FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3225, 517 aa 1>>>pF1KE3225 517 - 517 aa - 517 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.4069+/-0.000376; mu= 8.6020+/- 0.023 mean_var=129.9595+/-27.617, 0's: 0 Z-trim(117.0): 160 B-trim: 857 in 1/53 Lambda= 0.112505 statistics sampled from 28521 (28715) to 28521 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.697), E-opt: 0.2 (0.337), width: 16 Scan time: 10.760 The best scores are: opt bits E(85289) NP_116052 (OMIM: 612492) ubiquitin carboxyl-termin ( 517) 3558 589.0 1.1e-167 XP_005254019 (OMIM: 612492) PREDICTED: ubiquitin c ( 516) 3539 585.9 9.4e-167 NP_001288104 (OMIM: 612492) ubiquitin carboxyl-ter ( 486) 3373 559.0 1.2e-158 XP_006719716 (OMIM: 612492) PREDICTED: ubiquitin c ( 486) 3373 559.0 1.2e-158 XP_005254022 (OMIM: 612492) PREDICTED: ubiquitin c ( 456) 2740 456.2 9.3e-128 XP_016875537 (OMIM: 612492) PREDICTED: ubiquitin c ( 554) 2703 450.3 7e-126 XP_016875538 (OMIM: 612492) PREDICTED: ubiquitin c ( 553) 2684 447.2 5.9e-125 XP_011537196 (OMIM: 612492) PREDICTED: ubiquitin c ( 368) 2566 427.9 2.5e-119 XP_016875541 (OMIM: 612492) PREDICTED: ubiquitin c ( 523) 2518 420.2 7.3e-117 XP_016875540 (OMIM: 612492) PREDICTED: ubiquitin c ( 523) 2518 420.2 7.3e-117 XP_016875539 (OMIM: 612492) PREDICTED: ubiquitin c ( 523) 2518 420.2 7.3e-117 XP_016875542 (OMIM: 612492) PREDICTED: ubiquitin c ( 493) 1885 317.5 5.9e-86 XP_016875543 (OMIM: 612492) PREDICTED: ubiquitin c ( 405) 1711 289.2 1.6e-77 XP_016878256 (OMIM: 604728) PREDICTED: ubiquitin c ( 435) 247 51.6 5.7e-06 XP_016878255 (OMIM: 604728) PREDICTED: ubiquitin c ( 435) 247 51.6 5.7e-06 NP_001243631 (OMIM: 604728) ubiquitin carboxyl-ter ( 476) 247 51.6 6.2e-06 XP_016878252 (OMIM: 604728) PREDICTED: ubiquitin c ( 498) 247 51.6 6.4e-06 XP_016878253 (OMIM: 604728) PREDICTED: ubiquitin c ( 498) 247 51.6 6.4e-06 XP_016878254 (OMIM: 604728) PREDICTED: ubiquitin c ( 498) 247 51.6 6.4e-06 NP_006528 (OMIM: 604728) ubiquitin carboxyl-termin ( 520) 247 51.6 6.6e-06 NP_001306777 (OMIM: 604729) ubiquitin carboxyl-ter ( 551) 234 49.5 3e-05 NP_001014443 (OMIM: 604729) ubiquitin carboxyl-ter ( 565) 234 49.5 3.1e-05 NP_036607 (OMIM: 604729) ubiquitin carboxyl-termin ( 565) 234 49.5 3.1e-05 XP_016856529 (OMIM: 604729) PREDICTED: ubiquitin c ( 594) 234 49.5 3.2e-05 NP_001306776 (OMIM: 604729) ubiquitin carboxyl-ter ( 594) 234 49.5 3.2e-05 XP_016856530 (OMIM: 604729) PREDICTED: ubiquitin c ( 455) 219 47.0 0.00014 XP_016856528 (OMIM: 604729) PREDICTED: ubiquitin c ( 639) 219 47.1 0.00018 XP_016856527 (OMIM: 604729) PREDICTED: ubiquitin c ( 639) 219 47.1 0.00018 XP_016856526 (OMIM: 604729) PREDICTED: ubiquitin c ( 639) 219 47.1 0.00018 XP_016856525 (OMIM: 604729) PREDICTED: ubiquitin c ( 668) 219 47.1 0.00019 XP_016880723 (OMIM: 607740) PREDICTED: ubiquitin c (1288) 208 45.5 0.0011 XP_011523681 (OMIM: 607740) PREDICTED: ubiquitin c (1327) 208 45.5 0.0012 XP_016880722 (OMIM: 607740) PREDICTED: ubiquitin c (1558) 208 45.5 0.0013 XP_011523680 (OMIM: 607740) PREDICTED: ubiquitin c (1572) 208 45.6 0.0013 XP_011523678 (OMIM: 607740) PREDICTED: ubiquitin c (1601) 208 45.6 0.0014 NP_115971 (OMIM: 607740) ubiquitin carboxyl-termin (1604) 208 45.6 0.0014 XP_011523677 (OMIM: 607740) PREDICTED: ubiquitin c (1608) 208 45.6 0.0014 XP_011523676 (OMIM: 607740) PREDICTED: ubiquitin c (1615) 208 45.6 0.0014 XP_011523675 (OMIM: 607740) PREDICTED: ubiquitin c (1618) 208 45.6 0.0014 XP_011523674 (OMIM: 607740) PREDICTED: ubiquitin c (1620) 208 45.6 0.0014 XP_011523673 (OMIM: 607740) PREDICTED: ubiquitin c (1634) 208 45.6 0.0014 XP_011522361 (OMIM: 604334) PREDICTED: ubiquitin c ( 786) 202 44.4 0.0015 NP_955475 (OMIM: 603486) ubiquitin carboxyl-termin ( 916) 203 44.6 0.0015 NP_003354 (OMIM: 603486) ubiquitin carboxyl-termin ( 963) 203 44.6 0.0016 XP_006719781 (OMIM: 604731) PREDICTED: ubiquitin c ( 775) 200 44.1 0.0018 XP_011522360 (OMIM: 604334) PREDICTED: ubiquitin c (1031) 202 44.5 0.0019 XP_016875773 (OMIM: 604731) PREDICTED: ubiquitin c ( 860) 200 44.1 0.002 XP_016875774 (OMIM: 604731) PREDICTED: ubiquitin c ( 860) 200 44.1 0.002 NP_006304 (OMIM: 604731) ubiquitin carboxyl-termin ( 952) 200 44.1 0.0022 NP_001239007 (OMIM: 604731) ubiquitin carboxyl-ter ( 981) 200 44.1 0.0022 >>NP_116052 (OMIM: 612492) ubiquitin carboxyl-terminal h (517 aa) initn: 3558 init1: 3558 opt: 3558 Z-score: 3131.4 bits: 589.0 E(85289): 1.1e-167 Smith-Waterman score: 3558; 100.0% identity (100.0% similar) in 517 aa overlap (1-517:1-517) 10 20 30 40 50 60 pF1KE3 MLSSRAEAAMTAADRAIQRFLRTGAAVRYKVMKNWGVIGGIAAALAAGIYVIWGPITERK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 MLSSRAEAAMTAADRAIQRFLRTGAAVRYKVMKNWGVIGGIAAALAAGIYVIWGPITERK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 KRRKGLVPGLVNLGNTCFMNSLLQGLSACPAFIRWLEEFTSQYSRDQKEPPSHQYLSLTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 KRRKGLVPGLVNLGNTCFMNSLLQGLSACPAFIRWLEEFTSQYSRDQKEPPSHQYLSLTL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LHLLKALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 LHLLKALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDRQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 PRVTHLFDVHSLEQQSEITPKQITCRTRGSPHPTSNHWKSQHPFHGRLTSNMVCKHCEHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 PRVTHLFDVHSLEQQSEITPKQITCRTRGSPHPTSNHWKSQHPFHGRLTSNMVCKHCEHQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 SPVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNGEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 SPVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNGEK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 VEHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKYHLLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 VEHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKYHLLG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 HKPSQHNPKLNKNPGPTLELQDGPGAPTPVLNQPGAPKTQIFMNGACSPSLLPTLSAPMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 HKPSQHNPKLNKNPGPTLELQDGPGAPTPVLNQPGAPKTQIFMNGACSPSLLPTLSAPMP 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 FPLPVVPDYSSSTYLFRLMAVVVHHGDMHSGHFVTYRRSPPSARNPLSTSNQWLWVSDDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 FPLPVVPDYSSSTYLFRLMAVVVHHGDMHSGHFVTYRRSPPSARNPLSTSNQWLWVSDDT 430 440 450 460 470 480 490 500 510 pF1KE3 VRKASLQEVLSSSAYLLFYERVLSRMQHQSQECKSEE ::::::::::::::::::::::::::::::::::::: NP_116 VRKASLQEVLSSSAYLLFYERVLSRMQHQSQECKSEE 490 500 510 >>XP_005254019 (OMIM: 