(Linear) (Six-base) MAPSORT of: KIEE3436.seq Check: 816 from: 1 to: 2787 KIEE3436.orf With 182 enzymes: SgfI * March 22, 2012 16:34 .. AccI GT'mk_AC Cuts at: 0 105 1488 2787 Size: 105 1383 1299 Fragments arranged by size: 1383 1299 105 Acc65I G'GTAC_C Cuts at: 0 1155 2787 Size: 1155 1632 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 460 506 1024 1115 2327 2787 Size: 460 46 518 91 1212 460 Fragments arranged by size: 1212 518 460 460 91 46 AflIII A'CryG_T Cuts at: 0 906 2787 Size: 906 1881 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 1607 1639 2787 Size: 1607 32 1148 Fragments arranged by size: 1607 1148 32 AlwNI CAG_nnn'CTG Cuts at: 0 2085 2787 Size: 2085 702 ApaLI G'TGCA_C Cuts at: 0 2116 2787 Size: 2116 671 ApoI r'AATT_y Cuts at: 0 91 226 634 660 1112 1135 1518 1601 Size: 91 135 408 26 452 23 383 83 Cuts at: 1601 1634 2301 2787 Size: 33 667 486 Fragments arranged by size: 667 486 452 408 383 135 91 83 33 26 23 AseI AT'TA_AT Cuts at: 0 1222 2787 Size: 1222 1565 BanI G'GyrC_C Cuts at: 0 1155 2787 Size: 1155 1632 BanII G_rGCy'C Cuts at: 0 1400 2787 Size: 1400 1387 BbsI GAAGACnn'nnnn_ Cuts at: 0 670 2787 Size: 670 2117 BbvCI CC'TCA_GC Cuts at: 0 1190 2787 Size: 1190 1597 BglII A'GATC_T Cuts at: 0 2775 2787 Size: 2775 12 Bme1580I G_kGCm'C Cuts at: 0 2120 2787 Size: 2120 667 BmrI ACTGGGnnnn_n' Cuts at: 0 405 2787 Size: 405 2382 BmtI G_CTAG'C Cuts at: 0 136 2762 2787 Size: 136 2626 25 Fragments arranged by size: 2626 136 25 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 2483 2787 Size: 2483 304 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 407 1849 2787 Size: 407 1442 938 Fragments arranged by size: 1442 938 407 Bpu10I CC'TnA_GC Cuts at: 0 1190 1533 2787 Size: 1190 343 1254 Fragments arranged by size: 1254 1190 343 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 2597 2787 Size: 2597 190 BsaBI GATnn'nnATC Cuts at: 0 953 2787 Size: 953 1834 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 278 1912 2600 2787 Size: 278 1634 688 187 Fragments arranged by size: 1634 688 278 187 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1013 1126 2787 Size: 1013 113 1661 Fragments arranged by size: 1661 1013 113 BsiHKAI G_wGCw'C Cuts at: 0 1368 1400 2120 2787 Size: 1368 32 720 667 Fragments arranged by size: 1368 720 667 32 BsmI GAATG_Cn' Cuts at: 0 1201 2787 Size: 1201 1586 Bsp1286I G_dGCh'C Cuts at: 0 1368 1400 2120 2787 Size: 1368 32 720 667 Fragments arranged by size: 1368 720 667 32 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 1626 2787 Size: 1626 1161 BsrDI GCAATG_nn' Cuts at: 0 110 132 2769 2787 Size: 110 22 2637 18 Fragments arranged by size: 2637 110 22 18 BsrGI T'GTAC_A Cuts at: 0 352 2787 Size: 352 2435 BstXI CCAn_nnnn'nTGG Cuts at: 0 2588 2787 Size: 2588 199 BstYI r'GATC_y Cuts at: 0 865 1388 2775 2787 Size: 865 523 1387 12 Fragments arranged by size: 1387 865 523 12 Bsu36I CC'TnA_GG Cuts at: 0 890 2787 Size: 890 1897 BtgI C'CryG_G Cuts at: 0 1352 2252 2787 Size: 1352 900 535 Fragments arranged by size: 1352 900 535 BtsI GCAGTG_nn' Cuts at: 0 516 1000 1983 2787 Size: 516 484 983 804 Fragments arranged by size: 983 804 516 484 DraI TTT'AAA Cuts at: 0 2771 2787 Size: 2771 16 EaeI y'GGCC_r Cuts at: 0 1697 2787 Size: 1697 1090 EarI CTCTTCn'nnn_ Cuts at: 0 19 2787 Size: 19 2768 EcoICRI GAG'CTC Cuts at: 0 1398 2787 Size: 1398 1389 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 407 460 506 1024 1115 1849 2327 2787 Size: 407 53 46 518 91 734 478 460 Fragments arranged by size: 734 518 478 460 407 91 53 46 EcoNI CCTnn'n_nnAGG Cuts at: 0 2612 2787 Size: 2612 175 EcoO109I rG'GnC_Cy Cuts at: 0 654 