Result of FASTA (ccds) for
pFN21AE0925
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0925, 328 aa
1>>>pF1KE0925 328 - 328 aa - 328 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.5235+/-0.00101; mu= 10.3228+/- 0.061
mean_var=87.8902+/-16.879, 0's: 0 Z-trim(105.4): 24 B-trim: 0 in 0/51
Lambda= 0.136806
statistics sampled from 8400 (8412) to 8400 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.624), E-opt: 0.2 (0.258), width: 16
Scan time: 1.940
The best scores are: opt bits E(32554)
CCDS55668.1 UCHL5 gene_id:51377|Hs108|chr1 ( 328) 2159 436.1 1.8e-122
CCDS1378.1 UCHL5 gene_id:51377|Hs108|chr1 ( 329) 2147 433.8 9.4e-122
CCDS55669.1 UCHL5 gene_id:51377|Hs108|chr1 ( 316) 2082 420.9 6.6e-118
CCDS55670.1 UCHL5 gene_id:51377|Hs108|chr1 ( 326) 2076 419.7 1.5e-117
CCDS2853.1 BAP1 gene_id:8314|Hs108|chr3 ( 729) 583 125.2 1.6e-28
CCDS9453.1 UCHL3 gene_id:7347|Hs108|chr13 ( 230) 299 69.0 4.3e-12
>>CCDS55668.1 UCHL5 gene_id:51377|Hs108|chr1 (328 aa)
initn: 2159 init1: 2159 opt: 2159 Z-score: 2312.2 bits: 436.1 E(32554): 1.8e-122
Smith-Waterman score: 2159; 100.0% identity (100.0% similar) in 328 aa overlap (1-328:1-328)
10 20 30 40 50 60
pF1KE0 MTGNAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MTGNAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 GEEPAGSVVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GEEPAGSVVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 FDAAMKGLALSNSDVIRQVHNSFARQQMFEFDTKTSAKEEDAFHFVSYVPVNGRLYELDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FDAAMKGLALSNSDVIRQVHNSFARQQMFEFDTKTSAKEEDAFHFVSYVPVNGRLYELDG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 LREGPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LREGPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 QLAEEPMDTDQGNSMLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 QLAEEPMDTDQGNSMLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLK
250 260 270 280 290 300
310 320
pF1KE0 TLAEHQQLIPLVEKAKEKQNAKKAQETK
::::::::::::::::::::::::::::
CCDS55 TLAEHQQLIPLVEKAKEKQNAKKAQETK
310 320
>>CCDS1378.1 UCHL5 gene_id:51377|Hs108|chr1 (329 aa)
initn: 1669 init1: 1639 opt: 2147 Z-score: 2299.3 bits: 433.8 E(32554): 9.4e-122
Smith-Waterman score: 2147; 99.7% identity (99.7% similar) in 329 aa overlap (1-328:1-329)
10 20 30 40 50 60
pF1KE0 MTGNAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MTGNAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 GEEPAGSVVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 GEEPAGSVVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 FDAAMKGLALSNSDVIRQVHNSFARQQMFEFDTKTSAKEEDAFHFVSYVPVNGRLYELDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 FDAAMKGLALSNSDVIRQVHNSFARQQMFEFDTKTSAKEEDAFHFVSYVPVNGRLYELDG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 LREGPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LREGPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR
190 200 210 220 230 240
250 260 270 280 290
pF1KE0 QLAEE-PMDTDQGNSMLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELL
::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 QLAEEEPMDTDQGNSMLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELL
250 260 270 280 290 300
300 310 320
pF1KE0 KTLAEHQQLIPLVEKAKEKQNAKKAQETK
:::::::::::::::::::::::::::::
CCDS13 KTLAEHQQLIPLVEKAKEKQNAKKAQETK
310 320
>>CCDS55669.1 UCHL5 gene_id:51377|Hs108|chr1 (316 aa)
initn: 2108 init1: 2082 opt: 2082 Z-score: 2230.3 bits: 420.9 E(32554): 6.6e-118
Smith-Waterman score: 2082; 99.7% identity (100.0% similar) in 316 aa overlap (1-316:1-316)
10 20 30 40 50 60
pF1KE0 MTGNAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MTGNAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 GEEPAGSVVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GEEPAGSVVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 FDAAMKGLALSNSDVIRQVHNSFARQQMFEFDTKTSAKEEDAFHFVSYVPVNGRLYELDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FDAAMKGLALSNSDVIRQVHNSFARQQMFEFDTKTSAKEEDAFHFVSYVPVNGRLYELDG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 LREGPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LREGPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 QLAEEPMDTDQGNSMLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 QLAEEPMDTDQGNSMLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLK
250 260 270 280 290 300
