Result of FASTA (ccds) for
pFN21AB4266
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4266, 511 aa
1>>>pF1KB4266 511 - 511 aa - 511 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8940+/-0.000865; mu= 15.4284+/- 0.052
mean_var=85.5550+/-17.398, 0's: 0 Z-trim(108.0): 135 B-trim: 52 in 1/48
Lambda= 0.138660
statistics sampled from 9776 (9931) to 9776 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.679), E-opt: 0.2 (0.305), width: 16
Scan time: 3.030
The best scores are: opt bits E(32554)
CCDS7827.1 KCNC1 gene_id:3746|Hs108|chr11 ( 511) 3508 711.9 4.4e-205
CCDS44547.1 KCNC1 gene_id:3746|Hs108|chr11 ( 585) 3444 699.1 3.5e-201
CCDS44193.1 KCNC4 gene_id:3749|Hs108|chr1 ( 626) 2501 510.5 2.3e-144
CCDS821.1 KCNC4 gene_id:3749|Hs108|chr1 ( 635) 2501 510.5 2.3e-144
CCDS58255.1 KCNC2 gene_id:3747|Hs108|chr12 ( 583) 1904 391.0 1.9e-108
CCDS9006.1 KCNC2 gene_id:3747|Hs108|chr12 ( 558) 1889 388.0 1.5e-107
CCDS9005.1 KCNC2 gene_id:3747|Hs108|chr12 ( 613) 1889 388.0 1.6e-107
CCDS58257.1 KCNC2 gene_id:3747|Hs108|chr12 ( 618) 1889 388.0 1.6e-107
CCDS58256.1 KCNC2 gene_id:3747|Hs108|chr12 ( 629) 1889 388.0 1.6e-107
CCDS9007.1 KCNC2 gene_id:3747|Hs108|chr12 ( 638) 1889 388.0 1.6e-107
CCDS12793.1 KCNC3 gene_id:3748|Hs108|chr19 ( 757) 1771 364.5 2.4e-100
CCDS826.1 KCNA10 gene_id:3744|Hs108|chr1 ( 511) 639 137.9 2.6e-32
CCDS8535.1 KCNA1 gene_id:3736|Hs108|chr12 ( 495) 636 137.3 3.8e-32
CCDS827.1 KCNA2 gene_id:3737|Hs108|chr1 ( 499) 631 136.3 7.6e-32
CCDS828.2 KCNA3 gene_id:3738|Hs108|chr1 ( 575) 628 135.8 1.3e-31
CCDS41629.1 KCNA4 gene_id:3739|Hs108|chr11 ( 653) 626 135.4 1.9e-31
CCDS12755.1 KCNA7 gene_id:3743|Hs108|chr19 ( 456) 602 130.5 3.9e-30
CCDS1809.1 KCNG3 gene_id:170850|Hs108|chr2 ( 436) 590 128.1 2e-29
CCDS6209.1 KCNB2 gene_id:9312|Hs108|chr8 ( 911) 547 119.7 1.4e-26
CCDS13418.1 KCNB1 gene_id:3745|Hs108|chr20 ( 858) 542 118.7 2.7e-26
CCDS12019.1 KCNG2 gene_id:26251|Hs108|chr18 ( 466) 523 114.7 2.3e-25
CCDS8534.1 KCNA6 gene_id:3742|Hs108|chr12 ( 529) 521 114.3 3.4e-25
CCDS8536.1 KCNA5 gene_id:3741|Hs108|chr12 ( 613) 505 111.2 3.5e-24
CCDS42674.1 KCNG3 gene_id:170850|Hs108|chr2 ( 425) 497 109.5 7.8e-24
CCDS1676.1 KCNF1 gene_id:3754|Hs108|chr2 ( 494) 451 100.3 5.2e-21
CCDS1692.1 KCNS3 gene_id:3790|Hs108|chr2 ( 491) 405 91.1 3.1e-18
CCDS6447.1 KCNV2 gene_id:169522|Hs108|chr9 ( 545) 392 88.5 2e-17
CCDS55625.1 KCNA2 gene_id:3737|Hs108|chr1 ( 356) 330 76.0 7.7e-14
CCDS13436.1 KCNG1 gene_id:3755|Hs108|chr20 ( 513) 309 71.9 1.9e-12
CCDS5776.1 KCND2 gene_id:3751|Hs108|chr7 ( 630) 310 72.2 2e-12
CCDS844.1 KCND3 gene_id:3752|Hs108|chr1 ( 636) 303 70.8 5.2e-12
CCDS843.1 KCND3 gene_id:3752|Hs108|chr1 ( 655) 303 70.8 5.4e-12
CCDS14314.1 KCND1 gene_id:3750|Hs108|chrX ( 647) 291 68.4 2.8e-11
CCDS13342.1 KCNS1 gene_id:3787|Hs108|chr20 ( 526) 286 67.3 4.7e-11
CCDS7736.1 KCNQ1 gene_id:3784|Hs108|chr11 ( 676) 285 67.2 6.7e-11
>>CCDS7827.1 KCNC1 gene_id:3746|Hs108|chr11 (511 aa)
initn: 3508 init1: 3508 opt: 3508 Z-score: 3795.4 bits: 711.9 E(32554): 4.4e-205
Smith-Waterman score: 3508; 100.0% identity (100.0% similar) in 511 aa overlap (1-511:1-511)
10 20 30 40 50 60
pF1KB4 MGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFFFDRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 MGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFFFDRH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 PGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAEEALD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 PGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAEEALD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 SFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRIWALF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 SFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRIWALF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 EDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYYREAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 EDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYYREAE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 TEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 TEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 KAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 KAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 TMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 TMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALC
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB4 ALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVVNSPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 ALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVVNSPH
430 440 450 460 470 480
490 500 510
pF1KB4 HSTQSDTCPLAQEEILEINRAGRKPLRGMSI
:::::::::::::::::::::::::::::::
CCDS78 HSTQSDTCPLAQEEILEINRAGRKPLRGMSI
490 500 510
>>CCDS44547.1 KCNC1 gene_id:3746|Hs108|chr11 (585 aa)
initn: 3528 init1: 3444 opt: 3444 Z-score: 3725.4 bits: 699.1 E(32554): 3.5e-201
Smith-Waterman score: 3444; 99.6% identity (99.6% similar) in 504 aa overlap (1-504:1-504)
10 20 30 40 50 60
pF1KB4 MGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFFFDRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFFFDRH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 PGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAEEALD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 PGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAEEALD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 SFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRIWALF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRIWALF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 EDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYYREAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYYREAE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 TEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 TEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 KAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 TMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 TMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALC
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB4 ALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVVNSPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVVNSPH
430 440 450 460 470 480
490 500 510
pF1KB4 HSTQSDTCPLAQEEILEINRAGRKPLRGMSI
::::::::::::::::::::: :
CCDS44 HSTQSDTCPLAQEEILEINRADSKLNGEVAKAALANEDCPHIDQALTPDEGLPFTRSGTR
490 500 510 520 530 540
>>CCDS44193.1 KCNC4 gene_id:3749|Hs108|chr1 (626 aa)
initn: 2488 init1: 1785 opt: 2501 Z-score: 2705.4 bits: 510.5 E(32554): 2.3e-144
Smith-Waterman score: 2501; 74.6% identity (86.1% similar) in 519 aa overlap (1-504:29-541)
10 20 30
pF1KB4 MGQGDESERIVINVGGTRHQTYRSTLRTLPGT
:..:. ::.:.::::::::.::::::::::::
CCDS44 MISSVCVSSYRGRKSGNKPPSKTCLKEEMAKGEASEKIIINVGGTRHETYRSTLRTLPGT
10 20 30 40 50 60
40 50 60 70 80
pF1KB4 RLAWLAEPDAHSHFDYDPRAD-----------EFFFDRHPGVFAHILNYYRTGKLHCPAD
::::::.::. .. . : . ::::::::::::..::::::::::::::
CCDS44 RLAWLADPDGGGRPETDGGGVGSSGSSGGGGCEFFFDRHPGVFAYVLNYYRTGKLHCPAD
70 80 90 100 110 120
90 100 110 120 130 140
pF1KB4 VCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAEEALDSFGGAPLDNSADDADADGPGD
:::::.::::.:::::::::::::::::::::::::::: : .: :.... : ::.:
CCDS44 VCGPLFEEELTFWGIDETDVEPCCWMTYRQHRDAEEALDIFE-SP-DGGGSGA---GPSD
130 140 150 160 170
150 160 170 180 190
pF1KB4 -SGDGEDELEMTKRLALSDSPDGRPGGFW--RRWQPRIWALFEDPYSSRYARYVAFASLF
.:: : :: . .::. .. :. .: : ::::.::::::::::: :: :::::::
CCDS44 EAGDDERELAL-QRLGPHEGGAGHGAGSGGCRGWQPRMWALFEDPYSSRAARVVAFASLF
180 190 200 210 220 230
200 210 220 230 240 250
pF1KB4 FILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYYREAETEAFLTYIEGVCVVWFTF
::::::::::::::: :: : ::: : : :.:.. ::.::: .:::::::::.:::.
