Result of FASTA (ccds) for
pFN21AB3604
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3604, 500 aa
1>>>pF1KB3604 500 - 500 aa - 500 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2725+/-0.000872; mu= 18.3798+/- 0.052
mean_var=66.3555+/-13.210, 0's: 0 Z-trim(106.2): 17 B-trim: 14 in 1/48
Lambda= 0.157448
statistics sampled from 8841 (8851) to 8841 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.656), E-opt: 0.2 (0.272), width: 16
Scan time: 3.010
The best scores are: opt bits E(32554)
CCDS10534.1 ABAT gene_id:18|Hs108|chr16 ( 500) 3406 782.7 0
CCDS54792.1 ETNPPL gene_id:64850|Hs108|chr4 ( 441) 303 77.8 2.7e-14
CCDS82944.1 ETNPPL gene_id:64850|Hs108|chr4 ( 459) 303 77.8 2.8e-14
CCDS54793.1 ETNPPL gene_id:64850|Hs108|chr4 ( 493) 303 77.8 3e-14
CCDS3682.1 ETNPPL gene_id:64850|Hs108|chr4 ( 499) 303 77.9 3e-14
CCDS4434.1 PHYKPL gene_id:85007|Hs108|chr5 ( 450) 267 69.6 7.9e-12
>>CCDS10534.1 ABAT gene_id:18|Hs108|chr16 (500 aa)
initn: 3406 init1: 3406 opt: 3406 Z-score: 4178.6 bits: 782.7 E(32554): 0
Smith-Waterman score: 3406; 100.0% identity (100.0% similar) in 500 aa overlap (1-500:1-500)
10 20 30 40 50 60
pF1KB3 MASMLLAQRLACSFQHSYRLLVPGSRHISQAAAKVDVEFDYDGPLMKTEVPGPRSQELMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MASMLLAQRLACSFQHSYRLLVPGSRHISQAAAKVDVEFDYDGPLMKTEVPGPRSQELMK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 QLNIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALLKLIQQPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QLNIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALLKLIQQPQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 NASMFVNRPALGILPPENFVEKLRQSLLSVAPKGMSQLITMACGSCSNENALKTIFMWYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 NASMFVNRPALGILPPENFVEKLRQSLLSVAPKGMSQLITMACGSCSNENALKTIFMWYR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 SKERGQRGFSQEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 SKERGQRGFSQEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 FDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 FDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 DNHASDDFFRKLRDIARKHGCAFLVDEVQTGGGCTGKFWAHEHWGLDDPADVMTFSKKMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 DNHASDDFFRKLRDIARKHGCAFLVDEVQTGGGCTGKFWAHEHWGLDDPADVMTFSKKMM
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 TGGFFHKEEFRPNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TGGFFHKEEFRPNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 DLQARYPQFISRVRGRGTFCSFDTPDDSIRNKLILIARNKGVVLGGCGDKSIRFRPTLVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 DLQARYPQFISRVRGRGTFCSFDTPDDSIRNKLILIARNKGVVLGGCGDKSIRFRPTLVF
430 440 450 460 470 480
490 500
pF1KB3 RDHHAHLFLNIFSDILADFK
::::::::::::::::::::
CCDS10 RDHHAHLFLNIFSDILADFK
490 500
>>CCDS54792.1 ETNPPL gene_id:64850|Hs108|chr4 (441 aa)
initn: 234 init1: 126 opt: 303 Z-score: 370.1 bits: 77.8 E(32554): 2.7e-14
Smith-Waterman score: 326; 26.6% identity (55.9% similar) in 331 aa overlap (188-496:54-375)
160 170 180 190 200 210
pF1KB3 LITMACGSCSNENALKTIFMWYRSKERGQRGFSQEELETCMINQAPGCPDYSILSFMGAF
: ..: . : : : .... :.
CCDS54 RFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDLALRLARQFRGHQD--VITLDHAY
30 40 50 60 70 80
220 230 240 250 260 270
pF1KB3 HGRTMGCLATTHSKAIHKIDIPSFDWPIAPFP---RLKYPLEEFVKENQQEEARCL-EEV
::. . . . : . :. . .:: : : :: .:.. . : .::
CCDS54 HGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKY------REDHADSASAYADEV
90 100 110 120 130
280 290 300 310 320 330
pF1KB3 EDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDIARKHGCAFLVDEVQTGGG
. .: ... . .:..:.: .:: ::. .:.:. . .. : .:..::::.: :
CCDS54 KKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAGGVFIADEVQVGFG
140 150 160 170 180 190
340 350 360 370 380
pF1KB3 CTGK-FWAHEHWGLDDPADVMTFSKKMMTGG-----FFHKE--EFRPNAPYRIFNTWLGD
.:: ::. . .: : :..:..: : .: :: : .. .. :::. :.