612492) PREDICTED: ubiquitin carbo (516 aa) initn: 2274 init1: 2274 opt: 3539 Z-score: 3114.8 bits: 585.9 E(85289): 9.4e-167 Smith-Waterman score: 3539; 99.8% identity (99.8% similar) in 517 aa overlap (1-517:1-516) 10 20 30 40 50 60 pF1KE3 MLSSRAEAAMTAADRAIQRFLRTGAAVRYKVMKNWGVIGGIAAALAAGIYVIWGPITERK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MLSSRAEAAMTAADRAIQRFLRTGAAVRYKVMKNWGVIGGIAAALAAGIYVIWGPITERK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 KRRKGLVPGLVNLGNTCFMNSLLQGLSACPAFIRWLEEFTSQYSRDQKEPPSHQYLSLTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 KRRKGLVPGLVNLGNTCFMNSLLQGLSACPAFIRWLEEFTSQYSRDQKEPPSHQYLSLTL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LHLLKALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LHLLKALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDRQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 PRVTHLFDVHSLEQQSEITPKQITCRTRGSPHPTSNHWKSQHPFHGRLTSNMVCKHCEHQ :::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::: XP_005 PRVTHLFDVHSLEQ-SEITPKQITCRTRGSPHPTSNHWKSQHPFHGRLTSNMVCKHCEHQ 190 200 210 220 230 250 260 270 280 290 300 pF1KE3 SPVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNGEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SPVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNGEK 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE3 VEHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKYHLLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VEHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKYHLLG 300 310 320 330 340 350 370 380 390 400 410 420 pF1KE3 HKPSQHNPKLNKNPGPTLELQDGPGAPTPVLNQPGAPKTQIFMNGACSPSLLPTLSAPMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 HKPSQHNPKLNKNPGPTLELQDGPGAPTPVLNQPGAPKTQIFMNGACSPSLLPTLSAPMP 360 370 380 390 400 410 430 440 450 460 470 480 pF1KE3 FPLPVVPDYSSSTYLFRLMAVVVHHGDMHSGHFVTYRRSPPSARNPLSTSNQWLWVSDDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 FPLPVVPDYSSSTYLFRLMAVVVHHGDMHSGHFVTYRRSPPSARNPLSTSNQWLWVSDDT 420 430 440 450 460 470 490 500 510 pF1KE3 VRKASLQEVLSSSAYLLFYERVLSRMQHQSQECKSEE ::::::::::::::::::::::::::::::::::::: XP_005 VRKASLQEVLSSSAYLLFYERVLSRMQHQSQECKSEE 480 490 500 510 >>NP_001288104 (OMIM: 612492) ubiquitin carboxyl-termina (486 aa) initn: 3373 init1: 3373 opt: 3373 Z-score: 2969.5 bits: 559.0 E(85289): 1.2e-158 Smith-Waterman score: 3373; 100.0% identity (100.0% similar) in 486 aa overlap (32-517:1-486) 10 20 30 40 50 60 pF1KE3 LSSRAEAAMTAADRAIQRFLRTGAAVRYKVMKNWGVIGGIAAALAAGIYVIWGPITERKK :::::::::::::::::::::::::::::: NP_001 MKNWGVIGGIAAALAAGIYVIWGPITERKK 10 20 30 70 80 90 100 110 120 pF1KE3 RRKGLVPGLVNLGNTCFMNSLLQGLSACPAFIRWLEEFTSQYSRDQKEPPSHQYLSLTLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RRKGLVPGLVNLGNTCFMNSLLQGLSACPAFIRWLEEFTSQYSRDQKEPPSHQYLSLTLL 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE3 HLLKALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDRQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 HLLKALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDRQP 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE3 RVTHLFDVHSLEQQSEITPKQITCRTRGSPHPTSNHWKSQHPFHGRLTSNMVCKHCEHQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RVTHLFDVHSLEQQSEITPKQITCRTRGSPHPTSNHWKSQHPFHGRLTSNMVCKHCEHQS 