CCDS44 FILVSITTFCLETHEAFNIDRNVTEILRVGNITSVHFRREVETEPILTYIEGVCVLWFTL
240 250 260 270 280 290
260 270 280 290 300 310
pF1KB4 EFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRI
:::.:.. ::. ..:.:: ::::::::::::::::::::::::::.::::::::::::::
CCDS44 EFLVRIVCCPDTLDFVKNLLNIIDFVAILPFYLEVGLSGLSSKAARDVLGFLRVVRFVRI
300 310 320 330 340 350
320 330 340 350 360 370
pF1KB4 LRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAQPNDPSA
:::::::::::::::::::::::::::::::::::::::::::::::::::::.:.:: .
CCDS44 LRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGARPSDPRG
360 370 380 390 400 410
380 390 400 410 420 430
pF1KB4 SEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNN
..:: :::::::::::::::::::::::::.:::::::::::::::::::::::::::::
CCDS44 NDHTDFKNIPIGFWWAVVTMTTLGYGDMYPKTWSGMLVGALCALAGVLTIAMPVPVIVNN
420 430 440 450 460 470
440 450 460 470 480 490
pF1KB4 FGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVVNSPHHSTQSDTCPLAQEE-ILE
:::::::::::::::::.:::.::: :: :: :::: .::. :: ::: : :.:: ..:
CCDS44 FGMYYSLAMAKQKLPKKRKKHVPRPAQLESPMYCKSEETSPRDSTCSDTSPPAREEGMIE
480 490 500 510 520 530
500 510
pF1KB4 INRAGRKPLRGMSI
.:: :
CCDS44 RKRADSKQNGDANAVLSDEEGAGLTQPLASSPTPEERRALRRSTTRDRNKKAAACFLLST
540 550 560 570 580 590
>>CCDS821.1 KCNC4 gene_id:3749|Hs108|chr1 (635 aa)
initn: 2488 init1: 1785 opt: 2501 Z-score: 2705.4 bits: 510.5 E(32554): 2.3e-144
Smith-Waterman score: 2501; 74.6% identity (86.1% similar) in 519 aa overlap (1-504:29-541)
10 20 30
pF1KB4 MGQGDESERIVINVGGTRHQTYRSTLRTLPGT
:..:. ::.:.::::::::.::::::::::::
CCDS82 MISSVCVSSYRGRKSGNKPPSKTCLKEEMAKGEASEKIIINVGGTRHETYRSTLRTLPGT
10 20 30 40 50 60
40 50 60 70 80
pF1KB4 RLAWLAEPDAHSHFDYDPRAD-----------EFFFDRHPGVFAHILNYYRTGKLHCPAD
::::::.::. .. . : . ::::::::::::..::::::::::::::
CCDS82 RLAWLADPDGGGRPETDGGGVGSSGSSGGGGCEFFFDRHPGVFAYVLNYYRTGKLHCPAD
70 80 90 100 110 120
90 100 110 120 130 140
pF1KB4 VCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAEEALDSFGGAPLDNSADDADADGPGD
:::::.::::.:::::::::::::::::::::::::::: : .: :.... : ::.:
CCDS82 VCGPLFEEELTFWGIDETDVEPCCWMTYRQHRDAEEALDIFE-SP-DGGGSGA---GPSD
130 140 150 160 170
150 160 170 180 190
pF1KB4 -SGDGEDELEMTKRLALSDSPDGRPGGFW--RRWQPRIWALFEDPYSSRYARYVAFASLF
.:: : :: . .::. .. :. .: : ::::.::::::::::: :: :::::::
CCDS82 EAGDDERELAL-QRLGPHEGGAGHGAGSGGCRGWQPRMWALFEDPYSSRAARVVAFASLF
180 190 200 210 220 230
200 210 220 230 240 250
pF1KB4 FILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYYREAETEAFLTYIEGVCVVWFTF
::::::::::::::: :: : ::: : : :.:.. ::.::: .:::::::::.:::.