CCDS54 RVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAFSSSGMEYFNTYGGN
200 210 220 230 240 250
390 400 410 420 430 440
pF1KB3 PSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLLDLQARYPQFISRVRGRGTFCSFDTP
: . . :..::. ::: .:: ..:. :: :: : .:. .:: : : ..:
CCDS54 PVSCAVGLAVLDIIENEDLQGNAKRVGN-YLTELLKKQKAKHTLIGDIRGIGLFIGIDLV
260 270 280 290 300 310
450 460 470 480 490
pF1KB3 DDSIR--------NKLILIARNKGVVLGGCGDKS--IRFRPTLVFRDHHAHLFLNIFSDI
: .. ...: ..: :.:.. : . ....: . : .. :..... .. :
CCDS54 KDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKFMVDQLDRI
320 330 340 350 360 370
500
pF1KB3 LADFK
:
CCDS54 LTVLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENPSRKRNGMCTDTHSL
380 390 400 410 420 430
>>CCDS82944.1 ETNPPL gene_id:64850|Hs108|chr4 (459 aa)
initn: 234 init1: 126 opt: 303 Z-score: 369.9 bits: 77.8 E(32554): 2.8e-14
Smith-Waterman score: 339; 25.1% identity (53.2% similar) in 434 aa overlap (85-496:1-393)
60 70 80 90 100 110
pF1KB3 SQELMKQLNIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALLK
. : .:...:: .... : :. ::...:
CCDS82 MFDENGEQYLDCINNVAHV--GHCHPGVVK
10 20
120 130 140 150 160 170
pF1KB3 LIQQPQNASMFVNRPALGILPPENFVEKLRQSLLSVAPKGMSQLITMACGSCSNENALKT
. : . .: : .:.:: .. : .. :. .: :: .:. ::.
CCDS82 AALK-QMELLNTNSRFL----HDNIVEYAKR-LSATLPEKLSVCYFTNSGSEANDLALR-
30 40 50 60 70 80
180 190 200 210 220 230
pF1KB3 IFMWYRSKERGQRGFSQEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIH
. : : : .... :.::. . . . : .
CCDS82 -----------------------LARQFRGHQD--VITLDHAYHGHLSSLIEISPYKFQK
90 100 110
240 250 260 270 280 290
pF1KB3 KIDIPSFDWPIAPFP---RLKYPLEEFVKENQQEEARCL-EEVEDLIVKYRKKKKTVAGI
:. . .:: : : :: .:.. . : .::. .: ... . .:..
CCDS82 GKDVKKEFVHVAPTPDTYRGKY------REDHADSASAYADEVKKIIEDAHNSGRKIAAF
120 130 140 150 160 170
300 310 320 330 340
pF1KB3 IVEPIQSEGGDNHASDDFFRKLRDIARKHGCAFLVDEVQTGGGCTGK-FWAHEHWGLDDP
:.: .:: ::. .:.:. . .. : .:..::::.: : .:: ::. . .: :
CCDS82 IAESMQSCGGQIIPPAGYFQKVAEYVHGAGGVFIADEVQVGFGRVGKHFWSFQMYGEDFV
180 190 200 210 220 230
350 360 370 380 390 400
pF1KB3 ADVMTFSKKMMTGG-----FFHKE--EFRPNAPYRIFNTWLGDPSKNLLLAEVINIIKRE
:..:..: : .: :: : .. .. :::. :.: . . :..::. :
CCDS82 PDIVTMGKPMGNGHPVACVVTTKEIAEAFSSSGMEYFNTYGGNPVSCAVGLAVLDIIENE
240 250 260 270 280 290
410 420 430 440 450
pF1KB3 DLLNNAAHAGKALLTGLLDLQARYPQFISRVRGRGTFCSFDTPDDSIR--------NKLI
:: .:: ..:. :: :: : .:. .:: : : ..: : .. ...:
CCDS82 DLQGNAKRVGN-YLTELLKKQKAKHTLIGDIRGIGLFIGIDLVKDHLKRTPATAEAQHII
300 310 320 330 340
460 470 480 490 500
pF1KB3 LIARNKGVVLGGCGDKS--IRFRPTLVFRDHHAHLFLNIFSDILADFK
..: :.:.. : . ....: . : .. :..... .. ::
CCDS82 YKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKFMVDQLDRILTVLEEAMGTKTESVTS
350 360 370 380 390 400
CCDS82 ENTPCKTKMLKEAHIELLRDSTTDSKENPSRKRNGMCTDTHSLLSKRLKT
410 420 430 440 450
>>CCDS54793.1 ETNPPL gene_id:64850|Hs108|chr4 (493 aa)
initn: 234 init1: 126 opt: 303 Z-score: 369.4 bits: 77.8 E(32554): 3e-14
Smith-Waterman score: 326; 26.6% identity (55.9% similar) in 331 aa overlap (188-496:106-427)
160 170 180 190 200 210
pF1KB3 LITMACGSCSNENALKTIFMWYRSKERGQRGFSQEELETCMINQAPGCPDYSILSFMGAF
: ..: . : : : .... :.