310 320
pF1KE0 TLAEHQQLIPLVEKAKEKQNAKKAQETK
::::::::::::::.:
CCDS55 TLAEHQQLIPLVEKGK
310
>>CCDS55670.1 UCHL5 gene_id:51377|Hs108|chr1 (326 aa)
initn: 2076 init1: 2076 opt: 2076 Z-score: 2223.7 bits: 419.7 E(32554): 1.5e-117
Smith-Waterman score: 2076; 100.0% identity (100.0% similar) in 314 aa overlap (1-314:1-314)
10 20 30 40 50 60
pF1KE0 MTGNAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MTGNAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 GEEPAGSVVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GEEPAGSVVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 FDAAMKGLALSNSDVIRQVHNSFARQQMFEFDTKTSAKEEDAFHFVSYVPVNGRLYELDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FDAAMKGLALSNSDVIRQVHNSFARQQMFEFDTKTSAKEEDAFHFVSYVPVNGRLYELDG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 LREGPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LREGPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 QLAEEPMDTDQGNSMLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 QLAEEPMDTDQGNSMLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLK
250 260 270 280 290 300
310 320
pF1KE0 TLAEHQQLIPLVEKAKEKQNAKKAQETK
::::::::::::::
CCDS55 TLAEHQQLIPLVEKFEKHFEKTLLGK
310 320
>>CCDS2853.1 BAP1 gene_id:8314|Hs108|chr3 (729 aa)
initn: 725 init1: 149 opt: 583 Z-score: 625.5 bits: 125.2 E(32554): 1.6e-28
Smith-Waterman score: 644; 40.8% identity (68.2% similar) in 289 aa overlap (4-272:2-284)
10 20 30 40 50 60
pF1KE0 MTGNAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQP
: : : .:::::.:: :.. :: .:.:::::..:. . ::.:.::::::
CCDS28 MNKG-WLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKC---QGPVYGFIFLFKWIE
10 20 30 40 50
70 80 90 100 110
pF1KE0 GEEPA---------GSVVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETL
.. ::..:. ....:::.:.: :.:::.:..::::::. .: :: ::
CCDS28 ERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCS--SVDLGPTL
60 70 80 90 100 110
120 130 140 150 160
pF1KE0 SEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQMFEFDTK----TSAKEEDAFHFVS
:..:.:...:. :: :..:. . ..::: :: . .. : .... .::::::
CCDS28 SRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAFHFVS
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE0 YVPVNGRLYELDGLREGPIDLGACNQDD-WISAVRPVIEKRIQKYSEGE----IRFNLMA
:::..:::.:::::. ::: : ..:. : . .: :: .:: . :: :::::::
CCDS28 YVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRFNLMA
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE0 IVSDRKMIYEQKIAELQ--RQLAEEPMDTDQGNSMLSAIQSEVAKNQMLIEEEVQKLKRY
.: ::.. :: .. :. :: . : .. .. ::.. .....: ::
CCDS28 VVPDRRIKYEARLHVLKVNRQTVLEALQQLIRVTQPELIQTHKSQESQLPEESKSASNKS
240 250 260 270 280 290
290 300 310 320
pF1KE0 KIENIRRKHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNAKKAQETK
CCDS28 PLVLEANRAPAASEGNHTDGAEEAAGSCAQAPSHSPPNKPKLVVKPPGSSLNGVHPNPTP
300 310 320 330 340 350
>>CCDS9453.1 UCHL3 gene_id:7347|Hs108|chr13 (230 aa)
initn: 177 init1: 98 opt: 299 Z-score: 330.6 bits: 69.0 E(32554): 4.3e-12
Smith-Waterman score: 299; 29.4% identity (62.3% similar) in 228 aa overlap (8-223:6-227)
10 20 30 40 50
pF1KE0 MTGNAGEWCLMESDPGVFTELIKGFGCRGA-QVEEIWSLEPENFEKL-KPVHGLIFLF--
: .:..: : ....: .: . : ......:: . . .:: ....::
CCDS94 MEGQRWLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMDPELLSMVPRPVCAVLLLFPI
10 20 30 40 50
60 70 80 90 100
pF1KE0 --KWQ----PGEEPAGSVVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHL--G
:.. :: : :: ....: ::.:.:::.: ... .. : ... .:. :
CCDS94 TEKYEVFRTEEEEKIKSQGQDVT-SSVYFMKQTISNACGTIGLIHAIAN-NKDKMHFESG
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE0 ETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQMFEFDTKTSAKEEDAFHFVSY
::..: : : :.. .. : : :.:: .:.. :.. . : : :. .::..
CCDS94 STLKKFLEESVSMSPEERARYLENYDAIRVTHETSAHEGQTE---APSIDEKVDLHFIAL
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE0 VPVNGRLYELDGLREGPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRK
: :.:.:::::: . ::. : ... . . : .: ... . :.::: .:.
CCDS94 VHVDGHLYELDGRKPFPINHGETSDETLLEDAIEVCKKFMER-DPDELRFNAIALSAA
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE0 MIYEQKIAELQRQLAEEPMDTDQGNSMLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRK
328 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 04:31:59 2016 done: Sat Nov 5 04:31:59 2016
Total Scan time: 1.940 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]