CCDS82 FILVSITTFCLETHEAFNIDRNVTEILRVGNITSVHFRREVETEPILTYIEGVCVLWFTL
240 250 260 270 280 290
260 270 280 290 300 310
pF1KB4 EFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRI
:::.:.. ::. ..:.:: ::::::::::::::::::::::::::.::::::::::::::
CCDS82 EFLVRIVCCPDTLDFVKNLLNIIDFVAILPFYLEVGLSGLSSKAARDVLGFLRVVRFVRI
300 310 320 330 340 350
320 330 340 350 360 370
pF1KB4 LRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAQPNDPSA
:::::::::::::::::::::::::::::::::::::::::::::::::::::.:.:: .
CCDS82 LRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGARPSDPRG
360 370 380 390 400 410
380 390 400 410 420 430
pF1KB4 SEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNN
..:: :::::::::::::::::::::::::.:::::::::::::::::::::::::::::
CCDS82 NDHTDFKNIPIGFWWAVVTMTTLGYGDMYPKTWSGMLVGALCALAGVLTIAMPVPVIVNN
420 430 440 450 460 470
440 450 460 470 480 490
pF1KB4 FGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVVNSPHHSTQSDTCPLAQEE-ILE
:::::::::::::::::.:::.::: :: :: :::: .::. :: ::: : :.:: ..:
CCDS82 FGMYYSLAMAKQKLPKKRKKHVPRPAQLESPMYCKSEETSPRDSTCSDTSPPAREEGMIE
480 490 500 510 520 530
500 510
pF1KB4 INRAGRKPLRGMSI
.:: :
CCDS82 RKRADSKQNGDANAVLSDEEGAGLTQPLASSPTPEERRALRRSTTRDRNKKAAACFLLST
540 550 560 570 580 590
>>CCDS58255.1 KCNC2 gene_id:3747|Hs108|chr12 (583 aa)
initn: 2558 init1: 1555 opt: 1904 Z-score: 2060.5 bits: 391.0 E(32554): 1.9e-108
Smith-Waterman score: 2450; 70.3% identity (79.1% similar) in 556 aa overlap (7-510:7-547)
10 20 30 40
pF1KB4 MGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLA--EPDAHS-------------H
.::...:::::::.::::::.:::::::: :: :: .
CCDS58 MGKIENNERVILNVGGTRHETYRSTLKTLPGTRLALLASSEPPGDCLTTAGDKLQPSPPP
10 20 30 40 50 60
50 60 70
pF1KB4 FDYDPRAD--------------------------------EFFFDRHPGVFAHILNYYRT
.. ::: ::::::::::::..::::::
CCDS58 LSPPPRAPPLSPGPGGCFEGGAGNCSSRGGRASDHPGGGREFFFDRHPGVFAYVLNYYRT
70 80 90 100 110 120
80 90 100 110 120 130
pF1KB4 GKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAEEALDSFGGAPLDNSADD
:::::::::::::.::::::::::::::::::::::::::::::::: : .
CCDS58 GKLHCPADVCGPLFEEELAFWGIDETDVEPCCWMTYRQHRDAEEALDIF---------ET
130 140 150 160 170
140 150 160 170 180
pF1KB4 ADADGPGDSGDGEDELEMTKRLALSDS-----PDGRPGGFWRRWQPRIWALFEDPYSSRY
: : :: :: :: .:::.. :. :::. .: ::: :::.:::::::::::
CCDS58 PDLIG-GDPGDDED--LAAKRLGIEDAAGLGGPDGK-SGRWRRLQPRMWALFEDPYSSRA
180 190 200 210 220
190 200 210 220 230 240
pF1KB4 ARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYYREAETEAFLTYI
::..::::::::::::::::::::: :: . ::: : : :::.: : ::. :::.