CCDS54 RFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDLALRLARQFRGHQD--VITLDHAY
80 90 100 110 120 130
220 230 240 250 260 270
pF1KB3 HGRTMGCLATTHSKAIHKIDIPSFDWPIAPFP---RLKYPLEEFVKENQQEEARCL-EEV
::. . . . : . :. . .:: : : :: .:.. . : .::
CCDS54 HGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKY------REDHADSASAYADEV
140 150 160 170 180
280 290 300 310 320 330
pF1KB3 EDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDIARKHGCAFLVDEVQTGGG
. .: ... . .:..:.: .:: ::. .:.:. . .. : .:..::::.: :
CCDS54 KKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAGGVFIADEVQVGFG
190 200 210 220 230 240
340 350 360 370 380
pF1KB3 CTGK-FWAHEHWGLDDPADVMTFSKKMMTGG-----FFHKE--EFRPNAPYRIFNTWLGD
.:: ::. . .: : :..:..: : .: :: : .. .. :::. :.
CCDS54 RVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAFSSSGMEYFNTYGGN
250 260 270 280 290 300
390 400 410 420 430 440
pF1KB3 PSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLLDLQARYPQFISRVRGRGTFCSFDTP
: . . :..::. ::: .:: ..:. :: :: : .:. .:: : : ..:
CCDS54 PVSCAVGLAVLDIIENEDLQGNAKRVGN-YLTELLKKQKAKHTLIGDIRGIGLFIGIDLV
310 320 330 340 350 360
450 460 470 480 490
pF1KB3 DDSIR--------NKLILIARNKGVVLGGCGDKS--IRFRPTLVFRDHHAHLFLNIFSDI
: .. ...: ..: :.:.. : . ....: . : .. :..... .. :
CCDS54 KDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKFMVDQLDRI
370 380 390 400 410 420
500
pF1KB3 LADFK
:
CCDS54 LTVLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENPSRKRNGMCTDTHSL
430 440 450 460 470 480
>>CCDS3682.1 ETNPPL gene_id:64850|Hs108|chr4 (499 aa)
initn: 234 init1: 126 opt: 303 Z-score: 369.3 bits: 77.9 E(32554): 3e-14
Smith-Waterman score: 347; 25.3% identity (53.3% similar) in 435 aa overlap (84-496:40-433)
60 70 80 90 100 110
pF1KB3 RSQELMKQLNIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALL
:. : .:...:: .... : :. ::...
CCDS36 TLGLRKKHIGPSCKVFFASDPIKIVRAQRQYMFDENGEQYLDCINNVAHV--GHCHPGVV
10 20 30 40 50 60
120 130 140 150 160 170
pF1KB3 KLIQQPQNASMFVNRPALGILPPENFVEKLRQSLLSVAPKGMSQLITMACGSCSNENALK
: . : . .: : .:.:: .. : .. :. .: :: .:. ::.
CCDS36 KAALK-QMELLNTNSRFLH----DNIVEYAKR-LSATLPEKLSVCYFTNSGSEANDLALR
70 80 90 100 110 120
180 190 200 210 220 230
pF1KB3 TIFMWYRSKERGQRGFSQEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAI
. : : : .... :.::. . . . :
CCDS36 ------------------------LARQFRGHQD--VITLDHAYHGHLSSLIEISPYKFQ
130 140 150
240 250 260 270 280
pF1KB3 HKIDIPSFDWPIAPFP---RLKYPLEEFVKENQQEEARCL-EEVEDLIVKYRKKKKTVAG
. :. . .:: : : :: .:.. . : .::. .: ... . .:.
CCDS36 KGKDVKKEFVHVAPTPDTYRGKY------REDHADSASAYADEVKKIIEDAHNSGRKIAA
160 170 180 190 200
290 300 310 320 330 340
pF1KB3 IIVEPIQSEGGDNHASDDFFRKLRDIARKHGCAFLVDEVQTGGGCTGK-FWAHEHWGLDD
.:.: .:: ::. .:.:. . .. : .:..::::.: : .:: ::. . .: :
CCDS36 FIAESMQSCGGQIIPPAGYFQKVAEYVHGAGGVFIADEVQVGFGRVGKHFWSFQMYGEDF
210 220 230 240 250 260
350 360 370 380 390 400
pF1KB3 PADVMTFSKKMMTGG-----FFHKE--EFRPNAPYRIFNTWLGDPSKNLLLAEVINIIKR
:..:..: : .: :: : .. .. :::. :.: . . :..::.