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE3 PVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNGEKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNGEKV 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE3 EHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKYHLLGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKYHLLGH 280 290 300 310 320 330 370 380 390 400 410 420 pF1KE3 KPSQHNPKLNKNPGPTLELQDGPGAPTPVLNQPGAPKTQIFMNGACSPSLLPTLSAPMPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KPSQHNPKLNKNPGPTLELQDGPGAPTPVLNQPGAPKTQIFMNGACSPSLLPTLSAPMPF 340 350 360 370 380 390 430 440 450 460 470 480 pF1KE3 PLPVVPDYSSSTYLFRLMAVVVHHGDMHSGHFVTYRRSPPSARNPLSTSNQWLWVSDDTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PLPVVPDYSSSTYLFRLMAVVVHHGDMHSGHFVTYRRSPPSARNPLSTSNQWLWVSDDTV 400 410 420 430 440 450 490 500 510 pF1KE3 RKASLQEVLSSSAYLLFYERVLSRMQHQSQECKSEE :::::::::::::::::::::::::::::::::::: NP_001 RKASLQEVLSSSAYLLFYERVLSRMQHQSQECKSEE 460 470 480 >>XP_006719716 (OMIM: 612492) PREDICTED: ubiquitin carbo (486 aa) initn: 3373 init1: 3373 opt: 3373 Z-score: 2969.5 bits: 559.0 E(85289): 1.2e-158 Smith-Waterman score: 3373; 100.0% identity (100.0% similar) in 486 aa overlap (32-517:1-486) 10 20 30 40 50 60 pF1KE3 LSSRAEAAMTAADRAIQRFLRTGAAVRYKVMKNWGVIGGIAAALAAGIYVIWGPITERKK :::::::::::::::::::::::::::::: XP_006 MKNWGVIGGIAAALAAGIYVIWGPITERKK 10 20 30 70 80 90 100 110 120 pF1KE3 RRKGLVPGLVNLGNTCFMNSLLQGLSACPAFIRWLEEFTSQYSRDQKEPPSHQYLSLTLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 RRKGLVPGLVNLGNTCFMNSLLQGLSACPAFIRWLEEFTSQYSRDQKEPPSHQYLSLTLL 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE3 HLLKALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDRQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 HLLKALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDRQP 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE3 RVTHLFDVHSLEQQSEITPKQITCRTRGSPHPTSNHWKSQHPFHGRLTSNMVCKHCEHQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 RVTHLFDVHSLEQQSEITPKQITCRTRGSPHPTSNHWKSQHPFHGRLTSNMVCKHCEHQS 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE3 PVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNGEKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 PVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNGEKV 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE3 EHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKYHLLGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 EHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKYHLLGH 280 290 300 310 320 330 370 380 390 400 410 420 pF1KE3 KPSQHNPKLNKNPGPTLELQDGPGAPTPVLNQPGAPKTQIFMNGACSPSLLPTLSAPMPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 KPSQHNPKLNKNPGPTLELQDGPGAPTPVLNQPGAPKTQIFMNGACSPSLLPTLSAPMPF 340 350 360 370 380 390 430 440 450 460 470 480 pF1KE3 PLPVVPDYSSSTYLFRLMAVVVHHGDMHSGHFVTYRRSPPSARNPLSTSNQWLWVSDDTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 PLPVVPDYSSSTYLFRLMAVVVHHGDMHSGHFVTYRRSPPSARNPLSTSNQWLWVSDDTV 400 410 420 430 440 450 490 500 510 pF1KE3 RKASLQEVLSSSAYLLFYERVLSRMQHQSQECKSEE :::::::::::::::::::::::::::::::::::: XP_006 RKASLQEVLSSSAYLLFYERVLSRMQHQSQECKSEE 460 470 480 >>XP_005254022 (OMIM: 612492) PREDICTED: ubiquitin carbo (456 aa) initn: 2740 init1: 2740 opt: 2740 Z-score: 2414.7 bits: 456.2 E(85289): 9.3e-128 Smith-Waterman score: 3010; 88.2% identity (88.2% similar) in 517 aa overlap (1-517:1-456) 10 20 30 40 50 60 pF1KE3 MLSSRAEAAMTAADRAIQRFLRTGAAVRYKVMKNWGVIGGIAAALAAGIYVIWGPITERK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MLSSRAEAAMTAADRAIQRFLRTGAAVRYKVMKNWGVIGGIAAALAAGIYVIWGPITERK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 KRRKGLVPGLVNLGNTCFMNSLLQGLSACPAFIRWLEEFTSQYSRDQKEPPSHQYLSLTL :::: XP_005 KRRK-------------------------------------------------------- 130 140 150 160 170 180 pF1KE3 LHLLKALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDRQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 -----ALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDRQ 70 80 90 100 110 190 200 210 220 230 240 pF1KE3 PRVTHLFDVHSLEQQSEITPKQITCRTRGSPHPTSNHWKSQHPFHGRLTSNMVCKHCEHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 PRVTHLFDVHSLEQQSEITPKQITCRTRGSPHPTSNHWKSQHPFHGRLTSNMVCKHCEHQ 120 130 140 150 160 170 250 260 270 280 290 300 pF1KE3 SPVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNGEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SPVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNGEK 180 190 200 210 220 230 310 320 330 340 350 360 pF1KE3 VEHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKYHLLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VEHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKYHLLG 240 250 260 270 280 290 370 380 390 400 410 420 pF1KE3 HKPSQHNPKLNKNPGPTLELQDGPGAPTPVLNQPGAPKTQIFMNGACSPSLLPTLSAPMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 HKPSQHNPKLNKNPGPTLELQDGPGAPTPVLNQPGAPKTQIFMNGACSPSLLPTLSAPMP 300 310 320 330 340 350 430 440 450 460 470 480 pF1KE3 FPLPVVPDYSSSTYLFRLMAVVVHHGDMHSGHFVTYRRSPPSARNPLSTSNQWLWVSDDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 FPLPVVPDYSSSTYLFRLMAVVVHHGDMHSGHFVTYRRSPPSARNPLSTSNQWLWVSDDT 360 370 380 390 400 410 490 500 510 pF1KE3 VRKASLQEVLSSSAYLLFYERVLSRMQHQSQECKSEE ::::::::::::::::::::::::::::::::::::: XP_005 VRKASLQEVLSSSAYLLFYERVLSRMQHQSQECKSEE 420 430 440 450 >>XP_016875537 (OMIM: 612492) PREDICTED: ubiquitin carbo (554 aa) initn: 2752 init1: 2702 opt: 2703 Z-score: 2381.0 bits: 450.3 E(85289): 7e-126 Smith-Waterman score: 3438; 93.3% identity (93.3% similar) in 549 aa overlap (1-512:1-549) 10 20 30 40 50 60 pF1KE3 MLSSRAEAAMTAADRAIQRFLRTGAAVRYKVMKNWGVIGGIAAALAAGIYVIWGPITERK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MLSSRAEAAMTAADRAIQRFLRTGAAVRYKVMKNWGVIGGIAAALAAGIYVIWGPITERK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 KRRKGLVPGLVNLGNTCFMNSLLQGLSACPAFIRWLEEFTSQYSRDQKEPPSHQYLSLTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KRRKGLVPGLVNLGNTCFMNSLLQGLSACPAFIRWLEEFTSQYSRDQKEPPSHQYLSLTL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LHLLKALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LHLLKALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDRQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 PRVTHLFDVHSLEQQSEITPKQITCRTRGSPHPTSNHWKSQHPFHGRLTSNMVCKHCEHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PRVTHLFDVHSLEQQSEITPKQITCRTRGSPHPTSNHWKSQHPFHGRLTSNMVCKHCEHQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 SPVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNGEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SPVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNGEK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 VEHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKYHLLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VEHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKYHLLG 310 320 330 340 350 360 370 380 pF1KE3 HKPSQHNPKLNKNPGPTLELQDGPGAPTP------------------------------- ::::::::::::::::::::::::::::: XP_016 HKPSQHNPKLNKNPGPTLELQDGPGAPTPGVCARGADAAGIFSTEKSSLASPPSGSLMTG 370 380 390 400 410 420 390 400 410 420 430 440 pF1KE3 ------VLNQPGAPKTQIFMNGACSPSLLPTLSAPMPFPLPVVPDYSSSTYLFRLMAVVV :::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AQGLYNVLNQPGAPKTQIFMNGACSPSLLPTLSAPMPFPLPVVPDYSSSTYLFRLMAVVV 430 440 450 460 470 480 450 460 470 480 490 500 pF1KE3 HHGDMHSGHFVTYRRSPPSARNPLSTSNQWLWVSDDTVRKASLQEVLSSSAYLLFYERVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 HHGDMHSGHFVTYRRSPPSARNPLSTSNQWLWVSDDTVRKASLQEVLSSSAYLLFYERVL 490 500 510 520 530 540 510 pF1KE3 SRMQHQSQECKSEE ::::::::: XP_016 SRMQHQSQECKSEE 550 >>XP_016875538 (OMIM: 612492) PREDICTED: ubiquitin carbo (553 aa) initn: 2141 init1: 1418 opt: 2684 Z-score: 2364.3 bits: 447.2 E(85289): 5.9e-125 Smith-Waterman score: 3419; 93.1% identity (93.1% similar) in 549 aa overlap (1-512:1-548) 10 20 30 40 50 60 pF1KE3 MLSSRAEAAMTAADRAIQRFLRTGAAVRYKVMKNWGVIGGIAAALAAGIYVIWGPITERK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MLSSRAEAAMTAADRAIQRFLRTGAAVRYKVMKNWGVIGGIAAALAAGIYVIWGPITERK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 KRRKGLVPGLVNLGNTCFMNSLLQGLSACPAFIRWLEEFTSQYSRDQKEPPSHQYLSLTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KRRKGLVPGLVNLGNTCFMNSLLQGLSACPAFIRWLEEFTSQYSRDQKEPPSHQYLSLTL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LHLLKALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LHLLKALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDRQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 PRVTHLFDVHSLEQQSEITPKQITCRTRGSPHPTSNHWKSQHPFHGRLTSNMVCKHCEHQ :::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::: XP_016 PRVTHLFDVHSLEQ-SEITPKQITCRTRGSPHPTSNHWKSQHPFHGRLTSNMVCKHCEHQ 190 200 210 220 230 250 260 270 280 290 300 pF1KE3 SPVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNGEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SPVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNGEK 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE3 VEHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKYHLLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VEHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKYHLLG 300 310 320 330 340 350 370 380 pF1KE3 HKPSQHNPKLNKNPGPTLELQDGPGAPTP------------------------------- ::::::::::::::::::::::::::::: XP_016 HKPSQHNPKLNKNPGPTLELQDGPGAPTPGVCARGADAAGIFSTEKSSLASPPSGSLMTG 360 370 380 390 400 410 390 400 410 420 430 440 pF1KE3 ------VLNQPGAPKTQIFMNGACSPSLLPTLSAPMPFPLPVVPDYSSSTYLFRLMAVVV :::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AQGLYNVLNQPGAPKTQIFMNGACSPSLLPTLSAPMPFPLPVVPDYSSSTYLFRLMAVVV 420 430 440 450 460 470 450 460 470 480 490 500 pF1KE3 