(Circular) (Six-base) MAPSORT of: pFN21AB3463.seq Check: 6488 from: 1 to: 9508 pFN21AB3463 9508 bp With 182 enzymes: SgfI * October 20, 2009 10:36 .. AatII G_ACGT'C Cuts at: 278 331 414 600 1536 7318 278 Size: 53 83 186 936 5782 2468 Fragments arranged by size: 5782 2468 936 186 83 53 AccI GT'mk_AC Cuts at: 1937 6851 1937 Size: 4914 4594 Acc65I G'GTAC_C Cuts at: 5420 6829 5420 Size: 1409 8099 AclI AA'CG_TT Cuts at: 1563 7635 8008 1563 Size: 6072 373 3063 Fragments arranged by size: 6072 3063 373 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 1632 2325 4224 4785 5534 5670 5928 6228 6414 Size: 693 1899 561 749 136 258 300 186 Cuts at: 6414 7571 8955 9223 1632 Size: 1157 1384 268 1917 Fragments arranged by size: 1917 1899 1384 1157 749 693 561 300 268 258 186 136 AflII C'TTAA_G Cuts at: 820 1017 3412 820 Size: 197 2395 6916 Fragments arranged by size: 6916 2395 197 AflIII A'CryG_T Cuts at: 1203 2666 6327 8407 9384 1203 Size: 1463 3661 2080 977 1327 Fragments arranged by size: 3661 2080 1463 1327 977 AgeI A'CCGG_T Cuts at: 4364 8339 4364 Size: 3975 5533 AhdI GACnn_n'nnGTC Cuts at: 5785 5854 8237 5785 Size: 69 2383 7056 Fragments arranged by size: 7056 2383 69 AleI CACnn'nnGTG Cuts at: 1166 1166 Size: 9508 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1184 5303 1184 Size: 4119 5389 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 4832 4864 6091 6123 4832 Size: 32 1227 32 8217 Fragments arranged by size: 8217 1227 32 32 AlwNI CAG_nnn'CTG Cuts at: 5896 5906 7251 8823 5896 Size: 10 1345 1572 6581 Fragments arranged by size: 6581 1572 1345 10 ApaLI G'TGCA_C Cuts at: 7565 8721 7565 Size: 1156 8352 ApoI r'AATT_y Cuts at: 1493 2400 3013 3138 3506 3792 4352 4467 4678 Size: 907 613 125 368 286 560 115 211 Cuts at: 4678 4755 5227 5434 6817 7043 7195 9304 1493 Size: 77 472 207 1383 226 152 2109 1697 Fragments arranged by size: 2109 1697 1383 907 613 560 472 368 286 226 211 207 152 125 115 77 AseI AT'TA_AT Cuts at: 160 1032 2147 8062 160 Size: 872 1115 5915 1606 Fragments arranged by size: 5915 1606 1115 872 AsiSI GCG_AT'CGC Cuts at: 2001 2001 Size: 9508 AvaI C'yCGr_G Cuts at: 1870 1943 2057 2069 6833 1870 Size: 73 114 12 4764 4545 Fragments arranged by size: 4764 4545 114 73 12 BamHI G'GATC_C Cuts at: 3310 6838 7205 3310 Size: 3528 367 5613 Fragments arranged by size: 5613 3528 367 BanI G'GyrC_C Cuts at: 618 943 1160 1787 5420 5554 6829 8284 618 Size: 325 217 627 3633 134 1275 1455 1842 Fragments arranged by size: 3633 1842 1455 1275 627 325 217 134 BanII G_rGCy'C Cuts at: 1391 6234 6827 1391 Size: 4843 593 4072 Fragments arranged by size: 4843 4072 593 BbsI GAAGACnn'nnnn_ Cuts at: 928 1899 2556 2663 3836 4438 5685 928 Size: 971 657 107 1173 602 1247 4751 Fragments arranged by size: 4751 1247 1173 971 657 602 107 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1903 1937 7699 7733 1903 Size: 34 5762 34 3678 Fragments arranged by size: 5762 3678 34 34 BciVI