Result of FASTA (ccds) for
pFN21AB3659
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3659, 312 aa
1>>>pF1KB3659 312 - 312 aa - 312 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0471+/-0.000953; mu= 16.6798+/- 0.057
mean_var=63.5167+/-12.765, 0's: 0 Z-trim(104.6): 76 B-trim: 411 in 1/47
Lambda= 0.160928
statistics sampled from 7914 (7992) to 7914 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.626), E-opt: 0.2 (0.245), width: 16
Scan time: 2.420
The best scores are: opt bits E(32554)
CCDS8229.1 UCP3 gene_id:7352|Hs108|chr11 ( 312) 2073 490.1 9.2e-139
CCDS44677.1 UCP3 gene_id:7352|Hs108|chr11 ( 275) 1828 433.2 1.1e-121
CCDS8228.1 UCP2 gene_id:7351|Hs108|chr11 ( 309) 1476 351.5 4.8e-97
CCDS3753.1 UCP1 gene_id:7350|Hs108|chr4 ( 307) 1182 283.2 1.7e-76
CCDS43470.1 SLC25A27 gene_id:9481|Hs108|chr6 ( 323) 613 151.2 1e-36
CCDS76021.1 SLC25A14 gene_id:9016|Hs108|chrX ( 290) 605 149.3 3.4e-36
CCDS14624.1 SLC25A14 gene_id:9016|Hs108|chrX ( 322) 605 149.3 3.7e-36
CCDS14623.1 SLC25A14 gene_id:9016|Hs108|chrX ( 325) 605 149.3 3.8e-36
CCDS31967.1 SLC25A30 gene_id:253512|Hs108|chr13 ( 291) 589 145.6 4.5e-35
CCDS11059.1 SLC25A11 gene_id:8402|Hs108|chr17 ( 314) 571 141.4 8.7e-34
CCDS66539.1 SLC25A30 gene_id:253512|Hs108|chr13 ( 240) 560 138.8 4.1e-33
CCDS11786.1 SLC25A10 gene_id:1468|Hs108|chr17 ( 287) 519 129.3 3.5e-30
CCDS59301.1 SLC25A10 gene_id:1468|Hs108|chr17 ( 296) 491 122.8 3.2e-28
CCDS54069.1 SLC25A11 gene_id:8402|Hs108|chr17 ( 263) 466 117.0 1.6e-26
CCDS162.1 SLC25A34 gene_id:284723|Hs108|chr1 ( 304) 443 111.7 7.5e-25
CCDS56431.1 SLC25A27 gene_id:9481|Hs108|chr6 ( 245) 393 100.0 2e-21
CCDS82067.1 SLC25A35 gene_id:399512|Hs108|chr17 ( 300) 387 98.7 6.1e-21
CCDS2779.1 SLC25A20 gene_id:788|Hs108|chr3 ( 301) 354 91.0 1.2e-18
CCDS76020.1 SLC25A14 gene_id:9016|Hs108|chrX ( 353) 344 88.7 7e-18
CCDS13758.1 SLC25A1 gene_id:6576|Hs108|chr22 ( 311) 320 83.1 3e-16
CCDS11138.1 SLC25A35 gene_id:399512|Hs108|chr17 ( 295) 319 82.9 3.4e-16
CCDS786.1 SLC25A24 gene_id:29957|Hs108|chr1 ( 458) 300 78.6 1e-14
CCDS6890.1 SLC25A25 gene_id:114789|Hs108|chr9 ( 469) 300 78.6 1e-14
CCDS41361.1 SLC25A24 gene_id:29957|Hs108|chr1 ( 477) 300 78.6 1.1e-14
CCDS48031.1 SLC25A25 gene_id:114789|Hs108|chr9 ( 489) 300 78.6 1.1e-14
CCDS59146.1 SLC25A25 gene_id:114789|Hs108|chr9 ( 501) 300 78.6 1.1e-14
CCDS35151.1 SLC25A25 gene_id:114789|Hs108|chr9 ( 503) 300 78.6 1.1e-14
CCDS83420.1 SLC25A25 gene_id:114789|Hs108|chr9 ( 515) 300 78.6 1.1e-14
CCDS32882.1 SLC25A23 gene_id:79085|Hs108|chr19 ( 468) 293 77.0 3.2e-14
CCDS9959.1 SLC25A47 gene_id:283600|Hs108|chr14 ( 308) 269 71.3 1.1e-12
CCDS14005.1 SLC25A17 gene_id:10478|Hs108|chr22 ( 307) 268 71.0 1.3e-12
CCDS41671.1 SLC25A45 gene_id:283130|Hs108|chr11 ( 246) 258 68.7 5.3e-12
CCDS60850.1 SLC25A45 gene_id:283130|Hs108|chr11 ( 264) 258 68.7 5.7e-12
CCDS41670.1 SLC25A45 gene_id:283130|Hs108|chr11 ( 288) 258 68.7 6.1e-12
CCDS74817.1 SLC25A1 gene_id:6576|Hs108|chr22 ( 208) 254 67.7 8.9e-12
CCDS55913.1 SLC25A21 gene_id:89874|Hs108|chr14 ( 298) 254 67.8 1.2e-11
CCDS9663.1 SLC25A21 gene_id:89874|Hs108|chr14 ( 299) 254 67.8 1.2e-11
CCDS74176.1 SLC25A10 gene_id:1468|Hs108|chr17 ( 406) 254 67.9 1.5e-11
CCDS76431.1 SLC25A45 gene_id:283130|Hs108|chr11 ( 226) 245 65.6 4e-11