HHGDMHSGHFVTYRRSPPSARNPLSTSNQWLWVSDDTVRKASLQEVLSSSAYLLFYERVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 HHGDMHSGHFVTYRRSPPSARNPLSTSNQWLWVSDDTVRKASLQEVLSSSAYLLFYERVL 480 490 500 510 520 530 510 pF1KE3 SRMQHQSQECKSEE ::::::::: XP_016 SRMQHQSQECKSEE 540 550 >>XP_011537196 (OMIM: 612492) PREDICTED: ubiquitin carbo (368 aa) initn: 2274 init1: 2274 opt: 2566 Z-score: 2263.4 bits: 427.9 E(85289): 2.5e-119 Smith-Waterman score: 2566; 99.7% identity (99.7% similar) in 369 aa overlap (149-517:1-368) 120 130 140 150 160 170 pF1KE3 TLLHLLKALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERD :::::::::::::::::::::::::::::: XP_011 MYRWQISSFEEQDAHELFHVITSSLEDERD 10 20 30 180 190 200 210 220 230 pF1KE3 RQPRVTHLFDVHSLEQQSEITPKQITCRTRGSPHPTSNHWKSQHPFHGRLTSNMVCKHCE :::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: XP_011 RQPRVTHLFDVHSLEQ-SEITPKQITCRTRGSPHPTSNHWKSQHPFHGRLTSNMVCKHCE 40 50 60 70 80 240 250 260 270 280 290 pF1KE3 HQSPVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 HQSPVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNG 90 100 110 120 130 140 300 310 320 330 340 350 pF1KE3 EKVEHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKYHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EKVEHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKYHL 150 160 170 180 190 200 360 370 380 390 400 410 pF1KE3 LGHKPSQHNPKLNKNPGPTLELQDGPGAPTPVLNQPGAPKTQIFMNGACSPSLLPTLSAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LGHKPSQHNPKLNKNPGPTLELQDGPGAPTPVLNQPGAPKTQIFMNGACSPSLLPTLSAP 210 220 230 240 250 260 420 430 440 450 460 470 pF1KE3 MPFPLPVVPDYSSSTYLFRLMAVVVHHGDMHSGHFVTYRRSPPSARNPLSTSNQWLWVSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MPFPLPVVPDYSSSTYLFRLMAVVVHHGDMHSGHFVTYRRSPPSARNPLSTSNQWLWVSD 270 280 290 300 310 320 480 490 500 510 pF1KE3 DTVRKASLQEVLSSSAYLLFYERVLSRMQHQSQECKSEE ::::::::::::::::::::::::::::::::::::::: XP_011 DTVRKASLQEVLSSSAYLLFYERVLSRMQHQSQECKSEE 330 340 350 360 >>XP_016875541 (OMIM: 612492) PREDICTED: ubiquitin carbo (523 aa) initn: 2567 init1: 2517 opt: 2518 Z-score: 2219.0 bits: 420.2 E(85289): 7.3e-117 Smith-Waterman score: 3253; 92.9% identity (92.9% similar) in 518 aa overlap (32-512:1-518) 10 20 30 40 50 60 pF1KE3 LSSRAEAAMTAADRAIQRFLRTGAAVRYKVMKNWGVIGGIAAALAAGIYVIWGPITERKK :::::::::::::::::::::::::::::: XP_016 MKNWGVIGGIAAALAAGIYVIWGPITERKK 10 20 30 70 80 90 100 110 120 pF1KE3 RRKGLVPGLVNLGNTCFMNSLLQGLSACPAFIRWLEEFTSQYSRDQKEPPSHQYLSLTLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RRKGLVPGLVNLGNTCFMNSLLQGLSACPAFIRWLEEFTSQYSRDQKEPPSHQYLSLTLL 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE3 HLLKALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDRQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 HLLKALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDRQP 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE3 RVTHLFDVHSLEQQSEITPKQITCRTRGSPHPTSNHWKSQHPFHGRLTSNMVCKHCEHQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RVTHLFDVHSLEQQSEITPKQITCRTRGSPHPTSNHWKSQHPFHGRLTSNMVCKHCEHQS 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE3 PVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNGEKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNGEKV 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE3 EHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKYHLLGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKYHLLGH 280 290 300 310 320 330 370 380 pF1KE3 KPSQHNPKLNKNPGPTLELQDGPGAPTP-------------------------------- :::::::::::::::::::::::::::: XP_016 KPSQHNPKLNKNPGPTLELQDGPGAPTPGVCARGADAAGIFSTEKSSLASPPSGSLMTGA 340 350 360 370 380 390 390 400 410 420 430 440 pF1KE3 -----VLNQPGAPKTQIFMNGACSPSLLPTLSAPMPFPLPVVPDYSSSTYLFRLMAVVVH ::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QGLYNVLNQPGAPKTQIFMNGACSPSLLPTLSAPMPFPLPVVPDYSSSTYLFRLMAVVVH 400 410 420 430 440 450 450 460 470 480 490 500 pF1KE3 HGDMHSGHFVTYRRSPPSARNPLSTSNQWLWVSDDTVRKASLQEVLSSSAYLLFYERVLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 HGDMHSGHFVTYRRSPPSARNPLSTSNQWLWVSDDTVRKASLQEVLSSSAYLLFYERVLS 460 470 480 490 500 510 510 pF1KE3 RMQHQSQECKSEE :::::::: XP_016 RMQHQSQECKSEE 520 >>XP_016875540 (OMIM: 612492) PREDICTED: ubiquitin carbo (523 aa) initn: 2567 init1: 2517 opt: 2518 Z-score: 2219.0 bits: 420.2 E(85289): 7.3e-117 Smith-Waterman score: 3253; 92.9% identity (92.9% similar) in 518 aa overlap (32-512:1-518) 10 20 30 40 50 60 pF1KE3 LSSRAEAAMTAADRAIQRFLRTGAAVRYKVMKNWGVIGGIAAALAAGIYVIWGPITERKK :::::::::::::::::::::::::::::: XP_016 MKNWGVIGGIAAALAAGIYVIWGPITERKK 10 20 30 70 80 90 100 110 120 pF1KE3 RRKGLVPGLVNLGNTCFMNSLLQGLSACPAFIRWLEEFTSQYSRDQKEPPSHQYLSLTLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RRKGLVPGLVNLGNTCFMNSLLQGLSACPAFIRWLEEFTSQYSRDQKEPPSHQYLSLTLL 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE3 HLLKALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDRQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 HLLKALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDRQP 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE3 RVTHLFDVHSLEQQSEITPKQITCRTRGSPHPTSNHWKSQHPFHGRLTSNMVCKHCEHQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RVTHLFDVHSLEQQSEITPKQITCRTRGSPHPTSNHWKSQHPFHGRLTSNMVCKHCEHQS 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE3 PVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNGEKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNGEKV 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE3 EHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKYHLLGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKYHLLGH 280 290 300 310 320 330 370 380 pF1KE3 KPSQHNPKLNKNPGPTLELQDGPGAPTP-------------------------------- :::::::::::::::::::::::::::: XP_016 KPSQHNPKLNKNPGPTLELQDGPGAPTPGVCARGADAAGIFSTEKSSLASPPSGSLMTGA 340 350 360 370 380 390 390 400 410 420 430 440 pF1KE3 -----VLNQPGAPKTQIFMNGACSPSLLPTLSAPMPFPLPVVPDYSSSTYLFRLMAVVVH ::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QGLYNVLNQPGAPKTQIFMNGACSPSLLPTLSAPMPFPLPVVPDYSSSTYLFRLMAVVVH 400 410 420 430 440 450 450 460 470 480 490 500 pF1KE3 HGDMHSGHFVTYRRSPPSARNPLSTSNQWLWVSDDTVRKASLQEVLSSSAYLLFYERVLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 HGDMHSGHFVTYRRSPPSARNPLSTSNQWLWVSDDTVRKASLQEVLSSSAYLLFYERVLS 460 470 480 490 500 510 510 pF1KE3 RMQHQSQECKSEE :::::::: XP_016 RMQHQSQECKSEE 520 517 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 23:37:48 2016 done: Sat Nov 5 23:37:50 2016 Total Scan time: 10.760 Total Display time: 0.110 Function used was FASTA [36.3.4 Apr, 2011]