GTATCCnnnnn_n' Cuts at: 7400 8610 7400 Size: 1210 8298 BclI T'GATC_A Cuts at: 1548 3252 3730 4252 1548 Size: 1704 478 522 6804 Fragments arranged by size: 6804 1704 522 478 BfrBI ATG'CAT Cuts at: 2524 3070 3283 6631 2524 Size: 546 213 3348 5401 Fragments arranged by size: 5401 3348 546 213 BglI GCCn_nnn'nGGC Cuts at: 136 243 365 436 1067 1672 5324 6718 8119 Size: 107 122 71 631 605 3652 1394 1401 Cuts at: 8119 136 Size: 1525 Fragments arranged by size: 3652 1525 1401 1394 631 605 122 107 71 BglII A'GATC_T Cuts at: 2752 4948 9503 2752 Size: 2196 4555 2757 Fragments arranged by size: 4555 2757 2196 BlpI GC'TnA_GC Cuts at: 6925 6925 Size: 9508 Bme1580I G_kGCm'C Cuts at: 1790 5275 7569 8725 1790 Size: 3485 2294 1156 2573 Fragments arranged by size: 3485 2573 2294 1156 BmgBI CAC'GTC Cuts at: 1318 2669 1318 Size: 1351 8157 BmrI ACTGGGnnnn_n' Cuts at: 442 858 911 994 1393 1417 5925 6419 7239 Size: 416 53 83 399 24 4508 494 820 Cuts at: 7239 8197 442 Size: 958 1753 Fragments arranged by size: 4508 1753 958 820 494 416 399 83 53 24 BmtI G_CTAG'C Cuts at: 1056 1056 Size: 9508 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 2968 2968 Size: 9508 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 1239 2840 2937 5460 5779 6295 6513 6576 8168 Size: 1601 97 2523 319 516 218 63 1592 Cuts at: 8168 1239 Size: 2579 Fragments arranged by size: 2579 2523 1601 1592 516 319 218 97 63 Bpu10I CC'TnA_GC Cuts at: 3267 4097 3267 Size: 830 8678 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 4524 5715 6036 7633 8498 8796 4524 Size: 1191 321 1597 865 298 5236 Fragments arranged by size: 5236 1597 1191 865 321 298 BsaI GGTCTCn'nnnn_ Cuts at: 882 1499 8171 882 Size: 617 6672 2219 Fragments arranged by size: 6672 2219 617 BsaAI yAC'GTr Cuts at: 493 1204 6330 7299 493 Size: 711 5126 969 2702 Fragments arranged by size: 5126 2702 969 711 BsaBI GATnn'nnATC Cuts at: 2625 9502 2625 Size: 6877 2631 BsaHI Gr'CG_yC Cuts at: 275 328 411 597 1533 5696 7315 7697 8332 Size: 53 83 186 936 4163 1619 382 635 Cuts at: 8332 275 Size: 1451 Fragments arranged by size: 4163 1619 1451 936 635 382 186 83 53 BsaWI w'CCGG_w Cuts at: 3222 3549 4364 7941 8339 8613 8760 9171 3222 Size: 327 815 3577 398 274 147 411 3559 Fragments arranged by size: 3577 3559 815 411 398 327 274 147 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 1178 1208 1373 1403 3177 3207 1178 Size: 30 165 30 1774 30 7479 Fragments arranged by size: 7479 1774 165 30 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 1186 5390 5718 6298 6516 1186 Size: 4204 328 580 218 4178 Fragments arranged by size: 4204 4178 580 328 218 BseYI C'CCAG_C Cuts at: 3120 4602 5182 6156 6379 8711 9207 3120 Size: 1482 580 974 223 2332 496 3421 Fragments arranged by size: 3421 2332 1482 974 580 496 223 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 1163 1736 5592 6632 1163 Size: 573 3856 1040 4039 Fragments arranged by size: 4039 3856 1040 573 BsiEI CG_ry'CG Cuts at: 