>>CCDS8229.1 UCP3 gene_id:7352|Hs108|chr11 (312 aa)
initn: 2073 init1: 2073 opt: 2073 Z-score: 2604.7 bits: 490.1 E(32554): 9.2e-139
Smith-Waterman score: 2073; 100.0% identity (100.0% similar) in 312 aa overlap (1-312:1-312)
10 20 30 40 50 60
pF1KB3 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAVQTARLVQYRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAVQTARLVQYRG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 VLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKGADNSSLTTRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 VLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKGADNSSLTTRI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTIAREEGVRGLWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 LAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTIAREEGVRGLWK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 GTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 GTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVDV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 VKTRYMNSPPGQYFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQLKRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 VKTRYMNSPPGQYFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQLKRA
250 260 270 280 290 300
310
pF1KB3 LMKVQMLRESPF
::::::::::::
CCDS82 LMKVQMLRESPF
310
>>CCDS44677.1 UCP3 gene_id:7352|Hs108|chr11 (275 aa)
initn: 1828 init1: 1828 opt: 1828 Z-score: 2298.1 bits: 433.2 E(32554): 1.1e-121
Smith-Waterman score: 1828; 100.0% identity (100.0% similar) in 275 aa overlap (1-275:1-275)
10 20 30 40 50 60
pF1KB3 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAVQTARLVQYRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAVQTARLVQYRG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 VLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKGADNSSLTTRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKGADNSSLTTRI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTIAREEGVRGLWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTIAREEGVRGLWK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 GTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVDV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 VKTRYMNSPPGQYFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQLKRA
:::::::::::::::::::::::::::::::::::
CCDS44 VKTRYMNSPPGQYFSPLDCMIKMVAQEGPTAFYKG
250 260 270
310
pF1KB3 LMKVQMLRESPF
>>CCDS8228.1 UCP2 gene_id:7351|Hs108|chr11 (309 aa)
initn: 1412 init1: 778 opt: 1476 Z-score: 1855.7 bits: 351.5 E(32554): 4.8e-97
Smith-Waterman score: 1476; 72.2% identity (87.5% similar) in 313 aa overlap (1-312:1-309)
10 20 30 40 50
pF1KB3 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQA-VQTARLVQYR
:::.: .::::: .:::::::::::.:::.::::::::::::::::.:. :... .:::
CCDS82 MVGFKATDVPPTATVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGPVRATASAQYR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB3 GVLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKGADNSSLTTR
::.:::::::::::: : ::::::::::::::::.:::::::::: :: ::....:. .:
CCDS82 GVMGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYT-KGSEHASIGSR
70 80 90 100 110
120 130 140 150 160 170
pF1KB3 ILAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTIAREEGVRGLW
.::: ::::.::. :::::::::::::. . : . :.:..:..::.::::::: ::::
