKLDSKALGINRAERVVEEMQSGGIFNMIFENPSLCASNSEPLKLKQRSLSESAATRFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KPKLDSKALGINRAERVVEEMQSGGIFNMIFENPSLCASNSEPLKLKQRSLSESAATRFD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 VGHESINNPNPNMLSKEEISKVIHDDSVFSIGLESHDDFALDASILNVAMIVGYLGSIEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VGHESINNPNPNMLSKEEISKVIHDDSVFSIGLESHDDFALDASILNVAMIVGYLGSIEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 PSTSSNLESDSLQAIRGCMRRLRAEQKIHSLVTMKIMHDCVQLSTDKAGVVAEYPAEKLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 PSTSSNLESDSLQAIRGCMRRLRAEQKIHSLVTMKIMHDCVQLSTDKAGVVAEYPAEKLA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 FSAVCPDDRRFFGLVTMQTNDDGSLAQEEEGALRTSCHVFMVDPDLFNHKIHQGIARRFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 FSAVCPDDRRFFGLVTMQTNDDGSLAQEEEGALRTSCHVFMVDPDLFNHKIHQGIARRFG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 FECTADPDTNGCLEFPASSLPVLQFISVLYRDMGELIEGMRARAFLDGDADAHQNNSTSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 FECTADPDTNGCLEFPASSLPVLQFISVLYRDMGELIEGMRARAFLDGDADAHQNNSTSS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 NSDSGIGNFHQEEKSNRVLVVDLGGSSSRHGPGGSAWDGVGGRGAQPWGAPWTGPFCPDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 NSDSGIGNFHQEEKSNRVLVVDLGGSSSRHGPGGSAWDGVGGRGAQPWGAPWTGPFCPDP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 EGSPPFEAAHQTDRFWDLNKHLGPASPVEVPPASLRSSVPPSKRGTVGAGCGFNQRWLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EGSPPFEAAHQTDRFWDLNKHLGPASPVEVPPASLRSSVPPSKRGTVGAGCGFNQRWLPV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB5 HVLREWQCGHTSDQDSYTDSTDGWSSINCGTLPPPMSKIPADRYRVEGSFAQPPLNAPKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 HVLREWQCGHTSDQDSYTDSTDGWSSINCGTLPPPMSKIPADRYRVEGSFAQPPLNAPKR
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB5 EWSRKAFGMQSIFGPHRNVRKTKEDKKGSKFGRGTGLTQPSQRTSARRSFGRSKRFSITR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EWSRKAFGMQSIFGPHRNVRKTKEDKKGSKFGRGTGLTQPSQRTSARRSFGRSKRFSITR
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB5 SLDDLESATVSDGELTGADLKDCVSNNSLSSNASLPSVQSCRRLRERRVASWAVSFERLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SLDDLESATVSDGELTGADLKDCVSNNSLSSNASLPSVQSCRRLRERRVASWAVSFERLL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB5 QDPVGVRYFSDFLRKEFSEENILFWQACEYFNHVPAHDKKELSYRAREIFSKFLCSKATT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 QDPVGVRYFSDFLRKEFSEENILFWQACEYFNHVPAHDKKELSYRAREIFSKFLCSKATT
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB5 PVNIDSQAQLADDVLRAPHPDMFKEQQLQIFNLMKFDSYTRFLKSPLYQECILAEVEGRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 PVNIDSQAQLADDVLRAPHPDMFKEQQLQIFNLMKFDSYTRFLKSPLYQECILAEVEGRA
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB5 LPDSQQVPSSPASKHSLGSDHSSVSTPKKLSGKSKSGRSLNEELGDEDSEKKRKGAFFSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LPDSQQVPSSPASKHSLGSDHSSVSTPKKLSGKSKSGRSLNEELGDEDSEKKRKGAFFSW