1540 1815 2001 6958 7719 8747 1540 Size: 275 186 4957 761 1028 2301 Fragments arranged by size: 4957 2301 1028 761 275 186 BsiHKAI G_wGCw'C Cuts at: 2164 5260 5940 6377 7569 7654 8725 2164 Size: 3096 680 437 1192 85 1071 2947 Fragments arranged by size: 3096 2947 1192 1071 680 437 85 BsmI GAATG_Cn' Cuts at: 2368 7019 7112 2368 Size: 4651 93 4764 Fragments arranged by size: 4764 4651 93 BsmBI CGTCTCn'nnnn_ Cuts at: 3278 3278 Size: 9508 Bsp1286I G_dGCh'C Cuts at: 1391 1790 2164 5260 5275 5940 6234 6377 6827 Size: 399 374 3096 15 665 294 143 450 Cuts at: 6827 7569 7654 8725 1391 Size: 742 85 1071 2174 Fragments arranged by size: 3096 2174 1071 742 665 450 399 374 294 143 85 15 BspEI T'CCGG_A Cuts at: 9171 9171 Size: 9508 BspHI T'CATG_A Cuts at: 4348 7397 9127 4348 Size: 3049 1730 4729 Fragments arranged by size: 4729 3049 1730 BspMI ACCTGCnnnn'nnnn_ Cuts at: 844 2791 6863 844 Size: 1947 4072 3489 Fragments arranged by size: 4072 3489 1947 BsrBI CCG'CTC Cuts at: 1394 1823 2062 7395 1394 Size: 429 239 5333 3507 Fragments arranged by size: 5333 3507 429 239 BsrDI GCAATG_nn' Cuts at: 65 1248 2586 2738 6043 6201 8003 8177 65 Size: 1183 1338 152 3305 158 1802 174 1396 Fragments arranged by size: 3305 1802 1396 1338 1183 174 158 152 BsrFI r'CCGG_y Cuts at: 1700 1810 4364 8152 8339 1700 Size: 110 2554 3788 187 2869 Fragments arranged by size: 3788 2869 2554 187 110 BsrGI T'GTAC_A Cuts at: 96 96 Size: 9508 BssHII G'CGCG_C Cuts at: 1925 1925 Size: 9508 BssSI C'ACGA_G Cuts at: 6677 7568 8580 6677 Size: 891 1012 7605 Fragments arranged by size: 7605 1012 891 BstAPI GCAn_nnn'nTGC Cuts at: 794 3067 6727 794 Size: 2273 3660 3575 Fragments arranged by size: 3660 3575 2273 BstBI TT'CG_AA Cuts at: 5158 8312 5158 Size: 3154 6354 BstEII G'GTnAC_C Cuts at: 1184 3476 1184 Size: 2292 7216 BstXI CCAn_nnnn'nTGG Cuts at: 4222 4594 6156 4222 Size: 372 1562 7574 Fragments arranged by size: 7574 1562 372 BstYI r'GATC_y Cuts at: 1972 2243 2734 2752 3310 4948 6838 7205 7590 Size: 271 491 18 558 1638 1890 367 385 Cuts at: 7590 7607 9059 9145 9157 9503 1972 Size: 17 1452 86 12 346 1977 Fragments arranged by size: 1977 1890 1638 1452 558 491 385 367 346 271 86 18 17 12 Bsu36I CC'TnA_GG Cuts at: 4410 4410 Size: 9508 BtgI C'CryG_G Cuts at: 513 1065 2016 2265 513 Size: 552 951 249 7756 Fragments arranged by size: 7756 951 552 249 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 487 1170 1226 487 Size: 683 56 8769 Fragments arranged by size: 8769 683 56 BtsI GCAGTG_nn' Cuts at: 6278 6615 7024 7818 7838 6278 Size: 337 409 794 20 7948 Fragments arranged by size: 7948 794 409 337 20 ClaI AT'CG_AT Cuts at: 1554 4659 1554 Size: 3105 6403 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 529 564 529 Size: 35 9473 DraI TTT'AAA Cuts at: 2970 3144 6812 2970 Size: 174 3668 5666 Fragments arranged by size: 5666 3668 174 DraIII CAC_nnn'GTG Cuts at: 3250 3250 Size: 9508 DrdI GACnn_nn'nnGTC Cuts at: 809 1316 2560 8515 