CCDS58 ARFIAFASLFFILVSITTFCLETHEAFNIVKNKT--EPVINGTSVVLQYEIETDPALTYV
230 240 250 260 270 280
250 260 270 280 290 300
pF1KB4 EGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKAAKDVLG
:::::::::::::.:..: :::.::::: :::::::::::::::::::::::::::::::
CCDS58 EGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLG
290 300 310 320 330 340
310 320 330 340 350 360
pF1KB4 FLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAER
350 360 370 380 390 400
370 380 390 400 410 420
pF1KB4 IGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTI
.:::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTI
410 420 430 440 450 460
430 440 450 460 470 480
pF1KB4 AMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVVNSPHHSTQSDTC
:::::::::::::::::::::::::.:.::::: :: .::..::. .: .:::::::
CCDS58 AMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTC
470 480 490 500 510 520
490 500 510
pF1KB4 PLAQEEILEINRAGRKPLRGMSI
....:: ::.: . :...
CCDS58 LGKDNRLLEHNRSGYEKSRSLNNIAGLAGNALRLSPVTSPYNSPCPLRRSRSPIPSIL
530 540 550 560 570 580
>>CCDS9006.1 KCNC2 gene_id:3747|Hs108|chr12 (558 aa)
initn: 2585 init1: 1540 opt: 1889 Z-score: 2044.5 bits: 388.0 E(32554): 1.5e-107
Smith-Waterman score: 2435; 71.1% identity (79.3% similar) in 547 aa overlap (7-501:7-538)
10 20 30 40
pF1KB4 MGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLA--EPDAHS-------------H
.::...:::::::.::::::.:::::::: :: :: .
CCDS90 MGKIENNERVILNVGGTRHETYRSTLKTLPGTRLALLASSEPPGDCLTTAGDKLQPSPPP
10 20 30 40 50 60
50 60 70
pF1KB4 FDYDPRAD--------------------------------EFFFDRHPGVFAHILNYYRT
.. ::: ::::::::::::..::::::
CCDS90 LSPPPRAPPLSPGPGGCFEGGAGNCSSRGGRASDHPGGGREFFFDRHPGVFAYVLNYYRT
70 80 90 100 110 120
80 90 100 110 120 130
pF1KB4 GKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAEEALDSFGGAPLDNSADD
:::::::::::::.::::::::::::::::::::::::::::::::: : .
CCDS90 GKLHCPADVCGPLFEEELAFWGIDETDVEPCCWMTYRQHRDAEEALDIF---------ET
130 140 150 160 170
140 150 160 170 180
pF1KB4 ADADGPGDSGDGEDELEMTKRLALSDS-----PDGRPGGFWRRWQPRIWALFEDPYSSRY
: : :: :: :: .:::.. :. :::. .: ::: :::.:::::::::::
CCDS90 PDLIG-GDPGDDEDL--AAKRLGIEDAAGLGGPDGK-SGRWRRLQPRMWALFEDPYSSRA
180 190 200 210 220
190 200 210 220 230 240
pF1KB4 ARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYYREAETEAFLTYI
::..::::::::::::::::::::: :: . :::: : :::.: : ::. :::.
CCDS90 ARFIAFASLFFILVSITTFCLETHEAFNIVKNKTE--PVINGTSVVLQYEIETDPALTYV
230 240 250 260 270 280
250 260 270 280 290 300
pF1KB4 EGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKAAKDVLG
:::::::::::::.:..: :::.::::: :::::::::::::::::::::::::::::::
CCDS90 EGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLG
290 300 310 320 330 340
310 320 330 340 350 360
pF1KB4 FLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 FLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAER
350 360 370 380 390 400
370 380 390 400 410 420
pF1KB4 IGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTI
.:::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
CCDS90 VGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTI
410 420 430 440 450 460
430 440 450 460 470 480
pF1KB4 AMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVVNSPHHSTQSDTC
:::::::::::::::::::::::::.:.::::: :: .::..::. .: .:::::::
CCDS90 AMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTC
470 480 490 500 510 520
490 500 510
pF1KB4 PLAQEEILEINRAGRKPLRGMSI
....:: ::.