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB5 SRTRSTGRSQKKREHGDHADDALHANGGLCRRESQGSVSSAGSLDLSEACRTLAPEKDKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SRTRSTGRSQKKREHGDHADDALHANGGLCRRESQGSVSSAGSLDLSEACRTLAPEKDKA
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB5 TKHCCIHLPDGTSCVVAVKAGFSIKDILSGLCERHGINGAAADLFLVGGDKPLVLHQDSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 TKHCCIHLPDGTSCVVAVKAGFSIKDILSGLCERHGINGAAADLFLVGGDKPLVLHQDSS
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB5 ILESRDLRLEKRTLFRLDLVPINRSVGLKAKPTKPVTEVLRPVVARYGLDLSGLLVRLSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ILESRDLRLEKRTLFRLDLVPINRSVGLKAKPTKPVTEVLRPVVARYGLDLSGLLVRLSG
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB5 EKEPLDLGAPISSLDGQRVVLEEKDPSRGKASADKQKGVPVKQNTAVNSSSRNHSATGEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EKEPLDLGAPISSLDGQRVVLEEKDPSRGKASADKQKGVPVKQNTAVNSSSRNHSATGEE
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB5 RTLGKSNSIKIKGENGKNARDPRLSKREESIAKIGKKKYQKINLDEAEEFFELISKAQSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 RTLGKSNSIKIKGENGKNARDPRLSKREESIAKIGKKKYQKINLDEAEEFFELISKAQSN
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KB5 RADDQRGLLRKEDLVLPEFLRLPPGSTELTLPTPAAVAKGFSKRSATGNGRESASQPGEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 RADDQRGLLRKEDLVLPEFLRLPPGSTELTLPTPAAVAKGFSKRSATGNGRESASQPGEQ
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KB5 WEPVQESSDSPSTSPGSASSPPGPPGTTPPGQKSPSGPFCTPQSPVSLAQEGTAQIWKRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 WEPVQESSDSPSTSPGSASSPPGPPGTTPPGQKSPSGPFCTPQSPVSLAQEGTAQIWKRQ
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370
pF1KB5 SQEVEAGGIQTVEDEHVAELTLMGEGDISSPNSTLLPPPSTPQEVPGPSRPGTSRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SQEVEAGGIQTVEDEHVAELTLMGEGDISSPNSTLLPPPSTPQEVPGPSRPGTSRF
1330 1340 1350 1360 1370
>>CCDS3366.1 RGS12 gene_id:6002|Hs108|chr4 (1447 aa)
initn: 9300 init1: 9230 opt: 9230 Z-score: 5672.1 bits: 1062.0 E(32554): 0
Smith-Waterman score: 9230; 99.9% identity (100.0% similar) in 1373 aa overlap (1-1373:1-1373)
10 20 30 40 50 60
pF1KB5 MFRAGEASKRPLPGPSPPRVRSVEVARGRAGYGFTLSGQAPCVLSCVMRGSPADFVGLRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MFRAGEASKRPLPGPSPPRVRSVEVARGRAGYGFTLSGQAPCVLSCVMRGSPADFVGLRA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GDQILAVNEINVKKASHEDVVKLIGKCSGVLHMVIAEGVGRFESCSSDEEGGLYEGKGWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 GDQILAVNEINVKKASHEDVVKLIGKCSGVLHMVIAEGVGRFESCSSDEEGGLYEGKGWL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KPKLDSKALGINRAERVVEEMQSGGIFNMIFENPSLCASNSEPLKLKQRSLSESAATRFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KPKLDSKALGINRAERVVEEMQSGGIFNMIFENPSLCASNSEPLKLKQRSLSESAATRFD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 