CCDS36 VPDIVTMGKPMGNGHPVACVVTTKEIAEAFSSSGMEYFNTYGGNPVSCAVGLAVLDIIEN
270 280 290 300 310 320
410 420 430 440 450
pF1KB3 EDLLNNAAHAGKALLTGLLDLQARYPQFISRVRGRGTFCSFDTPDDSIR--------NKL
::: .:: ..:. :: :: : .:. .:: : : ..: : .. ...
CCDS36 EDLQGNAKRVGN-YLTELLKKQKAKHTLIGDIRGIGLFIGIDLVKDHLKRTPATAEAQHI
330 340 350 360 370 380
460 470 480 490 500
pF1KB3 ILIARNKGVVLGGCGDKS--IRFRPTLVFRDHHAHLFLNIFSDILADFK
: ..: :.:.. : . ....: . : .. :..... .. ::
CCDS36 IYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKFMVDQLDRILTVLEEAMGTKTESVT
390 400 410 420 430 440
CCDS36 SENTPCKTKMLKEAHIELLRDSTTDSKENPSRKRNGMCTDTHSLLSKRLKT
450 460 470 480 490
>>CCDS4434.1 PHYKPL gene_id:85007|Hs108|chr5 (450 aa)
initn: 145 init1: 121 opt: 267 Z-score: 325.8 bits: 69.6 E(32554): 7.9e-12
Smith-Waterman score: 331; 24.3% identity (53.3% similar) in 441 aa overlap (80-500:37-437)
50 60 70 80 90 100
pF1KB3 VPGPRSQELMKQLNIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGYSH
..:.:. : .: ...: :... : :. :
CCDS44 PKADTLALRQRLISSSCRLFFPEDPVKIVRAQGQYMYDEQGAEYIDCISNVAHV--GHCH
10 20 30 40 50 60
110 120 130 140 150 160
pF1KB3 PALLKLIQQPQNASMFVNRPALGILPPENFVEKLRQSLLSVAPKGMSQLITMACGSCSNE
: ... .. :: . .: : .:.:. : : . :. . . . :: .:.
CCDS44 PLVVQAAHE-QNQVLNTNSRYLH----DNIVD-YAQRLSETLPEQLCVFYFLNSGSEAND
70 80 90 100 110
170 180 190 200 210 220
pF1KB3 NALKTIFMWYRSKERGQRGFSQEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTH
:: : : .. : : .:. :.::. .. :
CCDS44 LAL-----------RLARHYT-------------GHQDVVVLDH--AYHGH-LSSLIDIS
120 130 140 150
230 240 250 260 270 280
pF1KB3 SKAIHKIDIPSFDW-PIAPFP-RLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTV
....: . .: .::.: . : .: .. . .::. .. . ..: . .
CCDS44 PYKFRNLDGQK-EWVHVAPLPDTYRGPYRE---DHPNPAMAYANEVKRVVSSAQEKGRKI
160 170 180 190 200
290 300 310 320 330 340
pF1KB3 AGIIVEPIQSEGGDNHASDDFFRKLRDIARKHGCAFLVDEVQTGGGCTGK-FWAHEHWGL
:....: . : ::. .: .. . :: : .:..::.:.: : .:: ::: . :
CCDS44 AAFFAESLPSVGGQIIPPAGYFSQVAEHIRKAGGVFVADEIQVGFGRVGKHFWAFQLQGK
210 220 230 240 250 260
350 360 370 380 390
pF1KB3 DDPADVMTFSKKMMTGGFFHK-EEFRPNA------PYRIFNTWLGDPSKNLLLAEVINII
: :..:..:.. .: .: : . :::. :.: . . :.:..
CCDS44 DFVPDIVTMGKSIGNGHPVACVAATQPVARAFEATGVEYFNTFGGSPVSCAVGLAVLNVL
270 280 290 300 310 320
400 410 420 430 440 450
pF1KB3 KREDLLNNAAHAGKALLTGLLDLQARYPQFISRVRGRGTFCSFDT-PDDSIRNKLI----
..:.: ..:. .:. :. : . . ..: ... ::: : : . : :.. :.
CCDS44 EKEQLQDHATSVGSFLMQLLGQQKIKHP-IVGDVRGVGLFIGVDLIKDEATRTPATEEAA
330 340 350 360 370 380
460 470 480 490 500
pF1KB3 -LIARNK-GVVL---GGCGDKSIRFRPTLVFRDHHAHLFLNIFSDILADFK
:..: : . :: : : . ..:.: . : .:. . .. ::.:..
CCDS44 YLVSRLKENYVLLSTDGPGRNILKFKPPMCFSLDNARQVVAKLDAILTDMEEKVRSCETL
390 400 410 420 430 440
CCDS44 RLQP
450
500 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 05:13:34 2016 done: Sat Nov 5 05:13:34 2016
Total Scan time: 3.010 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]