2787 Size: 654 2133 EcoRV GAT'ATC Cuts at: 0 1581 2787 Size: 1581 1206 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 990 1810 2787 Size: 990 820 977 Fragments arranged by size: 990 977 820 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 1429 1461 2164 2196 2787 Size: 1429 32 703 32 591 Fragments arranged by size: 1429 703 591 32 32 HincII GTy'rAC Cuts at: 0 106 167 278 807 2787 Size: 106 61 111 529 1980 Fragments arranged by size: 1980 529 111 106 61 HpaI GTT'AAC Cuts at: 0 278 2787 Size: 278 2509 KpnI G_GTAC'C Cuts at: 0 1159 2787 Size: 1159 1628 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 294 824 958 1441 2382 2647 2787 Size: 294 530 134 483 941 265 140 Fragments arranged by size: 941 530 483 294 265 140 134 MslI CAynn'nnrTG Cuts at: 0 509 1527 2167 2263 2506 2787 Size: 509 1018 640 96 243 281 Fragments arranged by size: 1018 640 509 281 243 96 MspA1I CmG'CkG Cuts at: 0 49 1695 2787 Size: 49 1646 1092 Fragments arranged by size: 1646 1092 49 NcoI C'CATG_G Cuts at: 0 1352 2252 2787 Size: 1352 900 535 Fragments arranged by size: 1352 900 535 NheI G'CTAG_C Cuts at: 0 132 2758 2787 Size: 132 2626 29 Fragments arranged by size: 2626 132 29 NspI r_CATG'y Cuts at: 0 910 2358 2787 Size: 910 1448 429 Fragments arranged by size: 1448 910 429 PciI A'CATG_T Cuts at: 0 906 2787 Size: 906 1881 PfoI T'CCnGG_A Cuts at: 0 1391 2787 Size: 1391 1396 PpuMI rG'GwC_Cy Cuts at: 0 654 2787 Size: 654 2133 PsiI TTA'TAA Cuts at: 0 440 2787 Size: 440 2347 PvuII CAG'CTG Cuts at: 0 49 1695 2787 Size: 49 1646 1092 Fragments arranged by size: 1646 1092 49 SacI G_AGCT'C Cuts at: 0 1400 2787 Size: 1400 1387 SalI G'TCGA_C Cuts at: 0 104 2787 Size: 104 2683 SanDI GG'GwC_CC Cuts at: 0 654 2787 Size: 654 2133 ScaI AGT'ACT Cuts at: 0 30 2232 2787 Size: 30 2202 555 Fragments arranged by size: 2202 555 30 SfcI C'TryA_G Cuts at: 0 2382 2787 Size: 2382 405 SmlI C'TyrA_G Cuts at: 0 2612 2787 Size: 2612 175 SpeI A'CTAG_T Cuts at: 0 58 2787 Size: 58 2729 SspI AAT'ATT Cuts at: 0 694 1009 1917 2787 Size: 694 315 908 870 Fragments arranged by size: 908 870 694 315 StyI C'CwwG_G Cuts at: 0 1352 1610 2252 2787 Size: 1352 258 642 535 Fragments arranged by size: 1352 642 535 258 TatI w'GTAC_w Cuts at: 0 28 352 1569 1654 2230 2787 Size: 28 324 1217 85 576 557 Fragments arranged by size: 1217 576 557 324 85 28 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 2229 2261 2787 Size: 2229 32 526 Fragments arranged by size: 2229 526 32 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 339 1692 2418 2787 Size: 339 1353 726 369 Fragments arranged by size: 1353 726 369 339 Enzymes that do cut: AccI Acc65I AcuI AflIII AloI AlwNI ApaLI ApoI AseI BanI BanII BbsI BbvCI BglII Bme1580I BmrI BmtI BplI BpmI Bpu10I BpuEI BsaBI BseRI BsgI BsiHKAI BsmI Bsp1286I BspMI BsrDI BsrGI BstXI BstYI Bsu36I BtgI BtsI DraI EaeI EarI EcoICRI Eco57MI EcoNI EcoO109I EcoRV FalI Hin4I HincII HpaI KpnI MmeI MslI MspA1I NcoI NheI NspI PciI PfoI PpuMI PsiI PvuII SacI SalI SanDI ScaI SfcI SmlI SpeI SspI StyI TatI TstI XcmI Enzymes that do not cut: AarI AatII AclI AfeI AflII AgeI AhdI AleI AlfI ApaI AscI AsiSI AvaI AvrII BaeI BamHI BbeI BcgI BciVI BclI BfrBI BglI BlpI BmgBI BsaI BsaAI BsaHI BsaWI BsaXI BseYI BsiEI BsiWI BsmBI BspEI BspHI BsrBI BsrFI BssHII BssSI BstAPI BstBI BstEII BstZ17I BtgZI ClaI CspCI DraIII DrdI EagI EciI EcoRI FseI FspI FspAI HaeII HindIII KasI MfeI MluI MscI NaeI NarI NdeI NgoMIV NotI NruI NsiI PacI PasI PflMI PmeI PmlI PpiI PshAI PspOMI PspXI PsrI PstI PvuI RsrII SacII SapI SbfI SexAI SfiI SfoI SgfI SgrAI SmaI SnaBI SphI SrfI StuI SwaI TaqII Tth111I XbaI XhoI XmaI XmnI ZraI