FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1160, 527 aa 1>>>pF1KE1160 527 - 527 aa - 527 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.1341+/-0.000939; mu= 2.8817+/- 0.057 mean_var=224.0150+/-47.265, 0's: 0 Z-trim(114.1): 112 B-trim: 738 in 1/50 Lambda= 0.085691 statistics sampled from 14575 (14690) to 14575 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.758), E-opt: 0.2 (0.451), width: 16 Scan time: 3.880 The best scores are: opt bits E(32554) CCDS12294.1 NACC1 gene_id:112939|Hs108|chr19 ( 527) 3522 448.0 1.2e-125 CCDS6993.1 NACC2 gene_id:138151|Hs108|chr9 ( 587) 1020 138.8 1.7e-32 >>CCDS12294.1 NACC1 gene_id:112939|Hs108|chr19 (527 aa) initn: 3522 init1: 3522 opt: 3522 Z-score: 2369.2 bits: 448.0 E(32554): 1.2e-125 Smith-Waterman score: 3522; 100.0% identity (100.0% similar) in 527 aa overlap (1-527:1-527) 10 20 30 40 50 60 pF1KE1 MAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 NSRSAVVELPAAVQPQSFQQILSFCYTGRLSMNVGDQFLLMYTAGFLQIQEIMEKGTEFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 NSRSAVVELPAAVQPQSFQQILSFCYTGRLSMNVGDQFLLMYTAGFLQIQEIMEKGTEFF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 LKVSSPSCDSQGLHAEEAPSSEPQSPVAQTSGWPACSTPLPLVSRVKTEQQESDSVQCMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 LKVSSPSCDSQGLHAEEAPSSEPQSPVAQTSGWPACSTPLPLVSRVKTEQQESDSVQCMP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VAKRLWDSGQKEAGGGGNGSRKMAKFSTPDLAANRPHQPPPPQQAPVVAAAQPAVAAGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 VAKRLWDSGQKEAGGGGNGSRKMAKFSTPDLAANRPHQPPPPQQAPVVAAAQPAVAAGAG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 QPAGGVAAAGGVVSGPSTSERTSPGTSSAYTSDSPGSYHNEEDEEEDGGEEGMDEQYRQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 QPAGGVAAAGGVVSGPSTSERTSPGTSSAYTSDSPGSYHNEEDEEEDGGEEGMDEQYRQI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 CNMYTMYSMMNVGQTAEKVEALPEQVAPESRNRIRVRQDLASLPAELINQIGNRCHPKLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 CNMYTMYSMMNVGQTAEKVEALPEQVAPESRNRIRVRQDLASLPAELINQIGNRCHPKLY 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 DEGDPSEKLELVTGTNVYITRAQLMNCHVSAGTRHKVLLRRLLASFFDRNTLANSCGTGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 DEGDPSEKLELVTGTNVYITRAQLMNCHVSAGTRHKVLLRRLLASFFDRNTLANSCGTGI 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 RSSTNDPRRKPLDSRVLHAVKYYCQNFAPNFKESEMNAIAADMCTNARRVVRKSWMPKVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 RSSTNDPRRKPLDSRVLHAVKYYCQNFAPNFKESEMNAIAADMCTNARRVVRKSWMPKVK 430 440 450 460 470 480 490 500 510 520 pF1KE1 VLKAEDDAYTTFISETGKIEPDMMGVEHGFETASHEGEAGPSAEALQ ::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 