CCDS82 LLAGSTTGALAVAVAQPTDVVKVRFQAQARAG---GGRRYQSTVNAYKTIAREEGFRGLW
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB3 KGTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVD
::: ::. :::::::::.::::..:. :: .:.::..::::.::::::::.::.:::::
CCDS82 KGTSPNVARNAIVNCAELVTYDLIKDALLKANLMTDDLPCHFTSAFGAGFCTTVIASPVD
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB3 VVKTRYMNSPPGQYFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQLKR
::::::::: ::: : : . :. .::: :::::: ::::::::::::::::::::::
CCDS82 VVKTRYMNSALGQYSSAGHCALTMLQKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKR
240 250 260 270 280 290
300 310
pF1KB3 ALMKVQMLRESPF
::: . ::.::
CCDS82 ALMAACTSREAPF
300
>>CCDS3753.1 UCP1 gene_id:7350|Hs108|chr4 (307 aa)
initn: 1257 init1: 662 opt: 1182 Z-score: 1486.9 bits: 283.2 E(32554): 1.7e-76
Smith-Waterman score: 1182; 58.7% identity (81.8% similar) in 303 aa overlap (1-303:1-298)
10 20 30 40 50 60
pF1KB3 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAVQTARLVQYRG
: :: ::: ::..:....:: :::.::..::::::::::::.::: :. ...:.:
CCDS37 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGE---CPTSSVIRYKG
10 20 30 40 50
70 80 90 100 110 120
pF1KB3 VLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKGADNSSLTTRI
::::: ..:.::: . :.:: ::::::.: ::.::::::.:.. : :: ..:
CCDS37 VLGTITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKI
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB3 LAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTIAREEGVRGLWK
::: :::..:: .:::.:::::.::. :: . .:.::..::: :: ::. ::::
CCDS37 LAGLTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKP--RYTGTYNAYRIIATTEGLTGLWK
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB3 GTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVDV
:: ::.::..:.::.:.::::..:: .. ..:.:. :::.:::. ::::::...:::::
CCDS37 GTTPNLMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDV
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB3 VKTRYMNSPPGQYFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQLKRA
::::..::::::: : .: .:. ..::::::.::..:::::::::::.::: .:::::
CCDS37 VKTRFINSPPGQYKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLKRE
240 250 260 270 280 290
310
pF1KB3 LMKVQMLRESPF
: :
CCDS37 LSKSRQTMDCAT
300
>>CCDS43470.1 SLC25A27 gene_id:9481|Hs108|chr6 (323 aa)
initn: 570 init1: 285 opt: 613 Z-score: 772.6 bits: 151.2 E(32554): 1e-36
Smith-Waterman score: 613; 35.5% identity (65.2% similar) in 310 aa overlap (14-312:20-323)
10 20 30 40 50
pF1KB3 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAVQT--
: ::: .: :: :.:.::::: .:.:::.::: ..
CCDS43 MSVPEEEERLLPLTQRWPRASKFLLSGCAATVAELATFPLDLTKTRLQMQGEAALARLGD
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB3 -ARL-VQYRGVLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKG
:: . :::.. : : ... :: . ..:.. .. :.. ... :. :. ...: :.
CCDS43 GARESAPYRGMVRTALGIIEEEGFLKLWQGVTPAIYRHVVYSGGRMVTYEHLREVVFGKS
70 80 90 100 110 120
120 130 140 150 160
pF1KB3 ADNS-SLTTRILAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTI
:. : ...: .:... :.:::.:::..: . . .. :. :. :
CCDS43 EDEHYPLWKSVIGGMMAGVIGQFLANPTDLVKVQMQMEGKRKLEGKPLRFRGVHHAFAKI
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB3 AREEGVRGLWKGTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGF
: :.:::: : .:::.: :.:: ....::: .:. :. : ::. : .:.. .:.