VGHESINNPNPNMLSKEEISKVIHDDSVFSIGLESHDDFALDASILNVAMIVGYLGSIEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VGHESINNPNPNMLSKEEISKVIHDDSVFSIGLESHDDFALDASILNVAMIVGYLGSIEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 PSTSSNLESDSLQAIRGCMRRLRAEQKIHSLVTMKIMHDCVQLSTDKAGVVAEYPAEKLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 PSTSSNLESDSLQAIRGCMRRLRAEQKIHSLVTMKIMHDCVQLSTDKAGVVAEYPAEKLA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 FSAVCPDDRRFFGLVTMQTNDDGSLAQEEEGALRTSCHVFMVDPDLFNHKIHQGIARRFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 FSAVCPDDRRFFGLVTMQTNDDGSLAQEEEGALRTSCHVFMVDPDLFNHKIHQGIARRFG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 FECTADPDTNGCLEFPASSLPVLQFISVLYRDMGELIEGMRARAFLDGDADAHQNNSTSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 FECTADPDTNGCLEFPASSLPVLQFISVLYRDMGELIEGMRARAFLDGDADAHQNNSTSS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 NSDSGIGNFHQEEKSNRVLVVDLGGSSSRHGPGGSAWDGVGGRGAQPWGAPWTGPFCPDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 NSDSGIGNFHQEEKSNRVLVVDLGGSSSRHGPGGSAWDGVGGRGAQPWGAPWTGPFCPDP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 EGSPPFEAAHQTDRFWDLNKHLGPASPVEVPPASLRSSVPPSKRGTVGAGCGFNQRWLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EGSPPFEAAHQTDRFWDLNKHLGPASPVEVPPASLRSSVPPSKRGTVGAGCGFNQRWLPV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB5 HVLREWQCGHTSDQDSYTDSTDGWSSINCGTLPPPMSKIPADRYRVEGSFAQPPLNAPKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 HVLREWQCGHTSDQDSYTDSTDGWSSINCGTLPPPMSKIPADRYRVEGSFAQPPLNAPKR
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB5 EWSRKAFGMQSIFGPHRNVRKTKEDKKGSKFGRGTGLTQPSQRTSARRSFGRSKRFSITR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EWSRKAFGMQSIFGPHRNVRKTKEDKKGSKFGRGTGLTQPSQRTSARRSFGRSKRFSITR
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB5 SLDDLESATVSDGELTGADLKDCVSNNSLSSNASLPSVQSCRRLRERRVASWAVSFERLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SLDDLESATVSDGELTGADLKDCVSNNSLSSNASLPSVQSCRRLRERRVASWAVSFERLL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB5 QDPVGVRYFSDFLRKEFSEENILFWQACEYFNHVPAHDKKELSYRAREIFSKFLCSKATT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 QDPVGVRYFSDFLRKEFSEENILFWQACEYFNHVPAHDKKELSYRAREIFSKFLCSKATT
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB5 PVNIDSQAQLADDVLRAPHPDMFKEQQLQIFNLMKFDSYTRFLKSPLYQECILAEVEGRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 PVNIDSQAQLADDVLRAPHPDMFKEQQLQIFNLMKFDSYTRFLKSPLYQECILAEVEGRA
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB5 LPDSQQVPSSPASKHSLGSDHSSVSTPKKLSGKSKSGRSLNEELGDEDSEKKRKGAFFSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LPDSQQVPSSPASKHSLGSDHSSVSTPKKLSGKSKSGRSLNEELGDEDSEKKRKGAFFSW
