FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4215, 738 aa 1>>>pF1KE4215 738 - 738 aa - 738 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.9638+/-0.00096; mu= 7.4187+/- 0.057 mean_var=130.2897+/-26.122, 0's: 0 Z-trim(108.8): 24 B-trim: 51 in 1/50 Lambda= 0.112362 statistics sampled from 10463 (10477) to 10463 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.678), E-opt: 0.2 (0.322), width: 16 Scan time: 3.610 The best scores are: opt bits E(32554) CCDS69642.1 KIAA1958 gene_id:158405|Hs108|chr9 ( 744) 2809 467.1 4.2e-131 CCDS35108.1 KIAA1958 gene_id:158405|Hs108|chr9 ( 716) 2633 438.6 1.6e-122 >>CCDS69642.1 KIAA1958 gene_id:158405|Hs108|chr9 (744 aa) initn: 2887 init1: 2805 opt: 2809 Z-score: 2467.1 bits: 467.1 E(32554): 4.2e-131 Smith-Waterman score: 2996; 67.9% identity (79.4% similar) in 722 aa overlap (1-674:1-716) 10 20 30 40 50 60 pF1KE4 MEDCLHTSSENLSKLVSWAHSHGTICSLIPNLKHLLSEGSHGNLTAMWGCSAGHAYHWPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 MEDCLHTSSENLSKLVSWAHSHGTICSLIPNLKHLLSEGSHGNLTAMWGCSAGHAYHWPL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 TATCRAGSQERVCFQDNRSFNSDSPSIIGVPSETQTSPVERYPGRPVKAKLDCNRTRDSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 TATCRAGSQERVCFQDNRSFNSDSPSIIGVPSETQTSPVERYPGRPVKAKLDCNRTRDSC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 DFSYCSEPSELDETVEEYEDENTLFDMVCESSVTDEDSDFEPQTQRPQSIARKRPGVVPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 DFSYCSEPSELDETVEEYEDENTLFDMVCESSVTDEDSDFEPQTQRPQSIARKRPGVVPS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 SLHSSSQTQMVDECSNDVIIKKIKQEIPEDYYIVANAELTGGVDGPALSLTQMAKPKPQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 SLHSSSQTQMVDECSNDVIIKKIKQEIPEDYYIVANAELTGGVDGPALSLTQMAKPKPQT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 HAGPSCVGSAKLIPHVTSAISTELDPHGMSASPSVISRPIVQKTARVSLASPNRGPPGTH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 HAGPSCVGSAKLIPHVTSAISTELDPHGMSASPSVISRPIVQKTARVSLASPNRGPPGTH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 GTNQQVAMQMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLPSQVSSCEVALSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 GTNQQVAMQMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLPSQVSSCEVALSPS 310 320 330 340 350 360 370 380 390 400 410 pF1KE4 VNTEPEVSSSQQQPPVAPAITTEATAQCIPDQDERAAELSREQNEKTIRSTQTALRNF-R :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 VNTEPEVSSSQQQPPVAPAITTEATAQCIPDQDERAAELSREQNEKTIRSTQTALRNFPY 370 380 390 400 410 420 420 430 pF1KE4 EFLISKYP---------------------SETR-------------------EIYVIPCK ..:.: . :: .: :: CCDS69 STKLNKFPVFNINDDLNDLCTSAVSPNTTKATRYALNVWRYWCMTNGLKDHTDITKIPAV 430 440 450 460 470 480 440 450 460 470 480 490 pF1KE4 ELDAYLASFFVDARQKDGSEYEPNSLANYQCGLERYLKEHRYGYSITRDKEFKRSQEALK .:. : .:.: ....:::.. .:: . ::.: ::. :.::: .. :. : . :: CCDS69 KLNELLENFYVTVKKSDGSDFLATSLHAIRRGLDRILKNAGVGFSIT-SSTFSSSTKKLK 490 500 510 520 530 500 510 520 530 540 550 pF1KE4 QKQIELRCKG-KGNKPHKSMKLTFADELILRKRGLLSRYNPEGLLNLVWLNNTKAFGHCT .: : : .: . .. . ....:: . . : :. .: ::. : :.. .. : CCDS69 EKLWVLSKAGMSGARSRNIVYFSLSDEEEMWQAGCLGDDSPITLLSTVVKYNSQYLNMRT 540 550 560 570 580 590 560 570 580 590 600 610 pF1KE4 GFHGSTLKWGDIRLRVTETGLEYLEWMGQDTGDLNAKTKRGGT---DSRVYATQ-HAPQT . . : .:::.: . :. : ... ... :.: ...: . .. . CCDS69 LQEHADLMYGDIELLKDPQNQPYFA----RTDSVKRESRSGSTRVCHGKIYHEHSRGHKQ 600 610 620 630 640 650 620 630 640 650 660 670 pF1KE4 CPV-QDYKEYAQRRPPAMRYEDAPFYLSI-KPVVNLAALHWYNCQALGKNKLAKMVKTMC :: :: . .:::.. .::::. : ....... ::. : .: .: .: .. CCDS69 CPYCLLYKYMYIHRPPTQMEAKSPFYLTARKEATDMGSV-WYEEQRMGLRSLRGIVPNLA 660 670 680 690 700 710 680 690 700 710 720 730 pF1KE4 EKGNIPGRKTNFSVYQSCSTLSEAQSNQLVLICNNLSQQAAQSVAGHSNNGNFIVSASYD .: CCDS69 KKVKLENCENFTFVSFTQVSRRLGSHSCCQ 720 730 740 >>CCDS35108.1 KIAA1958 gene_id:158405|Hs108|chr9 (716 aa) initn: 2895 init1: 2633 opt: 2633 Z-score: 2313.2 bits: 438.6 E(32554): 1.6e-122 Smith-Waterman score: 2889; 66.9% identity (80.8% similar) in 694 aa overlap (1-674:1-688) 10 20 30 40 50 60 pF1KE4 MEDCLHTSSENLSKLVSWAHSHGTICSLIPNLKHLLSEGSHGNLTAMWGCSAGHAYHWPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 MEDCLHTSSENLSKLVSWAHSHGTICSLIPNLKHLLSEGSHGNLTAMWGCSAGHAYHWPL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 TATCRAGSQERVCFQDNRSFNSDSPSIIGVPSETQTSPVERYPGRPVKAKLDCNRTRDSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 TATCRAGSQERVCFQDNRSFNSDSPSIIGVPSETQTSPVERYPGRPVKAKLDCNRTRDSC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 DFSYCSEPSELDETVEEYEDENTLFDMVCESSVTDEDSDFEPQTQRPQSIARKRPGVVPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 DFSYCSEPSELDETVEEYEDENTLFDMVCESSVTDEDSDFEPQTQRPQSIARKRPGVVPS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 SLHSSSQTQMVDECSNDVIIKKIKQEIPEDYYIVANAELTGGVDGPALSLTQMAKPKPQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 SLHSSSQTQMVDECSNDVIIKKIKQEIPEDYYIVANAELTGGVDGPALSLTQMAKPKPQT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 HAGPSCVGSAKLIPHVTSAISTELDPHGMSASPSVISRPIVQKTARVSLASPNRGPPGTH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 HAGPSCVGSAKLIPHVTSAISTELDPHGMSASPSVISRPIVQKTARVSLASPNRGPPGTH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 GTNQQVAMQMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLPSQVSSCEVALSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 GTNQQVAMQMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLPSQVSSCEVALSPS 310 320 330 340 350 360 370 380 390 400 pF1KE4 VNTEPEVSSSQQQPPVAPAITTEATAQCIPDQDERAAE-----LSREQNE--------KT :::::::::::::::::::::::::::::: . . . .. . :. .: CCDS35 VNTEPEVSSSQQQPPVAPAITTEATAQCIPAYSTKLNKFPVFNINDDLNDLCTSAVSPNT 370 380 390 400 410 420 410 420 430 440 450 460 pF1KE4 IRSTQTALRNFREFLISKYPSETREIYVIPCKELDAYLASFFVDARQKDGSEYEPNSLAN ..:. :: .: . ... .. .: :: .:. : .:.: ....:::.. .:: CCDS35 TKATRYALNVWRYWCMTNGLKDHTDITKIPAVKLNELLENFYVTVKKSDGSDFLATSLHA 430 440 450 460 470 480 470 480 490 500 510 520 pF1KE4 YQCGLERYLKEHRYGYSITRDKEFKRSQEALKQKQIELRCKG-KGNKPHKSMKLTFADEL . ::.: ::. :.::: .. :. : . ::.: : : .: . .. . ....:: CCDS35 IRRGLDRILKNAGVGFSIT-SSTFSSSTKKLKEKLWVLSKAGMSGARSRNIVYFSLSDEE 490 500 510 520 530 530 540 550 560 570 580 pF1KE4 ILRKRGLLSRYNPEGLLNLVWLNNTKAFGHCTGFHGSTLKWGDIRLRVTETGLEYLEWMG . . : :. .: ::. : :.. .. : . . : .:::.: . :. CCDS35 EMWQAGCLGDDSPITLLSTVVKYNSQYLNMRTLQEHADLMYGDIELLKDPQNQPYFA--- 540 550 560 570 580 590 590 600 610 620 630 640 pF1KE4 QDTGDLNAKTKRGGT---DSRVYATQ-HAPQTCPV-QDYKEYAQRRPPAMRYEDAPFYLS : ... ... :.: ...: . .. . :: :: . .:::.. .::::. CCDS35 -RTDSVKRESRSGSTRVCHGKIYHEHSRGHKQCPYCLLYKYMYIHRPPTQMEAKSPFYLT 600 610 620 630 640 650 650 660 670 680 690 700 pF1KE4 I-KPVVNLAALHWYNCQALGKNKLAKMVKTMCEKGNIPGRKTNFSVYQSCSTLSEAQSNQ : ....... ::. : .: .: .: .. .: CCDS35 ARKEATDMGSV-WYEEQRMGLRSLRGIVPNLAKKVKLENCENFTFVSFTQVSRRLGSHSC 660 670 680 690 700 710 710 720 730 pF1KE4 LVLICNNLSQQAAQSVAGHSNNGNFIVSASYDSSSDTA CCDS35 CQ 738 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 01:26:13 2016 done: Sun Nov 6 01:26:14 2016 Total Scan time: 3.610 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]