Result of FASTA (omim) for
pFN21AB4392
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4392, 356 aa
1>>>pF1KB4392 356 - 356 aa - 356 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.0877+/-0.000304; mu= 9.7518+/- 0.019
mean_var=146.9362+/-29.583, 0's: 0 Z-trim(122.0): 15 B-trim: 533 in 2/52
Lambda= 0.105806
statistics sampled from 39484 (39503) to 39484 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.792), E-opt: 0.2 (0.463), width: 16
Scan time: 9.800
The best scores are: opt bits E(85289)
XP_011513211 (OMIM: 142610) PREDICTED: G patch dom ( 356) 2457 386.1 6.4e-107
XP_006715267 (OMIM: 142610) PREDICTED: G patch dom ( 356) 2457 386.1 6.4e-107
XP_011513212 (OMIM: 142610) PREDICTED: G patch dom ( 356) 2457 386.1 6.4e-107
NP_001186169 (OMIM: 142610) G patch domain and ank ( 356) 2457 386.1 6.4e-107
XP_005249460 (OMIM: 142610) PREDICTED: G patch dom ( 356) 2457 386.1 6.4e-107
NP_001186167 (OMIM: 142610) G patch domain and ank ( 356) 2457 386.1 6.4e-107
NP_149417 (OMIM: 142610) G patch domain and ankyri ( 356) 2457 386.1 6.4e-107
NP_001186166 (OMIM: 142610) G patch domain and ank ( 356) 2457 386.1 6.4e-107
NP_001186168 (OMIM: 142610) G patch domain and ank ( 356) 2457 386.1 6.4e-107
>>XP_011513211 (OMIM: 142610) PREDICTED: G patch domain (356 aa)
initn: 2457 init1: 2457 opt: 2457 Z-score: 2040.5 bits: 386.1 E(85289): 6.4e-107
Smith-Waterman score: 2457; 100.0% identity (100.0% similar) in 356 aa overlap (1-356:1-356)
10 20 30 40 50 60
pF1KB4 MSRPLLITFTPATDPSDLWKDGQQQPQPEKPESTLDGAAARAFYEALIGDESSAPDSQRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSRPLLITFTPATDPSDLWKDGQQQPQPEKPESTLDGAAARAFYEALIGDESSAPDSQRS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 QTEPARERKRKKRRIMKAPAAEAVAEGASGRHGQGRSLEAEDKMTHRILRAAQEGDLPEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QTEPARERKRKKRRIMKAPAAEAVAEGASGRHGQGRSLEAEDKMTHRILRAAQEGDLPEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 RRLLEPHEAGGAGGNINARDAFWWTPLMCAARAGQGAAVSYLLGRGAAWVGVCELSGRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RRLLEPHEAGGAGGNINARDAFWWTPLMCAARAGQGAAVSYLLGRGAAWVGVCELSGRDA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 AQLAEEAGFPEVARMVRESHGETRSPENRSPTPSLQYCENCDTHFQDSNHRTSTAHLLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AQLAEEAGFPEVARMVRESHGETRSPENRSPTPSLQYCENCDTHFQDSNHRTSTAHLLSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 SQGPQPPNLPLGVPISSPGFKLLLRGGWEPGMGLGPRGEGRANPIPTVLKRDQEGLGYRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SQGPQPPNLPLGVPISSPGFKLLLRGGWEPGMGLGPRGEGRANPIPTVLKRDQEGLGYRS
250 260 270 280 290 300
310 320 330 340 350
pF1KB4 APQPRVTHFPAWDTRAVAGRERPPRVATLSWREERRREEKDRAWERDLRTYMNLEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APQPRVTHFPAWDTRAVAGRERPPRVATLSWREERRREEKDRAWERDLRTYMNLEF
310 320 330 340 350
>>XP_006715267 (OMIM: 142610) PREDICTED: G patch domain (356 aa)
initn: 2457 init1: 2457 opt: 2457 Z-score: 2040.5 bits: 386.1 E(85289): 6.4e-107
Smith-Waterman score: 2457; 100.0% identity (100.0% similar) in 356 aa overlap (1-356:1-356)
10 20 30 40 50 60