CCDS43 LAEGGIRGLWAGWVPNIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNIMTHGLSSLCSGL
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB3 CATVVASPVDVVKTRYMNSPPGQ------YFSPLDCMIKMVAQEGPTAFYKGFTPSFLRL
:.....:.::.:.: ::.: . : : ::.:. : :: ..:::: ::.::.
CCDS43 VASILGTPADVIKSRIMNQPRDKQGRGLLYKSSTDCLIQAVQGEGFMSLYKGFLPSWLRM
250 260 270 280 290 300
290 300 310
pF1KB3 GSWNVVMFVTYEQLKRALMKVQMLRESPF
:..:...:::... .: :::
CCDS43 TPWSMVFWLTYEKIR------EMSGVSPF
310 320
>>CCDS76021.1 SLC25A14 gene_id:9016|Hs108|chrX (290 aa)
initn: 667 init1: 235 opt: 605 Z-score: 763.2 bits: 149.3 E(32554): 3.4e-36
Smith-Waterman score: 676; 38.8% identity (73.2% similar) in 291 aa overlap (17-299:9-287)
10 20 30 40 50
pF1KB3 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAVQTARL--VQY
:. .: :. :.. :::.: .:.:::.:: :... ::. ..:
CCDS76 MSGLNWKPFVYGGLASIVAEFGTFPVDLTKTRLQVQG--QSID-ARFKEIKY
10 20 30 40
60 70 80 90 100 110
pF1KB3 RGVLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKGADNSSLTT
::.. ... . . :: . :.:.. .: :: :...:.::.:.:.:.... . :.. :
CCDS76 RGMFHALFRICKEEGVLALYSGIAPALLRQASYGTIKIGIYQSLKRLFVERLEDET-LLI
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB3 RILAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTM-DAYRTIAREEGVRG
.. : ..:... : :.::::.:.:.::. : ..:.: .. : ..::.::
CCDS76 NMICGVVSGVISSTIANPTDVLKIRMQAQGSL--------FQGSMIGSFIDIYQQEGTRG
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB3 LWKGTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASP
::.:..:. .: ::: .:. .::: :..:. .. :.. ::::.: :. ......:
CCDS76 LWRGVVPTAQRAAIVVGVELPVYDITKKHLILSGMMGDTILTHFVSSFTCGLAGALASNP
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB3 VDVVKTRYMNSPP--GQ---YFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLGSWNVVMFV
::::.::.::. :. : . .: ..:: .:: :.:::: :..:::: ::...:.
CCDS76 VDVVRTRMMNQRAIVGHVDLYKGTVDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFI
230 240 250 260 270 280
300 310
pF1KB3 TYEQLKRALMKVQMLRESPF
:::::::
CCDS76 TYEQLKRLQI
290
>>CCDS14624.1 SLC25A14 gene_id:9016|Hs108|chrX (322 aa)
initn: 667 init1: 235 opt: 605 Z-score: 762.6 bits: 149.3 E(32554): 3.7e-36
Smith-Waterman score: 676; 38.8% identity (73.2% similar) in 291 aa overlap (17-299:41-319)
10 20 30 40
pF1KB3 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGE
:. .: :. :.. :::.: .:.:::.::
CCDS14 FLRVKFATAAVIHQKSTTVSHEMSGLNWKPFVYGGLASIVAEFGTFPVDLTKTRLQVQG-
20 30 40 50 60
50 60 70 80 90 100
pF1KB3 NQAVQTARL--VQYRGVLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQ
:... ::. ..:::.. ... . . :: . :.:.. .: :: :...:.::.:.:.:.
