FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4565, 702 aa 1>>>pF1KE4565 702 - 702 aa - 702 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.6277+/-0.000423; mu= 23.1442+/- 0.026 mean_var=62.2551+/-12.404, 0's: 0 Z-trim(109.1): 14 B-trim: 41 in 1/52 Lambda= 0.162550 statistics sampled from 17280 (17286) to 17280 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.569), E-opt: 0.2 (0.203), width: 16 Scan time: 9.010 The best scores are: opt bits E(85289) NP_000149 (OMIM: 232500,263570,607839) 1,4-alpha-g ( 702) 4866 1150.6 0 >>NP_000149 (OMIM: 232500,263570,607839) 1,4-alpha-gluca (702 aa) initn: 4866 init1: 4866 opt: 4866 Z-score: 6161.8 bits: 1150.6 E(85289): 0 Smith-Waterman score: 4866; 99.9% identity (100.0% similar) in 702 aa overlap (1-702:1-702) 10 20 30 40 50 60 pF1KE4 MAAPMTPAARPEDYEAALNAALADVPELARLLEIDPYLKPYAVDFQRRYKQFSQILKNIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MAAPMTPAARPEDYEAALNAALADVPELARLLEIDPYLKPYAVDFQRRYKQFSQILKNIG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 ENEGGIDKFSRGYESFGVHRCADGGLYCKEWAPGAEGVFLTGDFNGWNPFSYPYKKLDYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 ENEGGIDKFSRGYESFGVHRCADGGLYCKEWAPGAEGVFLTGDFNGWNPFSYPYKKLDYG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 KWELYIPPKQNKSVLVPHGSKLKVVITSKSGEILYRISPWAKYVVREGDNVNYDWIHWDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 KWELYIPPKQNKSVLVPHGSKLKVVITSKSGEILYRISPWAKYVVREGDNVNYDWIHWDP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 EHSYEFKHSRPKKPRSLRIYESHVGISSHEGKVASYKHFTCNVLPRIKGLGYNCIQLMAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 EHSYEFKHSRPKKPRSLRIYESHVGISSHEGKVASYKHFTCNVLPRIKGLGYNCIQLMAI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 MEHAYYASFGYQITSFFAASSRYGSPEELQELVDTAHSMGIIVLLDVVHSHASKNSADGL ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: NP_000 MEHAYYASFGYQITSFFAASSRYGTPEELQELVDTAHSMGIIVLLDVVHSHASKNSADGL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 NMFDGTDSCYFHSGPRGTHDLWDSRLFAYSSWEVLRFLLSNIRWWLEEYRFDGFRFDGVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 NMFDGTDSCYFHSGPRGTHDLWDSRLFAYSSWEVLRFLLSNIRWWLEEYRFDGFRFDGVT 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 SMLYHHHGVGQGFSGDYSEYFGLQVDEDALTYLMLANHLVHTLCPDSITIAEDVSGMPAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 SMLYHHHGVGQGFSGDYSEYFGLQVDEDALTYLMLANHLVHTLCPDSITIAEDVSGMPAL 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 CSPISQGGGGFDYRLAMAIPDKWIQLLKEFKDEDWNMGDIVYTLTNRRYLEKCIAYAESH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 CSPISQGGGGFDYRLAMAIPDKWIQLLKEFKDEDWNMGDIVYTLTNRRYLEKCIAYAESH 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE4 DQALVGDKSLAFWLMDAEMYTNMSVLTPFTPVIDRGIQLHKMIRLITHGLGGEGYLNFMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 DQALVGDKSLAFWLMDAEMYTNMSVLTPFTPVIDRGIQLHKMIRLITHGLGGEGYLNFMG 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE4 NEFGHPEWLDFPRKGNNESYHYARRQFHLTDDDLLRYKFLNNFDRDMNRLEERYGWLAAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 NEFGHPEWLDFPRKGNNESYHYARRQFHLTDDDLLRYKFLNNFDRDMNRLEERYGWLAAP 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE4 QAYVSEKHEGNKIIAFERAGLLFIFNFHPSKSYTDYRVGTALPGKFKIVLDSDAAEYGGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 QAYVSEKHEGNKIIAFERAGLLFIFNFHPSKSYTDYRVGTALPGKFKIVLDSDAAEYGGH 610 620 630 640 650 660 670 680 690 700 pF1KE4 QRLDHSTDFFSEAFEHNGRPYSLLVYIPSRVALILQNVDLPN :::::::::::::::::::::::::::::::::::::::::: NP_000 QRLDHSTDFFSEAFEHNGRPYSLLVYIPSRVALILQNVDLPN 670 680 690 700 702 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 23:52:56 2016 done: Sat Nov 5 23:52:57 2016 Total Scan time: 9.010 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]