809 Size: 507 1244 5955 1802 Fragments arranged by size: 5955 1802 1244 507 EaeI y'GGCC_r Cuts at: 8 62 1487 1537 1812 1830 4596 5497 6955 Size: 54 1425 50 275 18 2766 901 1458 Cuts at: 6955 7844 9473 8 Size: 889 1629 43 Fragments arranged by size: 2766 1629 1458 1425 901 889 275 54 50 43 18 EagI C'GGCC_G Cuts at: 1537 1812 6955 1537 Size: 275 5143 4090 Fragments arranged by size: 5143 4090 275 EarI CTCTTCn'nnn_ Cuts at: 1353 2505 2700 2712 3174 4700 5045 6036 7438 Size: 1152 195 12 462 1526 345 991 1402 Cuts at: 7438 1353 Size: 3423 Fragments arranged by size: 3423 1526 1402 1152 991 462 345 195 12 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 387 1451 1589 5135 8095 8469 8615 387 Size: 1064 138 3546 2960 374 146 1280 Fragments arranged by size: 3546 2960 1280 1064 374 146 138 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 1239 1632 2325 2840 2937 4224 4785 5460 5534 Size: 393 693 515 97 1287 561 675 74 Cuts at: 5534 5670 5779 5928 6228 6295 6414 6513 6576 Size: 136 109 149 300 67 119 99 63 Cuts at: 6576 7571 8168 8955 9223 1239 Size: 995 597 787 268 1524 Fragments arranged by size: 1524 1287 995 787 693 675 597 561 515 393 300 268 149 136 119 109 99 97 74 67 63 EcoNI CCTnn'n_nnAGG Cuts at: 5745 6747 5745 Size: 1002 8506 EcoO109I rG'GnC_Cy Cuts at: 2681 5893 6569 2681 Size: 3212 676 5620 Fragments arranged by size: 5620 3212 676 EcoRI G'AATT_C Cuts at: 4467 6817 7195 4467 Size: 2350 378 6780 Fragments arranged by size: 6780 2350 378 EcoRV GAT'ATC Cuts at: 2623 4246 2623 Size: 1623 7885 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 3875 6117 3875 Size: 2242 7266 FspI TGC'GCA Cuts at: 8014 8014 Size: 9508 HaeII r_GCGC'y Cuts at: 1678 2031 2458 8655 1678 Size: 353 427 6197 2531 Fragments arranged by size: 6197 2531 427 353 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 1373 1405 1540 1572 3526 3558 4047 4079 4433 Size: 32 135 32 1954 32 489 32 354 Cuts at: 4433 4465 5435 5467 5771 5803 5840 5872 5941 Size: 32 970 32 304 32 37 32 69 Cuts at: 5941 5973 6691 6723 8149 8181 8223 8255 1373 Size: 32 718 32 1426 32 42 32 2626 Fragments arranged by size: 2626 1954 1426 970 718 489 354 304 135 69 42 37 32 32 32 32 32 32 32 32 32 32 32 32 HincII GTy'rAC Cuts at: 669 1657 1938 2485 5848 5966 6852 7098 669 Size: 988 281 547 3363 118 886 246 3079 Fragments arranged by size: 3363 3079 988 886 547 281 246 118 HindIII A'AGCT_T Cuts at: 748 748 Size: 9508 HpaI GTT'AAC Cuts at: 2485 7098 2485 Size: 4613 4895 KpnI G_GTAC'C Cuts at: 5424 6833 5424 Size: 1409 8099 MfeI C'AATT_G Cuts at: 2813 5836 7107 2813 Size: 3023 1271 5214 Fragments arranged by size: 5214 3023 1271 MluI A'CGCG_T Cuts at: 9384 9384 Size: 9508 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 1305 3338 4203 4398 6077 6281 8622 8806 1305 Size: 2033 865 195 1679 204 2341 184 2007 Fragments arranged by size: 2341 2033 2007 1679 865 204 195 184 MscI TGG'CCA Cuts at: 10 64 1489 1832 4598 5499 10 Size: 