pF1KB4 MSRPLLITFTPATDPSDLWKDGQQQPQPEKPESTLDGAAARAFYEALIGDESSAPDSQRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MSRPLLITFTPATDPSDLWKDGQQQPQPEKPESTLDGAAARAFYEALIGDESSAPDSQRS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 QTEPARERKRKKRRIMKAPAAEAVAEGASGRHGQGRSLEAEDKMTHRILRAAQEGDLPEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QTEPARERKRKKRRIMKAPAAEAVAEGASGRHGQGRSLEAEDKMTHRILRAAQEGDLPEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 RRLLEPHEAGGAGGNINARDAFWWTPLMCAARAGQGAAVSYLLGRGAAWVGVCELSGRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RRLLEPHEAGGAGGNINARDAFWWTPLMCAARAGQGAAVSYLLGRGAAWVGVCELSGRDA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 AQLAEEAGFPEVARMVRESHGETRSPENRSPTPSLQYCENCDTHFQDSNHRTSTAHLLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AQLAEEAGFPEVARMVRESHGETRSPENRSPTPSLQYCENCDTHFQDSNHRTSTAHLLSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 SQGPQPPNLPLGVPISSPGFKLLLRGGWEPGMGLGPRGEGRANPIPTVLKRDQEGLGYRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SQGPQPPNLPLGVPISSPGFKLLLRGGWEPGMGLGPRGEGRANPIPTVLKRDQEGLGYRS
250 260 270 280 290 300
310 320 330 340 350
pF1KB4 APQPRVTHFPAWDTRAVAGRERPPRVATLSWREERRREEKDRAWERDLRTYMNLEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 APQPRVTHFPAWDTRAVAGRERPPRVATLSWREERRREEKDRAWERDLRTYMNLEF
310 320 330 340 350
>>XP_011513212 (OMIM: 142610) PREDICTED: G patch domain (356 aa)
initn: 2457 init1: 2457 opt: 2457 Z-score: 2040.5 bits: 386.1 E(85289): 6.4e-107
Smith-Waterman score: 2457; 100.0% identity (100.0% similar) in 356 aa overlap (1-356:1-356)
10 20 30 40 50 60
pF1KB4 MSRPLLITFTPATDPSDLWKDGQQQPQPEKPESTLDGAAARAFYEALIGDESSAPDSQRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSRPLLITFTPATDPSDLWKDGQQQPQPEKPESTLDGAAARAFYEALIGDESSAPDSQRS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 QTEPARERKRKKRRIMKAPAAEAVAEGASGRHGQGRSLEAEDKMTHRILRAAQEGDLPEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QTEPARERKRKKRRIMKAPAAEAVAEGASGRHGQGRSLEAEDKMTHRILRAAQEGDLPEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 RRLLEPHEAGGAGGNINARDAFWWTPLMCAARAGQGAAVSYLLGRGAAWVGVCELSGRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RRLLEPHEAGGAGGNINARDAFWWTPLMCAARAGQGAAVSYLLGRGAAWVGVCELSGRDA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 AQLAEEAGFPEVARMVRESHGETRSPENRSPTPSLQYCENCDTHFQDSNHRTSTAHLLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AQLAEEAGFPEVARMVRESHGETRSPENRSPTPSLQYCENCDTHFQDSNHRTSTAHLLSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 SQGPQPPNLPLGVPISSPGFKLLLRGGWEPGMGLGPRGEGRANPIPTVLKRDQEGLGYRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SQGPQPPNLPLGVPISSPGFKLLLRGGWEPGMGLGPRGEGRANPIPTVLKRDQEGLGYRS
250 260 270 280 290 300
310 320 330 340 350
pF1KB4 APQPRVTHFPAWDTRAVAGRERPPRVATLSWREERRREEKDRAWERDLRTYMNLEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APQPRVTHFPAWDTRAVAGRERPPRVATLSWREERRREEKDRAWERDLRTYMNLEF
310 320 330 340 350
>>NP_001186169 (OMIM: 142610) G patch domain and ankyrin (356 aa)
initn: 2457 init1: 2457 opt: 2457 Z-score: 2040.5 bits: 386.1 E(85289): 6.4e-107
Smith-Waterman score: 2457; 100.0% identity (100.0% similar) in 356 aa overlap (1-356:1-356)
10 20 30 40 50 60