CCDS14 -QSID-ARFKEIKYRGMFHALFRICKEEGVLALYSGIAPALLRQASYGTIKIGIYQSLKR
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB3 VYTPKGADNSSLTTRILAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTM-
... . :.. : .. : ..:... : :.::::.:.:.::. : ..:.:
CCDS14 LFVERLEDET-LLINMICGVVSGVISSTIANPTDVLKIRMQAQGSL--------FQGSMI
130 140 150 160 170
170 180 190 200 210 220
pF1KB3 DAYRTIAREEGVRGLWKGTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVS
.. : ..::.::::.:..:. .: ::: .:. .::: :..:. .. :.. ::::
CCDS14 GSFIDIYQQEGTRGLWRGVVPTAQRAAIVVGVELPVYDITKKHLILSGMMGDTILTHFVS
180 190 200 210 220 230
230 240 250 260 270
pF1KB3 AFGAGFCATVVASPVDVVKTRYMNSPP--GQ---YFSPLDCMIKMVAQEGPTAFYKGFTP
.: :. ......:::::.::.::. :. : . .: ..:: .:: :.:::: :
CCDS14 SFTCGLAGALASNPVDVVRTRMMNQRAIVGHVDLYKGTVDGILKMWKHEGFFALYKGFWP
240 250 260 270 280 290
280 290 300 310
pF1KB3 SFLRLGSWNVVMFVTYEQLKRALMKVQMLRESPF
..:::: ::...:.:::::::
CCDS14 NWLRLGPWNIIFFITYEQLKRLQI
300 310 320
>>CCDS14623.1 SLC25A14 gene_id:9016|Hs108|chrX (325 aa)
initn: 667 init1: 235 opt: 605 Z-score: 762.5 bits: 149.3 E(32554): 3.8e-36
Smith-Waterman score: 676; 38.8% identity (73.2% similar) in 291 aa overlap (17-299:44-322)
10 20 30 40
pF1KB3 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGE
:. .: :. :.. :::.: .:.:::.::
CCDS14 VKFATAAVIVSGHQKSTTVSHEMSGLNWKPFVYGGLASIVAEFGTFPVDLTKTRLQVQG-
20 30 40 50 60 70
50 60 70 80 90 100
pF1KB3 NQAVQTARL--VQYRGVLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQ
:... ::. ..:::.. ... . . :: . :.:.. .: :: :...:.::.:.:.:.
CCDS14 -QSID-ARFKEIKYRGMFHALFRICKEEGVLALYSGIAPALLRQASYGTIKIGIYQSLKR
80 90 100 110 120 130
110 120 130 140 150 160
pF1KB3 VYTPKGADNSSLTTRILAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTM-
... . :.. : .. : ..:... : :.::::.:.:.::. : ..:.:
CCDS14 LFVERLEDET-LLINMICGVVSGVISSTIANPTDVLKIRMQAQGSL--------FQGSMI
140 150 160 170 180
170 180 190 200 210 220
pF1KB3 DAYRTIAREEGVRGLWKGTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVS
.. : ..::.::::.:..:. .: ::: .:. .::: :..:. .. :.. ::::
CCDS14 GSFIDIYQQEGTRGLWRGVVPTAQRAAIVVGVELPVYDITKKHLILSGMMGDTILTHFVS
190 200 210 220 230 240
230 240 250 260 270
pF1KB3 AFGAGFCATVVASPVDVVKTRYMNSPP--GQ---YFSPLDCMIKMVAQEGPTAFYKGFTP
.: :. ......:::::.::.::. :. : . .: ..:: .:: :.:::: :
CCDS14 SFTCGLAGALASNPVDVVRTRMMNQRAIVGHVDLYKGTVDGILKMWKHEGFFALYKGFWP
250 260 270 280 290 300
280 290 300 310
pF1KB3 SFLRLGSWNVVMFVTYEQLKRALMKVQMLRESPF
..:::: ::...:.:::::::
CCDS14 NWLRLGPWNIIFFITYEQLKRLQI
310 320
>>CCDS31967.1 SLC25A30 gene_id:253512|Hs108|chr13 (291 aa)
initn: 586 init1: 227 opt: 589 Z-score: 743.1 bits: 145.6 E(32554): 4.5e-35
Smith-Waterman score: 669; 38.4% identity (70.6% similar) in 289 aa overlap (17-299:9-288)
10 20 30 40 50 60
pF1KB3 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAVQTARLVQYRG
:. .: :. :. :::.: .:.::::::... .. . ..:::
CCDS31 MSALNWKPFVYGGLASITAECGTFPIDLTKTRLQIQGQTNDAKF-KEIRYRG
10 20 30 40 50
70 80 90 100 110 120
pF1KB3 VLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKGADNSSLTTRI
.: ... . : :: . :.:.. .. :: :...:.:: :.:.:... . :.. : .