VLKAEDDAYTTFISETGKIEPDMMGVEHGFETASHEGEAGPSAEALQ 490 500 510 520 >>CCDS6993.1 NACC2 gene_id:138151|Hs108|chr9 (587 aa) initn: 1662 init1: 800 opt: 1020 Z-score: 696.9 bits: 138.8 E(32554): 1.7e-32 Smith-Waterman score: 1666; 56.2% identity (73.9% similar) in 514 aa overlap (1-501:1-478) 10 20 30 40 50 60 pF1KE1 MAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFN :.: :..:::::::..: ::::::: :::::::.::::.::::::::::::: ::::::. CCDS69 MSQMLHIEIPNFGNTVLGCLNEQRLLGLYCDVSIVVKGQAFKAHRAVLAASSLYFRDLFS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 NSRSAVVELPAAVQPQSFQQILSFCYTGRLSMNVGDQFLLMYTAGFLQIQEIMEKGTEFF .. ... :::..: : :::::::::::::.:....:...::::::::::.:.:.::... CCDS69 GNSKSAFELPGSVPPACFQQILSFCYTGRLTMTASEQLVVMYTAGFLQIQHIVERGTDLM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 LKVSSPSCDSQGLHAEEAPSSEPQSPVAQTSGWPACSTPLPLVSRVKTEQQESDSVQCMP .::::: :::: :.: .:::::: : . :: .. : : : :: .: CCDS69 FKVSSPHCDSQTAVIEDA-GSEPQSPCNQLQ--PAAAAAAPYVV--------SPSVP-IP 130 140 150 160 190 200 210 220 230 240 pF1KE1 VAKRLWDSGQKEAGGGGNGSRKMAKFSTPDLAANRPHQPPPPQQAPVVAAAQPAVAAGAG . :. ... .: : :: .:: . : . :..:: :::::.. CCDS69 LLTRVKHEAMELPPAG------------PGLAPKRPLETGP--RDGVAVAAGAAVAAGTA 170 180 190 200 210 250 260 270 280 pF1KE1 Q---PA---GGVAAAGGVVSG----P-STSERTSPGTSSAYTSDSPGSYHNEEDEEEDGG : :: . . .. : : .::::::.:: :.::: :::::::::.: . CCDS69 PLKLPRVSYYGVPSLATLIPGIQQMPYPQGERTSPGASSLPTTDSPTSYHNEEDEEDDEA 220 230 240 250 260 270 290 300 310 320 330 340 pF1KE1 EEGM-DEQYRQICNMYTMYSMMNVGQTAEKVEALPEQVAPESRNRIRVRQDLASLPAELI . : .::: : :: : :. : :. :: : :::. . .:.::..::: :: CCDS69 YDTMVEEQYGQ---MYIKAS----GSYA--VQEKPEPVPLESRSCVLIRRDLVALPASLI 280 290 300 310 320 350 360 370 380 390 400 pF1KE1 NQIGNRCHPKLYDEGDPSEKLELVTGTNVYITRAQLMNCHVSAGTRHKVLLRRLLASFFD .::: :::::::.::::.::::::.:..:::::.::::::. ::..::::::::::.::: CCDS69 SQIGYRCHPKLYSEGDPGEKLELVAGSGVYITRGQLMNCHLCAGVKHKVLLRRLLATFFD 330 340 350 360 370 380 410 420 430 440 450 460 pF1KE1 RNTLANSCGTGIRSSTNDPRRKPLDSRVLHAVKYYCQNFAPNFKESEMNAIAADMCTNAR ::::::::::::::::.:: :::::::::.::: :::::::.:::::::.:::::::::: CCDS69 RNTLANSCGTGIRSSTSDPSRKPLDSRVLNAVKLYCQNFAPSFKESEMNVIAADMCTNAR 390 400 410 420 430 440 470 480 490 500 510 520 pF1KE1 RVVRKSWMPKVKVLKAED-DAYTTFISETGKIEPDMMGVEHGFETASHEGEAGPSAEALQ :: :: :.::.: . : . : : .. .. : CCDS69 RV-RKRWLPKIKSMLPEGVEMYRTVMGSAAASVPLDPEFPPAAAQVFEQRIYAERRGDAA 450 460 470 480 490 500 CCDS69 TIVALRTDAVNVDLSAAANPAFDAGEEVDGAGSVIQEVAAPEPLPADGQSPPQPFEQGGG 510 520 530 540 550 560 527 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 02:40:49 2016 done: Sat Nov 5 02:40:50 2016 Total Scan time: 3.880 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]