54 1425 343 2766 901 4019 Fragments arranged by size: 4019 2766 1425 901 343 54 MslI CAynn'nnrTG Cuts at: 518 1166 2858 2997 3462 3842 4217 4592 5401 Size: 648 1692 139 465 380 375 375 809 Cuts at: 5401 6192 7466 7825 7984 518 Size: 791 1274 359 159 2042 Fragments arranged by size: 2042 1692 1274 809 791 648 465 380 375 375 359 159 139 MspA1I CmG'CkG Cuts at: 1606 2507 4606 5495 5561 6077 6383 6924 7601 Size: 901 2099 889 66 516 306 541 677 Cuts at: 7601 8749 8994 1606 Size: 1148 245 2120 Fragments arranged by size: 2120 2099 1148 901 889 677 541 516 306 245 66 NcoI C'CATG_G Cuts at: 513 1065 2265 513 Size: 552 1200 7756 Fragments arranged by size: 7756 1200 552 NdeI CA'TA_TG Cuts at: 387 5416 387 Size: 5029 4479 NheI G'CTAG_C Cuts at: 1052 1052 Size: 9508 NotI GC'GGCC_GC Cuts at: 6955 6955 Size: 9508 NsiI A_TGCA'T Cuts at: 2526 3072 3285 6633 2526 Size: 546 213 3348 5401 Fragments arranged by size: 5401 3348 546 213 NspI r_CATG'y Cuts at: 1132 1229 3070 3947 5239 6866 8411 1132 Size: 97 1841 877 1292 1627 1545 2229 Fragments arranged by size: 2229 1841 1627 1545 1292 877 97 PasI CC'CwG_GG Cuts at: 1348 5975 1348 Size: 4627 4881 PciI A'CATG_T Cuts at: 8407 8407 Size: 9508 PflMI CCAn_nnn'nTGG Cuts at: 1108 2223 6344 1108 Size: 1115 4121 4272 Fragments arranged by size: 4272 4121 1115 PfoI T'CCnGG_A Cuts at: 6529 6529 Size: 9508 PmeI GTTT'AAAC Cuts at: 6812 6812 Size: 9508 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 2742 2774 5366 5398 5824 5856 7577 7609 9090 Size: 32 2592 32 426 32 1721 32 1481 Cuts at: 9090 9122 2742 Size: 32 3128 Fragments arranged by size: 3128 2592 1721 1481 426 32 32 32 32 32 PpuMI rG'GwC_Cy Cuts at: 2681 6569 2681 Size: 3888 5620 PshAI GACnn'nnGTC Cuts at: 1613 5203 6084 1613 Size: 3590 881 5037 Fragments arranged by size: 5037 3590 881 PsiI TTA'TAA Cuts at: 4262 6432 7078 4262 Size: 2170 646 6692 Fragments arranged by size: 6692 2170 646 PstI C_TGCA'G Cuts at: 830 2788 4206 4578 5863 6860 830 Size: 1958 1418 372 1285 997 3478 Fragments arranged by size: 3478 1958 1418 1285 997 372 PvuI CG_AT'CG Cuts at: 2001 2001 Size: 9508 PvuII CAG'CTG Cuts at: 2507 4606 5495 5561 6077 6383 2507 Size: 2099 889 66 516 306 5632 Fragments arranged by size: 5632 2099 889 516 306 66 SalI G'TCGA_C Cuts at: 1936 6850 1936 Size: 4914 4594 SbfI CC_TGCA'GG Cuts at: 6860 6860 Size: 9508 ScaI AGT'ACT Cuts at: 7756 9468 7756 Size: 1712 7796 SexAI A'CCwGG_T Cuts at: 3691 3691 Size: 9508 SfcI C'TryA_G Cuts at: 826 1045 2784 4138 4202 4574 4887 5859 5867 Size: 219 1739 1354 64 372 313 972 8 Cuts at: 5867 6856 7991 8672 8863 826 Size: 989 1135 681 191 1471 Fragments arranged by size: 1739 1471 1354 1135 989 972 681 372 313 219 191 64 8 SgfI GCG_AT'CGC Cuts at: 2001 2001 Size: 9508 SgrAI Cr'CCGG_yG Cuts at: 1700 1700 Size: 9508 SmaI CCC'GGG Cuts at: 1872 6835 1872 Size: 4963 4545 SmlI C'TyrA_G Cuts at: 820 1017 1943 3412 4539 5730 6051 7612 8513 Size: 197 926 1469 1127 