pF1KB4 MSRPLLITFTPATDPSDLWKDGQQQPQPEKPESTLDGAAARAFYEALIGDESSAPDSQRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSRPLLITFTPATDPSDLWKDGQQQPQPEKPESTLDGAAARAFYEALIGDESSAPDSQRS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 QTEPARERKRKKRRIMKAPAAEAVAEGASGRHGQGRSLEAEDKMTHRILRAAQEGDLPEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QTEPARERKRKKRRIMKAPAAEAVAEGASGRHGQGRSLEAEDKMTHRILRAAQEGDLPEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 RRLLEPHEAGGAGGNINARDAFWWTPLMCAARAGQGAAVSYLLGRGAAWVGVCELSGRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRLLEPHEAGGAGGNINARDAFWWTPLMCAARAGQGAAVSYLLGRGAAWVGVCELSGRDA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 AQLAEEAGFPEVARMVRESHGETRSPENRSPTPSLQYCENCDTHFQDSNHRTSTAHLLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AQLAEEAGFPEVARMVRESHGETRSPENRSPTPSLQYCENCDTHFQDSNHRTSTAHLLSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 SQGPQPPNLPLGVPISSPGFKLLLRGGWEPGMGLGPRGEGRANPIPTVLKRDQEGLGYRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQGPQPPNLPLGVPISSPGFKLLLRGGWEPGMGLGPRGEGRANPIPTVLKRDQEGLGYRS
250 260 270 280 290 300
310 320 330 340 350
pF1KB4 APQPRVTHFPAWDTRAVAGRERPPRVATLSWREERRREEKDRAWERDLRTYMNLEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APQPRVTHFPAWDTRAVAGRERPPRVATLSWREERRREEKDRAWERDLRTYMNLEF
310 320 330 340 350
>>XP_005249460 (OMIM: 142610) PREDICTED: G patch domain (356 aa)
initn: 2457 init1: 2457 opt: 2457 Z-score: 2040.5 bits: 386.1 E(85289): 6.4e-107
Smith-Waterman score: 2457; 100.0% identity (100.0% similar) in 356 aa overlap (1-356:1-356)
10 20 30 40 50 60
pF1KB4 MSRPLLITFTPATDPSDLWKDGQQQPQPEKPESTLDGAAARAFYEALIGDESSAPDSQRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSRPLLITFTPATDPSDLWKDGQQQPQPEKPESTLDGAAARAFYEALIGDESSAPDSQRS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 QTEPARERKRKKRRIMKAPAAEAVAEGASGRHGQGRSLEAEDKMTHRILRAAQEGDLPEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QTEPARERKRKKRRIMKAPAAEAVAEGASGRHGQGRSLEAEDKMTHRILRAAQEGDLPEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 RRLLEPHEAGGAGGNINARDAFWWTPLMCAARAGQGAAVSYLLGRGAAWVGVCELSGRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RRLLEPHEAGGAGGNINARDAFWWTPLMCAARAGQGAAVSYLLGRGAAWVGVCELSGRDA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 AQLAEEAGFPEVARMVRESHGETRSPENRSPTPSLQYCENCDTHFQDSNHRTSTAHLLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AQLAEEAGFPEVARMVRESHGETRSPENRSPTPSLQYCENCDTHFQDSNHRTSTAHLLSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 SQGPQPPNLPLGVPISSPGFKLLLRGGWEPGMGLGPRGEGRANPIPTVLKRDQEGLGYRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SQGPQPPNLPLGVPISSPGFKLLLRGGWEPGMGLGPRGEGRANPIPTVLKRDQEGLGYRS
250 260 270 280 290 300
310 320 330 340 350
pF1KB4 APQPRVTHFPAWDTRAVAGRERPPRVATLSWREERRREEKDRAWERDLRTYMNLEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 APQPRVTHFPAWDTRAVAGRERPPRVATLSWREERRREEKDRAWERDLRTYMNLEF
310 320 330 340 350
>>NP_001186167 (OMIM: 142610) G patch domain and ankyrin (356 aa)
initn: 2457 init1: 2457 opt: 2457 Z-score: 2040.5 bits: 386.1 E(85289): 6.4e-107
Smith-Waterman score: 2457; 100.0% identity (100.0% similar) in 356 aa overlap (1-356:1-356)
10 20 30 40 50 60