CCDS90 LGKDNRLLEHNRSDNCKEVVITGYTQAEARSLT
530 540 550
>>CCDS9005.1 KCNC2 gene_id:3747|Hs108|chr12 (613 aa)
initn: 2585 init1: 1540 opt: 1889 Z-score: 2043.9 bits: 388.0 E(32554): 1.6e-107
Smith-Waterman score: 2435; 71.1% identity (79.3% similar) in 547 aa overlap (7-501:7-538)
10 20 30 40
pF1KB4 MGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLA--EPDAHS-------------H
.::...:::::::.::::::.:::::::: :: :: .
CCDS90 MGKIENNERVILNVGGTRHETYRSTLKTLPGTRLALLASSEPPGDCLTTAGDKLQPSPPP
10 20 30 40 50 60
50 60 70
pF1KB4 FDYDPRAD--------------------------------EFFFDRHPGVFAHILNYYRT
.. ::: ::::::::::::..::::::
CCDS90 LSPPPRAPPLSPGPGGCFEGGAGNCSSRGGRASDHPGGGREFFFDRHPGVFAYVLNYYRT
70 80 90 100 110 120
80 90 100 110 120 130
pF1KB4 GKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAEEALDSFGGAPLDNSADD
:::::::::::::.::::::::::::::::::::::::::::::::: : .
CCDS90 GKLHCPADVCGPLFEEELAFWGIDETDVEPCCWMTYRQHRDAEEALDIF---------ET
130 140 150 160 170
140 150 160 170 180
pF1KB4 ADADGPGDSGDGEDELEMTKRLALSDS-----PDGRPGGFWRRWQPRIWALFEDPYSSRY
: : :: :: :: .:::.. :. :::. .: ::: :::.:::::::::::
CCDS90 PDLIG-GDPGDDEDL--AAKRLGIEDAAGLGGPDGK-SGRWRRLQPRMWALFEDPYSSRA
180 190 200 210 220
190 200 210 220 230 240
pF1KB4 ARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYYREAETEAFLTYI
::..::::::::::::::::::::: :: . :::: : :::.: : ::. :::.
CCDS90 ARFIAFASLFFILVSITTFCLETHEAFNIVKNKTE--PVINGTSVVLQYEIETDPALTYV
230 240 250 260 270 280
250 260 270 280 290 300
pF1KB4 EGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKAAKDVLG
:::::::::::::.:..: :::.::::: :::::::::::::::::::::::::::::::
CCDS90 EGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLG
290 300 310 320 330 340
310 320 330 340 350 360
pF1KB4 FLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 FLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAER
350 360 370 380 390 400
370 380 390 400 410 420
pF1KB4 IGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTI
.:::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
CCDS90 VGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTI
410 420 430 440 450 460
430 440 450 460 470 480
pF1KB4 AMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVVNSPHHSTQSDTC
:::::::::::::::::::::::::.:.::::: :: .::..::. .: .:::::::
CCDS90 AMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTC
470 480 490 500 510 520
490 500 510
pF1KB4 PLAQEEILEINRAGRKPLRGMSI
....:: ::.
CCDS90 LGKDNRLLEHNRSVLSGDDSTGSEPPLSPPERLPIRRSSTRDKNRRGETCFLLTTGDYTC
530 540 550 560 570 580
>>CCDS58257.1 KCNC2 gene_id:3747|Hs108|chr12 (618 aa)
initn: 2585 init1: 1540 opt: 1889 Z-score: 2043.9 bits: 388.0 E(32554): 1.6e-107
Smith-Waterman score: 2435; 71.1% identity (79.3% similar) in 547 aa overlap (7-501:7-538)
10 20 30 40
pF1KB4 MGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLA--EPDAHS-------------H
.::...:::::::.::::::.:::::::: :: :: .
CCDS58 MGKIENNERVILNVGGTRHETYRSTLKTLPGTRLALLASSEPPGDCLTTAGDKLQPSPPP
10 20 30 40 50 60
50 60 70
pF1KB4 FDYDPRAD--------------------------------EFFFDRHPGVFAHILNYYRT
.. ::: ::::::::::::..::::::
CCDS58 LSPPPRAPPLSPGPGGCFEGGAGNCSSRGGRASDHPGGGREFFFDRHPGVFAYVLNYYRT
70 80 90 100 110 120
80 90 100 110 120 130
pF1KB4 GKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAEEALDSFGGAPLDNSADD
:::::::::::::.::::::::::::::::::::::::::::::::: : .