1191 321 1561 901 Cuts at: 8513 8775 820 Size: 262 1553 Fragments arranged by size: 1561 1553 1469 1191 1127 926 901 321 262 197 SnaBI TAC'GTA Cuts at: 493 7299 493 Size: 6806 2702 SpeI A'CTAG_T Cuts at: 152 4546 152 Size: 4394 5114 SphI G_CATG'C Cuts at: 1132 6866 1132 Size: 5734 3774 SspI AAT'ATT Cuts at: 5 52 2115 3562 3769 4639 4999 7432 5 Size: 47 2063 1447 207 870 360 2433 2081 Fragments arranged by size: 2433 2081 2063 1447 870 360 207 47 StuI AGG'CCT Cuts at: 1517 4095 1517 Size: 2578 6930 StyI C'CwwG_G Cuts at: 513 1065 2265 5136 6408 6947 513 Size: 552 1200 2871 1272 539 3074 Fragments arranged by size: 3074 2871 1272 1200 552 539 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 325 1580 4616 5967 6502 7535 7552 7705 7890 Size: 1255 3036 1351 535 1033 17 153 185 Cuts at: 7890 8335 325 Size: 445 1498 Fragments arranged by size: 3036 1498 1351 1255 1033 535 445 185 153 17 TatI w'GTAC_w Cuts at: 96 370 450 483 534 1977 3063 4653 6449 Size: 274 80 33 51 1443 1086 1590 1796 Cuts at: 6449 6471 7754 9466 96 Size: 22 1283 1712 138 Fragments arranged by size: 1796 1712 1590 1443 1283 1086 274 138 80 51 33 22 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 3234 3266 5746 5778 5864 5896 9468 9500 3234 Size: 32 2480 32 86 32 3572 32 3242 Fragments arranged by size: 3572 3242 2480 86 32 32 32 32 Tth111I GACn'n_nGTC Cuts at: 1316 2860 1316 Size: 1544 7964 XbaI T'CTAG_A Cuts at: 3499 4973 6257 6644 6844 3499 Size: 1474 1284 387 200 6163 Fragments arranged by size: 6163 1474 1284 387 200 XcmI CCAnnnn_n'nnnnTGG Cuts at: 4219 5920 4219 Size: 1701 7807 XhoI C'TCGA_G Cuts at: 1943 1943 Size: 9508 XmaI C'CCGG_G Cuts at: 1870 6833 1870 Size: 4963 4545 XmnI GAAnn'nnTTC Cuts at: 3330 5131 5164 7637 3330 Size: 1801 33 2473 5201 Fragments arranged by size: 5201 2473 1801 33 ZraI GAC'GTC Cuts at: 276 329 412 598 1534 7316 276 Size: 53 83 186 936 5782 2468 Fragments arranged by size: 5782 2468 936 186 83 53 Enzymes that do cut: AatII AccI Acc65I AclI AcuI AflII AflIII AgeI AhdI AleI AlfI AloI AlwNI ApaLI ApoI AseI AsiSI AvaI BamHI BanI BanII BbsI BcgI BciVI BclI BfrBI BglI BglII BlpI Bme1580I BmgBI BmrI BmtI BplI BpmI Bpu10I BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI BsmBI Bsp1286I BspEI BspHI BspMI BsrBI BsrDI BsrFI BsrGI BssHII BssSI BstAPI BstBI BstEII BstXI BstYI Bsu36I BtgI BtgZI BtsI ClaI CspCI DraI DraIII DrdI EaeI EagI EarI EciI Eco57MI EcoNI EcoO109I EcoRI EcoRV FalI FspI HaeII Hin4I HincII HindIII HpaI KpnI MfeI MluI MmeI MscI MslI MspA1I NcoI NdeI NheI NotI NsiI NspI PasI PciI PflMI PfoI PmeI PpiI PpuMI PshAI PsiI PstI PvuI PvuII SalI SbfI ScaI SexAI SfcI SgfI SgrAI SmaI SmlI SnaBI SpeI SphI SspI StuI StyI TaqII TatI TstI Tth111I XbaI XcmI XhoI XmaI XmnI ZraI Enzymes that do not cut: AarI AfeI ApaI AscI AvrII BaeI BbeI BbvCI BsiWI BstZ17I EcoICRI FseI FspAI KasI NaeI NarI NgoMIV NruI PacI PmlI PspOMI PspXI PsrI RsrII SacI SacII SanDI SapI SfiI SfoI SrfI SwaI