pF1KB4 MSRPLLITFTPATDPSDLWKDGQQQPQPEKPESTLDGAAARAFYEALIGDESSAPDSQRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSRPLLITFTPATDPSDLWKDGQQQPQPEKPESTLDGAAARAFYEALIGDESSAPDSQRS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 QTEPARERKRKKRRIMKAPAAEAVAEGASGRHGQGRSLEAEDKMTHRILRAAQEGDLPEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QTEPARERKRKKRRIMKAPAAEAVAEGASGRHGQGRSLEAEDKMTHRILRAAQEGDLPEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 RRLLEPHEAGGAGGNINARDAFWWTPLMCAARAGQGAAVSYLLGRGAAWVGVCELSGRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRLLEPHEAGGAGGNINARDAFWWTPLMCAARAGQGAAVSYLLGRGAAWVGVCELSGRDA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 AQLAEEAGFPEVARMVRESHGETRSPENRSPTPSLQYCENCDTHFQDSNHRTSTAHLLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AQLAEEAGFPEVARMVRESHGETRSPENRSPTPSLQYCENCDTHFQDSNHRTSTAHLLSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 SQGPQPPNLPLGVPISSPGFKLLLRGGWEPGMGLGPRGEGRANPIPTVLKRDQEGLGYRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQGPQPPNLPLGVPISSPGFKLLLRGGWEPGMGLGPRGEGRANPIPTVLKRDQEGLGYRS
250 260 270 280 290 300
310 320 330 340 350
pF1KB4 APQPRVTHFPAWDTRAVAGRERPPRVATLSWREERRREEKDRAWERDLRTYMNLEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APQPRVTHFPAWDTRAVAGRERPPRVATLSWREERRREEKDRAWERDLRTYMNLEF
310 320 330 340 350
>>NP_149417 (OMIM: 142610) G patch domain and ankyrin re (356 aa)
initn: 2457 init1: 2457 opt: 2457 Z-score: 2040.5 bits: 386.1 E(85289): 6.4e-107
Smith-Waterman score: 2457; 100.0% identity (100.0% similar) in 356 aa overlap (1-356:1-356)
10 20 30 40 50 60
pF1KB4 MSRPLLITFTPATDPSDLWKDGQQQPQPEKPESTLDGAAARAFYEALIGDESSAPDSQRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 MSRPLLITFTPATDPSDLWKDGQQQPQPEKPESTLDGAAARAFYEALIGDESSAPDSQRS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 QTEPARERKRKKRRIMKAPAAEAVAEGASGRHGQGRSLEAEDKMTHRILRAAQEGDLPEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 QTEPARERKRKKRRIMKAPAAEAVAEGASGRHGQGRSLEAEDKMTHRILRAAQEGDLPEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 RRLLEPHEAGGAGGNINARDAFWWTPLMCAARAGQGAAVSYLLGRGAAWVGVCELSGRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 RRLLEPHEAGGAGGNINARDAFWWTPLMCAARAGQGAAVSYLLGRGAAWVGVCELSGRDA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 AQLAEEAGFPEVARMVRESHGETRSPENRSPTPSLQYCENCDTHFQDSNHRTSTAHLLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 AQLAEEAGFPEVARMVRESHGETRSPENRSPTPSLQYCENCDTHFQDSNHRTSTAHLLSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 SQGPQPPNLPLGVPISSPGFKLLLRGGWEPGMGLGPRGEGRANPIPTVLKRDQEGLGYRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 SQGPQPPNLPLGVPISSPGFKLLLRGGWEPGMGLGPRGEGRANPIPTVLKRDQEGLGYRS
250 260 270 280 290 300
310 320 330 340 350
pF1KB4 APQPRVTHFPAWDTRAVAGRERPPRVATLSWREERRREEKDRAWERDLRTYMNLEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 APQPRVTHFPAWDTRAVAGRERPPRVATLSWREERRREEKDRAWERDLRTYMNLEF
310 320 330 340 350
>>NP_001186166 (OMIM: 142610) G patch domain and ankyrin (356 aa)
initn: 2457 init1: 2457 opt: 2457 Z-score: 2040.5 bits: 386.1 E(85289): 6.4e-107
Smith-Waterman score: 2457; 100.0% identity (100.0% similar) in 356 aa overlap (1-356:1-356)