CCDS58 GKLHCPADVCGPLFEEELAFWGIDETDVEPCCWMTYRQHRDAEEALDIF---------ET
130 140 150 160 170
140 150 160 170 180
pF1KB4 ADADGPGDSGDGEDELEMTKRLALSDS-----PDGRPGGFWRRWQPRIWALFEDPYSSRY
: : :: :: :: .:::.. :. :::. .: ::: :::.:::::::::::
CCDS58 PDLIG-GDPGDDEDL--AAKRLGIEDAAGLGGPDGK-SGRWRRLQPRMWALFEDPYSSRA
180 190 200 210 220
190 200 210 220 230 240
pF1KB4 ARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYYREAETEAFLTYI
::..::::::::::::::::::::: :: . :::: : :::.: : ::. :::.
CCDS58 ARFIAFASLFFILVSITTFCLETHEAFNIVKNKTE--PVINGTSVVLQYEIETDPALTYV
230 240 250 260 270 280
250 260 270 280 290 300
pF1KB4 EGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKAAKDVLG
:::::::::::::.:..: :::.::::: :::::::::::::::::::::::::::::::
CCDS58 EGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLG
290 300 310 320 330 340
310 320 330 340 350 360
pF1KB4 FLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAER
350 360 370 380 390 400
370 380 390 400 410 420
pF1KB4 IGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTI
.:::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTI
410 420 430 440 450 460
430 440 450 460 470 480
pF1KB4 AMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVVNSPHHSTQSDTC
:::::::::::::::::::::::::.:.::::: :: .::..::. .: .:::::::
CCDS58 AMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTC
470 480 490 500 510 520
490 500 510
pF1KB4 PLAQEEILEINRAGRKPLRGMSI
....:: ::.
CCDS58 LGKDNRLLEHNRSVLSGDDSTGSEPPLSPPERLPIRRSSTRDKNRRGETCFLLTTGDYTC
530 540 550 560 570 580
>>CCDS58256.1 KCNC2 gene_id:3747|Hs108|chr12 (629 aa)
initn: 2585 init1: 1540 opt: 1889 Z-score: 2043.8 bits: 388.0 E(32554): 1.6e-107
Smith-Waterman score: 2435; 71.1% identity (79.3% similar) in 547 aa overlap (7-501:7-538)
10 20 30 40
pF1KB4 MGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLA--EPDAHS-------------H
.::...:::::::.::::::.:::::::: :: :: .
CCDS58 MGKIENNERVILNVGGTRHETYRSTLKTLPGTRLALLASSEPPGDCLTTAGDKLQPSPPP
10 20 30 40 50 60
50 60 70
pF1KB4 FDYDPRAD--------------------------------EFFFDRHPGVFAHILNYYRT
.. ::: ::::::::::::..::::::
CCDS58 LSPPPRAPPLSPGPGGCFEGGAGNCSSRGGRASDHPGGGREFFFDRHPGVFAYVLNYYRT
70 80 90 100 110 120
80 90 100 110 120 130
pF1KB4 GKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAEEALDSFGGAPLDNSADD
:::::::::::::.::::::::::::::::::::::::::::::::: : .
CCDS58 GKLHCPADVCGPLFEEELAFWGIDETDVEPCCWMTYRQHRDAEEALDIF---------ET
130 140 150 160 170
140 150 160 170 180
pF1KB4 ADADGPGDSGDGEDELEMTKRLALSDS-----PDGRPGGFWRRWQPRIWALFEDPYSSRY
: : :: :: :: .:::.. :. :::. .: ::: :::.:::::::::::
CCDS58 PDLIG-GDPGDDEDL--AAKRLGIEDAAGLGGPDGK-SGRWRRLQPRMWALFEDPYSSRA
180 190 200 210 220
190 200 210 220 230 240
pF1KB4 ARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYYREAETEAFLTYI
::..::::::::::::::::::::: :: . :::: : :::.: : ::. :::.