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB5 SRTRSTGRSQKKREHGDHADDALHANGGLCRRESQGSVSSAGSLDLSEACRTLAPEKDKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SRTRSTGRSQKKREHGDHADDALHANGGLCRRESQGSVSSAGSLDLSEACRTLAPEKDKA
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB5 TKHCCIHLPDGTSCVVAVKAGFSIKDILSGLCERHGINGAAADLFLVGGDKPLVLHQDSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 TKHCCIHLPDGTSCVVAVKAGFSIKDILSGLCERHGINGAAADLFLVGGDKPLVLHQDSS
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB5 ILESRDLRLEKRTLFRLDLVPINRSVGLKAKPTKPVTEVLRPVVARYGLDLSGLLVRLSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ILESRDLRLEKRTLFRLDLVPINRSVGLKAKPTKPVTEVLRPVVARYGLDLSGLLVRLSG
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB5 EKEPLDLGAPISSLDGQRVVLEEKDPSRGKASADKQKGVPVKQNTAVNSSSRNHSATGEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EKEPLDLGAPISSLDGQRVVLEEKDPSRGKASADKQKGVPVKQNTAVNSSSRNHSATGEE
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB5 RTLGKSNSIKIKGENGKNARDPRLSKREESIAKIGKKKYQKINLDEAEEFFELISKAQSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 RTLGKSNSIKIKGENGKNARDPRLSKREESIAKIGKKKYQKINLDEAEEFFELISKAQSN
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KB5 RADDQRGLLRKEDLVLPEFLRLPPGSTELTLPTPAAVAKGFSKRSATGNGRESASQPGEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 RADDQRGLLRKEDLVLPEFLRLPPGSTELTLPTPAAVAKGFSKRSATGNGRESASQPGEQ
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KB5 WEPVQESSDSPSTSPGSASSPPGPPGTTPPGQKSPSGPFCTPQSPVSLAQEGTAQIWKRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 WEPVQESSDSPSTSPGSASSPPGPPGTTPPGQKSPSGPFCTPQSPVSLAQEGTAQIWKRQ
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370
pF1KB5 SQEVEAGGIQTVEDEHVAELTLMGEGDISSPNSTLLPPPSTPQEVPGPSRPGTSRF
::::::::::::::::::::::::::::::::::::::::::::::::::::.
CCDS33 SQEVEAGGIQTVEDEHVAELTLMGEGDISSPNSTLLPPPSTPQEVPGPSRPGSGTHGSRD
1330 1340 1350 1360 1370 1380
CCDS33 LPVNRIIDVDLVTGSAPGRDGGIAGAQAGPGRSQASGGPPTSDLPGLGPVPGEPAKPKTS
1390 1400 1410 1420 1430 1440
>>CCDS3368.1 RGS12 gene_id:6002|Hs108|chr4 (799 aa)
initn: 4740 init1: 4670 opt: 4680 Z-score: 2884.5 bits: 545.4 E(32554): 2.4e-154
Smith-Waterman score: 4680; 99.4% identity (99.9% similar) in 711 aa overlap (663-1373:15-725)
640 650 660 670 680 690
pF1KB5 RGTGLTQPSQRTSARRSFGRSKRFSITRSLDDLESATVSDGELTGADLKDCVSNNSLSSN
.: .::::::::::::::::::::::::::
CCDS33 MNLGKELSNETHVSNDQQSATVSDGELTGADLKDCVSNNSLSSN
10 20 30 40
700 710 720 730 740 750
pF1KB5 ASLPSVQSCRRLRERRVASWAVSFERLLQDPVGVRYFSDFLRKEFSEENILFWQACEYFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ASLPSVQSCRRLRERRVASWAVSFERLLQDPVGVRYFSDFLRKEFSEENILFWQACEYFN
50 60 70 80 90 100
760 770 780 790 800 810
pF1KB5 HVPAHDKKELSYRAREIFSKFLCSKATTPVNIDSQAQLADDVLRAPHPDMFKEQQLQIFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 HVPAHDKKELSYRAREIFSKFLCSKATTPVNIDSQAQLADDVLRAPHPDMFKEQQLQIFN