CCDS31 MLHALVRIGREEGLKALYSGIAPAMLRQASYGTIKIGTYQSLKRLFIERPEDET-LPINV
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB3 LAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTIAREEGVRGLWK
. : .:... : :.::::.:.:.:: .:. .: . . .: ..::.:::::
CCDS31 ICGILSGVISSTIANPTDVLKIRMQA-------QSNTIQGGMIGNFMNIYQQEGTRGLWK
120 130 140 150 160
190 200 210 220 230 240
pF1KB3 GTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVDV
:. . .: ::: .:. .::: :..:. :. :. ::.:.: :. ......::::
CCDS31 GVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDV
170 180 190 200 210 220
250 260 270 280 290
pF1KB3 VKTRYMNSP---PGQ---YFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLGSWNVVMFVTY
:.::.::. :. : . :::... .:: :.:::: :..:::: ::...::::
CCDS31 VRTRMMNQRVLRDGRCSGYTGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFVTY
230 240 250 260 270 280
300 310
pF1KB3 EQLKRALMKVQMLRESPF
::::.
CCDS31 EQLKKLDL
290
>>CCDS11059.1 SLC25A11 gene_id:8402|Hs108|chr17 (314 aa)
initn: 505 init1: 226 opt: 571 Z-score: 720.1 bits: 141.4 E(32554): 8.7e-34
Smith-Waterman score: 571; 33.7% identity (66.7% similar) in 306 aa overlap (5-304:15-310)
10 20 30 40 50
pF1KB3 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAV
:: : . :::: .: :. : . . ::: .: :.:..::.
CCDS11 MAATASAGAGGIDGKPRTSPKS--VKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEG---
10 20 30 40 50
60 70 80 90 100 110
pF1KB3 QTARLVQYRGVLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKG
:. .:. . .. .....:: . :.:: ::: :: .... :.:.: . . : :
CCDS11 --AKTREYKTSFHALTSILKAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLT--G
60 70 80 90 100 110
120 130 140 150 160
pF1KB3 ADNS--SLTTRILAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRT
::.. .. . . : :.:: .. . :..:. .:. :. .: :. . : :.....:
CCDS11 ADGTPPGFLLKAVIGMTAGATGAFVGTPAEVALIRMTADGRL-PADQRRGYKNVFNALIR
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB3 IAREEGVRGLWKGTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAG
:.::::: ::.: .:.. : ..:: :....:. :. ::: ..::. ::: ... .:
CCDS11 ITREEGVLTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISG
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB3 FCATVVASPVDVVKTRYMN----SPPGQYFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLG
. .:... :::..::: .: . .: . :: ..:.: :: ...::::: . :::
CCDS11 LVTTAASMPVDIAKTRIQNMRMIDGKPEYKNGLDVLFKVVRYEGFFSLWKGFTPYYARLG
240 250 260 270 280 290
290 300 310
pF1KB3 SWNVVMFVTYEQLKRALMKVQMLRESPF
.:. :. ::...: ..
CCDS11 PHTVLTFIFLEQMNKAYKRLFLSG
300 310
312 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 05:18:27 2016 done: Sat Nov 5 05:18:28 2016
Total Scan time: 2.420 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]