FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4565, 702 aa 1>>>pF1KE4565 702 - 702 aa - 702 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0749+/-0.00102; mu= 20.2820+/- 0.061 mean_var=57.9013+/-11.478, 0's: 0 Z-trim(102.6): 30 B-trim: 0 in 0/50 Lambda= 0.168550 statistics sampled from 7024 (7030) to 7024 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.581), E-opt: 0.2 (0.216), width: 16 Scan time: 3.340 The best scores are: opt bits E(32554) CCDS54612.1 GBE1 gene_id:2632|Hs108|chr3 ( 702) 4865 1191.9 0 >>CCDS54612.1 GBE1 gene_id:2632|Hs108|chr3 (702 aa) initn: 4865 init1: 4865 opt: 4865 Z-score: 6385.1 bits: 1191.9 E(32554): 0 Smith-Waterman score: 4865; 99.7% identity (100.0% similar) in 702 aa overlap (1-702:1-702) 10 20 30 40 50 60 pF1KE4 MAAPMTPAARPEDYEAALNAALADVPELARLLEIDPYLKPYAVDFQRRYKQFSQILKNIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 MAAPMTPAARPEDYEAALNAALADVPELARLLEIDPYLKPYAVDFQRRYKQFSQILKNIG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 ENEGGIDKFSRGYESFGVHRCADGGLYCKEWAPGAEGVFLTGDFNGWNPFSYPYKKLDYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 ENEGGIDKFSRGYESFGVHRCADGGLYCKEWAPGAEGVFLTGDFNGWNPFSYPYKKLDYG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 KWELYIPPKQNKSVLVPHGSKLKVVITSKSGEILYRISPWAKYVVREGDNVNYDWIHWDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 KWELYIPPKQNKSVLVPHGSKLKVVITSKSGEILYRISPWAKYVVREGDNVNYDWIHWDP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 EHSYEFKHSRPKKPRSLRIYESHVGISSHEGKVASYKHFTCNVLPRIKGLGYNCIQLMAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 EHSYEFKHSRPKKPRSLRIYESHVGISSHEGKVASYKHFTCNVLPRIKGLGYNCIQLMAI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 MEHAYYASFGYQITSFFAASSRYGSPEELQELVDTAHSMGIIVLLDVVHSHASKNSADGL ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: CCDS54 MEHAYYASFGYQITSFFAASSRYGTPEELQELVDTAHSMGIIVLLDVVHSHASKNSADGL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 NMFDGTDSCYFHSGPRGTHDLWDSRLFAYSSWEVLRFLLSNIRWWLEEYRFDGFRFDGVT :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: CCDS54 NMFDGTDSCYFHSGPRGTHDLWDSRLFAYSSWEILRFLLSNIRWWLEEYRFDGFRFDGVT 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 SMLYHHHGVGQGFSGDYSEYFGLQVDEDALTYLMLANHLVHTLCPDSITIAEDVSGMPAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 SMLYHHHGVGQGFSGDYSEYFGLQVDEDALTYLMLANHLVHTLCPDSITIAEDVSGMPAL 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 CSPISQGGGGFDYRLAMAIPDKWIQLLKEFKDEDWNMGDIVYTLTNRRYLEKCIAYAESH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 CSPISQGGGGFDYRLAMAIPDKWIQLLKEFKDEDWNMGDIVYTLTNRRYLEKCIAYAESH 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE4 DQALVGDKSLAFWLMDAEMYTNMSVLTPFTPVIDRGIQLHKMIRLITHGLGGEGYLNFMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 DQALVGDKSLAFWLMDAEMYTNMSVLTPFTPVIDRGIQLHKMIRLITHGLGGEGYLNFMG 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE4 NEFGHPEWLDFPRKGNNESYHYARRQFHLTDDDLLRYKFLNNFDRDMNRLEERYGWLAAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 NEFGHPEWLDFPRKGNNESYHYARRQFHLTDDDLLRYKFLNNFDRDMNRLEERYGWLAAP 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE4 QAYVSEKHEGNKIIAFERAGLLFIFNFHPSKSYTDYRVGTALPGKFKIVLDSDAAEYGGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 QAYVSEKHEGNKIIAFERAGLLFIFNFHPSKSYTDYRVGTALPGKFKIVLDSDAAEYGGH 610 620 630 640 650 660 670 680 690 700 pF1KE4 QRLDHSTDFFSEAFEHNGRPYSLLVYIPSRVALILQNVDLPN :::::::::::::::::::::::::::::::::::::::::: CCDS54 QRLDHSTDFFSEAFEHNGRPYSLLVYIPSRVALILQNVDLPN 670 680 690 700 702 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 23:52:55 2016 done: Sat Nov 5 23:52:56 2016 Total Scan time: 3.340 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]