110 120 130 140 150 160
820 830 840 850 860 870
pF1KB5 LMKFDSYTRFLKSPLYQECILAEVEGRALPDSQQVPSSPASKHSLGSDHSSVSTPKKLSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LMKFDSYTRFLKSPLYQECILAEVEGRALPDSQQVPSSPASKHSLGSDHSSVSTPKKLSG
170 180 190 200 210 220
880 890 900 910 920 930
pF1KB5 KSKSGRSLNEELGDEDSEKKRKGAFFSWSRTRSTGRSQKKREHGDHADDALHANGGLCRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KSKSGRSLNEELGDEDSEKKRKGAFFSWSRTRSTGRSQKKREHGDHADDALHANGGLCRR
230 240 250 260 270 280
940 950 960 970 980 990
pF1KB5 ESQGSVSSAGSLDLSEACRTLAPEKDKATKHCCIHLPDGTSCVVAVKAGFSIKDILSGLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ESQGSVSSAGSLDLSEACRTLAPEKDKATKHCCIHLPDGTSCVVAVKAGFSIKDILSGLC
290 300 310 320 330 340
1000 1010 1020 1030 1040 1050
pF1KB5 ERHGINGAAADLFLVGGDKPLVLHQDSSILESRDLRLEKRTLFRLDLVPINRSVGLKAKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ERHGINGAAADLFLVGGDKPLVLHQDSSILESRDLRLEKRTLFRLDLVPINRSVGLKAKP
350 360 370 380 390 400
1060 1070 1080 1090 1100 1110
pF1KB5 TKPVTEVLRPVVARYGLDLSGLLVRLSGEKEPLDLGAPISSLDGQRVVLEEKDPSRGKAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 TKPVTEVLRPVVARYGLDLSGLLVRLSGEKEPLDLGAPISSLDGQRVVLEEKDPSRGKAS
410 420 430 440 450 460
1120 1130 1140 1150 1160 1170
pF1KB5 ADKQKGVPVKQNTAVNSSSRNHSATGEERTLGKSNSIKIKGENGKNARDPRLSKREESIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ADKQKGVPVKQNTAVNSSSRNHSATGEERTLGKSNSIKIKGENGKNARDPRLSKREESIA
470 480 490 500 510 520
1180 1190 1200 1210 1220 1230
pF1KB5 KIGKKKYQKINLDEAEEFFELISKAQSNRADDQRGLLRKEDLVLPEFLRLPPGSTELTLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KIGKKKYQKINLDEAEEFFELISKAQSNRADDQRGLLRKEDLVLPEFLRLPPGSTELTLP
530 540 550 560 570 580
1240 1250 1260 1270 1280 1290
pF1KB5 TPAAVAKGFSKRSATGNGRESASQPGEQWEPVQESSDSPSTSPGSASSPPGPPGTTPPGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 TPAAVAKGFSKRSATGNGRESASQPGEQWEPVQESSDSPSTSPGSASSPPGPPGTTPPGQ
590 600 610 620 630 640
1300 1310 1320 1330 1340 1350
pF1KB5 KSPSGPFCTPQSPVSLAQEGTAQIWKRQSQEVEAGGIQTVEDEHVAELTLMGEGDISSPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KSPSGPFCTPQSPVSLAQEGTAQIWKRQSQEVEAGGIQTVEDEHVAELTLMGEGDISSPN
650 660 670 680 690 700
1360 1370
pF1KB5 STLLPPPSTPQEVPGPSRPGTSRF
::::::::::::::::::::.
CCDS33 STLLPPPSTPQEVPGPSRPGSGTHGSRDLPVNRIIDVDLVTGSAPGRDGGIAGAQAGPGR
710 720 730 740 750 760
>>CCDS43405.1 RGS14 gene_id:10636|Hs108|chr5 (566 aa)
initn: 1285 init1: 635 opt: 704 Z-score: 447.4 bits: 93.9 E(32554): 1.3e-18
Smith-Waterman score: 1255; 41.9% identity (65.1% similar) in 601 aa overlap (670-1247:19-562)
640 650 660 670 680 690
pF1KB5 PSQRTSARRSFGRSKRFSITRSLDDLESATVSDGEL---TGADLKDCVSNNSLSSNASLP
:::::: :: . . ..::: . :::
CCDS43 MPGKPKHLGVPNGRMVLAVSDGELSSTTGPQGQGEGRGSSLSIH-SLP
10 20 30 40
700 710 720 730 740 750
pF1KB5 SVQSCRR-LRERRVASWAVSFERLLQDPVGVRYFSDFLRKEFSEENILFWQACEYFNHVP
: : .:. :::::.:::::::::.:. ::..::.:::: ::. ::.::: :...:
CCDS43 SGPSSPFPTEEQPVASWALSFERLLQDPLGLAYFTEFLKKEFSAENVTFWKACERFQQIP
50 60 70 80 90 100
760 770 780 790 800 810
pF1KB5 AHDKKELSYRAREIFSKFLCSKATTPVNIDSQAQLADDVLRAPHPDMFKEQQLQIFNLMK
: : ..:. .::.:...:: :.: .::::: :: :...:: :.::::. ::::::::::
CCDS43 ASDTQQLAQEARNIYQEFLSSQALSPVNIDRQAWLGEEVLAEPRPDMFRAQQLQIFNLMK
110 120 130 140 150 160
820 830 840 850 860 870
pF1KB5 FDSYTRFLKSPLYQECILAEVEGRALPDSQQVPSSPASKHSLGSDHSSVSTPKKLSGKSK
::::.::.:::::.::.:::.::: : . :.:.. ::: .. . :: :::
CCDS43 FDSYARFVKSPLYRECLLAEAEGRPLRE-------PGSSR-LGSPDATRKKPKLKPGKSL
170 180 190 200 210
880 890 900 910 920 930
pF1KB5 SGRSLN-EELGDEDSEKKRKGAFFSWSRTRSTGRSQKKREHGDHADDALHANGGLCRRES
:. ::::. . : : :.. .:: : :. :: ::::
CCDS43 P---LGVEELGQLPPVEGPGG--------RPL-RKSFRRELGGTANAAL-------RRES
220 230 240 250 260
940 950 960 970 980
pF1KB5 QGSVSSAGSLDL---------SEACR-----TLAPEKDKATKHCCIHLPDGTSCVVAVKA
:::..:..:::: ::. : : . ... :.::..:::::. .. ..
CCDS43 QGSLNSSASLDLGFLAFVSSKSESHRKSLGSTEGESESRPGKYCCVYLPDGTASLALARP
270 280 290 300 310 320
990 1000 1010 1020 1030 1040
pF1KB5 GFSIKDILSGLCERHGINGAAADLFLVGGDKPLVLHQDSSILESRDLRLEKRTLFRLDLV
:..:.:.:.:.::..:.. ..:::... ::: :: ..: ....:::.: :.:.:.
CCDS43 GLTIRDMLAGICEKRGLSLPDIKVYLVGNEQALVLDQDCTVLADQEVRLENRITFELELT
330 340 350 360 370 380
1050 1060 1070 1080 1090 1100
pF1KB5 PINRSVGLKAKPTKPVTEVLRPVVARYGLDLSGLLVRLSGEKEPLDLGAPISSLDGQRVV
..: : ..::::: . :.:.:.. ..::. .... :::.::::: .::. .::.:
CCDS43 ALERVVRISAKPTKRLQEALQPILEKHGLSPLEVVLHRPGEKQPLDLGKLVSSVAAQRLV
390 400 410 420 430 440
1110 1120 1130 1140 1150 1160
pF1KB5 LEEKDPSRGKASADKQKGVPVKQNTAVNSSSRNHSATGEERTLGKSNSIKIKGENGKNAR
: : :: . :..:..: :. : . :. . :
CCDS43 L------------DTLPGVKI-------SKARDKSPC---RSQGCPPRTQDKATHPPPAS
450 460 470
1170 1180 1190 1200 1210 1220
pF1KB5 DPRLSKREESIAKIGKKKYQKINLDEAEEFFELISKAQSNRADDQRGLLRKEDLVLPEFL
: : : . ::.. : : . ::....::. : :::::::::::::::::
CCDS43 PSSLVKVPSSAT--GKRQTCDI-----EGLVELLNRVQSSGAHDQRGLLRKEDLVLPEFL
480 490 500 510 520 530
1230 1240 1250 1260 1270
pF1KB5 RLPPG--STELTLPTPAAVAK--GFSKRSATGNGRESASQPGEQWEPVQESSDSPSTSPG
.:: :.: : : ..:. : : :.:
CCDS43 QLPAQGPSSEETPPQTKSAAQPIGGSLNSTTDSAL
540 550 560
1280 1290 1300 1310 1320 1330
pF1KB5 SASSPPGPPGTTPPGQKSPSGPFCTPQSPVSLAQEGTAQIWKRQSQEVEAGGIQTVEDEH
>>CCDS41572.1 RGS10 gene_id:6001|Hs108|chr10 (167 aa)
initn: 479 init1: 291 opt: 487 Z-score: 321.9 bits: 68.9 E(32554): 1.3e-11
Smith-Waterman score: 487; 51.1% identity (79.1% similar) in 139 aa overlap (707-845:19-155)
680 690 700 710 720 730
pF1KB5 GADLKDCVSNNSLSSNASLPSVQSCRRLRERRVASWAVSFERLLQDPVGVRYFSDFLRKE
. .:.::.:.: ::.:: ::. : .::.::
CCDS41 MEHIHDSDGSSSSSHQSLKSTAKWAASLENLLEDPEGVKRFREFLKKE
10 20 30 40
740 750 760 770 780 790
pF1KB5 FSEENILFWQACEYFNHVPAHDKKELSYRAREIFSKFLCSKATTPVNIDSQAQLADDVLR
:::::.::: ::: :... .:: ... .:.::. :: :::.. ::...:..: . .:.