10 20 30 40 50 60
pF1KB4 MSRPLLITFTPATDPSDLWKDGQQQPQPEKPESTLDGAAARAFYEALIGDESSAPDSQRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSRPLLITFTPATDPSDLWKDGQQQPQPEKPESTLDGAAARAFYEALIGDESSAPDSQRS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 QTEPARERKRKKRRIMKAPAAEAVAEGASGRHGQGRSLEAEDKMTHRILRAAQEGDLPEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QTEPARERKRKKRRIMKAPAAEAVAEGASGRHGQGRSLEAEDKMTHRILRAAQEGDLPEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 RRLLEPHEAGGAGGNINARDAFWWTPLMCAARAGQGAAVSYLLGRGAAWVGVCELSGRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRLLEPHEAGGAGGNINARDAFWWTPLMCAARAGQGAAVSYLLGRGAAWVGVCELSGRDA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 AQLAEEAGFPEVARMVRESHGETRSPENRSPTPSLQYCENCDTHFQDSNHRTSTAHLLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AQLAEEAGFPEVARMVRESHGETRSPENRSPTPSLQYCENCDTHFQDSNHRTSTAHLLSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 SQGPQPPNLPLGVPISSPGFKLLLRGGWEPGMGLGPRGEGRANPIPTVLKRDQEGLGYRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQGPQPPNLPLGVPISSPGFKLLLRGGWEPGMGLGPRGEGRANPIPTVLKRDQEGLGYRS
250 260 270 280 290 300
310 320 330 340 350
pF1KB4 APQPRVTHFPAWDTRAVAGRERPPRVATLSWREERRREEKDRAWERDLRTYMNLEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APQPRVTHFPAWDTRAVAGRERPPRVATLSWREERRREEKDRAWERDLRTYMNLEF
310 320 330 340 350
>>NP_001186168 (OMIM: 142610) G patch domain and ankyrin (356 aa)
initn: 2457 init1: 2457 opt: 2457 Z-score: 2040.5 bits: 386.1 E(85289): 6.4e-107
Smith-Waterman score: 2457; 100.0% identity (100.0% similar) in 356 aa overlap (1-356:1-356)
10 20 30 40 50 60
pF1KB4 MSRPLLITFTPATDPSDLWKDGQQQPQPEKPESTLDGAAARAFYEALIGDESSAPDSQRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSRPLLITFTPATDPSDLWKDGQQQPQPEKPESTLDGAAARAFYEALIGDESSAPDSQRS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 QTEPARERKRKKRRIMKAPAAEAVAEGASGRHGQGRSLEAEDKMTHRILRAAQEGDLPEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QTEPARERKRKKRRIMKAPAAEAVAEGASGRHGQGRSLEAEDKMTHRILRAAQEGDLPEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 RRLLEPHEAGGAGGNINARDAFWWTPLMCAARAGQGAAVSYLLGRGAAWVGVCELSGRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRLLEPHEAGGAGGNINARDAFWWTPLMCAARAGQGAAVSYLLGRGAAWVGVCELSGRDA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 AQLAEEAGFPEVARMVRESHGETRSPENRSPTPSLQYCENCDTHFQDSNHRTSTAHLLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AQLAEEAGFPEVARMVRESHGETRSPENRSPTPSLQYCENCDTHFQDSNHRTSTAHLLSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 SQGPQPPNLPLGVPISSPGFKLLLRGGWEPGMGLGPRGEGRANPIPTVLKRDQEGLGYRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQGPQPPNLPLGVPISSPGFKLLLRGGWEPGMGLGPRGEGRANPIPTVLKRDQEGLGYRS
250 260 270 280 290 300
310 320 330 340 350
pF1KB4 APQPRVTHFPAWDTRAVAGRERPPRVATLSWREERRREEKDRAWERDLRTYMNLEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APQPRVTHFPAWDTRAVAGRERPPRVATLSWREERRREEKDRAWERDLRTYMNLEF
310 320 330 340 350
356 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 05:50:03 2016 done: Sat Nov 5 05:50:04 2016
Total Scan time: 9.800 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]