CCDS58 ARFIAFASLFFILVSITTFCLETHEAFNIVKNKTE--PVINGTSVVLQYEIETDPALTYV
230 240 250 260 270 280
250 260 270 280 290 300
pF1KB4 EGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKAAKDVLG
:::::::::::::.:..: :::.::::: :::::::::::::::::::::::::::::::
CCDS58 EGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLG
290 300 310 320 330 340
310 320 330 340 350 360
pF1KB4 FLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAER
350 360 370 380 390 400
370 380 390 400 410 420
pF1KB4 IGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTI
.:::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTI
410 420 430 440 450 460
430 440 450 460 470 480
pF1KB4 AMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVVNSPHHSTQSDTC
:::::::::::::::::::::::::.:.::::: :: .::..::. .: .:::::::
CCDS58 AMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTC
470 480 490 500 510 520
490 500 510
pF1KB4 PLAQEEILEINRAGRKPLRGMSI
....:: ::.
CCDS58 LGKDNRLLEHNRSVLSGDDSTGSEPPLSPPERLPIRRSSTRDKNRRGETCFLLTTGDYTC
530 540 550 560 570 580
>>CCDS9007.1 KCNC2 gene_id:3747|Hs108|chr12 (638 aa)
initn: 2512 init1: 1540 opt: 1889 Z-score: 2043.7 bits: 388.0 E(32554): 1.6e-107
Smith-Waterman score: 2435; 71.1% identity (79.3% similar) in 547 aa overlap (7-501:7-538)
10 20 30 40
pF1KB4 MGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLA--EPDAHS-------------H
.::...:::::::.::::::.:::::::: :: :: .
CCDS90 MGKIENNERVILNVGGTRHETYRSTLKTLPGTRLALLASSEPPGDCLTTAGDKLQPSPPP
10 20 30 40 50 60
50 60 70
pF1KB4 FDYDPRAD--------------------------------EFFFDRHPGVFAHILNYYRT
.. ::: ::::::::::::..::::::
CCDS90 LSPPPRAPPLSPGPGGCFEGGAGNCSSRGGRASDHPGGGREFFFDRHPGVFAYVLNYYRT
70 80 90 100 110 120
80 90 100 110 120 130
pF1KB4 GKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAEEALDSFGGAPLDNSADD
:::::::::::::.::::::::::::::::::::::::::::::::: : .
CCDS90 GKLHCPADVCGPLFEEELAFWGIDETDVEPCCWMTYRQHRDAEEALDIF---------ET
130 140 150 160 170
140 150 160 170 180
pF1KB4 ADADGPGDSGDGEDELEMTKRLALSDS-----PDGRPGGFWRRWQPRIWALFEDPYSSRY
: : :: :: :: .:::.. :. :::. .: ::: :::.:::::::::::
CCDS90 PDLIG-GDPGDDEDL--AAKRLGIEDAAGLGGPDGK-SGRWRRLQPRMWALFEDPYSSRA
180 190 200 210 220
190 200 210 220 230 240
pF1KB4 ARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYYREAETEAFLTYI
::..::::::::::::::::::::: :: . :::: : :::.: : ::. :::.
CCDS90 ARFIAFASLFFILVSITTFCLETHEAFNIVKNKTE--PVINGTSVVLQYEIETDPALTYV
230 240 250 260 270 280
250 260 270 280 290 300
pF1KB4 EGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKAAKDVLG
:::::::::::::.:..: :::.::::: :::::::::::::::::::::::::::::::
CCDS90 EGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLG
290 300 310 320 330 340
310 320 330 340 350 360
pF1KB4 FLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 FLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAER
350 360 370 380 390 400
370 380 390 400 410 420
pF1KB4 IGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTI
.:::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
CCDS90 VGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTI
410 420 430 440 450 460
430 440 450 460 470 480
pF1KB4 AMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVVNSPHHSTQSDTC
:::::::::::::::::::::::::.:.::::: :: .::..::. .: .:::::::
CCDS90 AMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTC
470 480 490 500 510 520
490 500 510
pF1KB4 PLAQEEILEINRAGRKPLRGMSI
....:: ::.
CCDS90 LGKDNRLLEHNRSVLSGDDSTGSEPPLSPPERLPIRRSSTRDKNRRGETCFLLTTGDYTC
530 540 550 560 570 580
511 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 05:45:23 2016 done: Sat Nov 5 05:45:23 2016
Total Scan time: 3.030 Total Display time: 0.150
Function used was FASTA [36.3.4 Apr, 2011]