CCDS41 FSEENVLFWLACEDFKKM--QDKTQMQEKAKEIYMTFLSSKASSQVNVEGQSRLNEKILE
50 60 70 80 90 100
800 810 820 830 840 850
pF1KB5 APHPDMFKEQQLQIFNLMKFDSYTRFLKSPLYQECILAEVEGRALPDSQQVPSSPASKHS
::: ::.. : :::::::.:::.::::: :. . .: : . :::.:
CCDS41 EPHPLMFQKLQDQIFNLMKYDSYSRFLKSDLFLKHKRTEEEEEDLPDAQTAAKRASRIYN
110 120 130 140 150 160
860 870 880 890 900 910
pF1KB5 LGSDHSSVSTPKKLSGKSKSGRSLNEELGDEDSEKKRKGAFFSWSRTRSTGRSQKKREHG
CCDS41 T
>>CCDS31294.1 RGS10 gene_id:6001|Hs108|chr10 (181 aa)
initn: 479 init1: 291 opt: 487 Z-score: 321.4 bits: 69.0 E(32554): 1.4e-11
Smith-Waterman score: 487; 51.1% identity (79.1% similar) in 139 aa overlap (707-845:33-169)
680 690 700 710 720 730
pF1KB5 GADLKDCVSNNSLSSNASLPSVQSCRRLRERRVASWAVSFERLLQDPVGVRYFSDFLRKE
. .:.::.:.: ::.:: ::. : .::.::
CCDS31 NRAVSRLSRKRPPSDIHDSDGSSSSSHQSLKSTAKWAASLENLLEDPEGVKRFREFLKKE
10 20 30 40 50 60
740 750 760 770 780 790
pF1KB5 FSEENILFWQACEYFNHVPAHDKKELSYRAREIFSKFLCSKATTPVNIDSQAQLADDVLR
:::::.::: ::: :... .:: ... .:.::. :: :::.. ::...:..: . .:.
CCDS31 FSEENVLFWLACEDFKKM--QDKTQMQEKAKEIYMTFLSSKASSQVNVEGQSRLNEKILE
70 80 90 100 110 120
800 810 820 830 840 850
pF1KB5 APHPDMFKEQQLQIFNLMKFDSYTRFLKSPLYQECILAEVEGRALPDSQQVPSSPASKHS
::: ::.. : :::::::.:::.::::: :. . .: : . :::.:
CCDS31 EPHPLMFQKLQDQIFNLMKYDSYSRFLKSDLFLKHKRTEEEEEDLPDAQTAAKRASRIYN
130 140 150 160 170 180
860 870 880 890 900 910
pF1KB5 LGSDHSSVSTPKKLSGKSKSGRSLNEELGDEDSEKKRKGAFFSWSRTRSTGRSQKKREHG
CCDS31 T
1376 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 07:19:50 2016 done: Sat Nov 5 07:19:51 2016
Total Scan time: 5.700 Total Display time: 0.250
Function used was FASTA [36.3.4 Apr, 2011]